Data search


search
Exact
Search

Results for MligTC455_21186

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21186 476 9.91 Mlig455_002574

Neo: -

Age: -

FUNDC1 Mlig455_002574 {REF} {Length: 6061} {TRANSSPLICED} {Pfam: FUN14 family [PF04930.17, score=53.5]} {Human: ENSG00000069509, FUNDC1, FUN14 domain containing 1, [Score=62.0, Expect=2e-11]} {Mouse: ENSMUSG00000025040, Fundc1, FUN14 domain containing 1, [Score=60.1, Expect=6e-11]} {RNA1509_23346, RNA1509_46845} {RNA1310_46845, RNA1509_23346, RNA1509_46845} {RNA1509_23346, RNA1509_46845, RNA815_27475}

Cumulative graph for MligTC455_21186

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.021 3.57 0.98075 1.00000
RegionR2 0.244 3.57 0.60149 0.95162
RegionR3 -0.104 3.57 0.76540 1.00000
RegionR4 -0.742 3.57 0.08014 0.26523
RegionR5 0.07 3.57 0.81515 1.00000
RegionR6 0.199 3.57 0.57403 1.00000
RegionR7 0.174 3.57 0.70832 1.00000
RegionR8 0.181 3.57 0.74896 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.258 3.57 0.15446 0.89657
RegenerationR2 0.198 3.57 0.61588 0.92196
RegenerationR3 0.325 3.57 0.45164 0.83282
RegenerationR4 0.436 3.57 0.31906 0.75726
RegenerationR5 0.478 3.57 0.18460 0.61496
RegenerationR6 -0.281 3.57 0.55461 0.84197
RegenerationBL -2.038 3.57 0.01872 0.14720
RegenerationTP -0.339 3.57 0.58481 0.95241


Genes with expression patterns similar to MligTC455_21186

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21186 476 9.91 Mlig455_002574

Neo: -

Age: -

FUNDC1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_002574 {REF} {Length: 6061} {TRANSSPLICED} {Pfam: FUN14 family [PF04930.17, score=53.5]} {Human: ENSG00000069509, FUNDC1, FUN14 domain containing 1, [Score=62.0, Expect=2e-11]} {Mouse: ENSMUSG00000025040, Fundc1, FUN14 domain containing 1, [Score=60.1, Expect=6e-11]} {RNA1509_23346, RNA1509_46845} {RNA1310_46845, RNA1509_23346, RNA1509_46845} {RNA1509_23346, RNA1509_46845, RNA815_27475}
2. MligTC455_46012 1732 36.08 Mlig455_034541, Mlig455_034582, Mlig455_070433

Neo: -

Age: -

PI4K2B 2.548 - - - 0.772 0.821 0.955

Mlig455_034541 {REF} {Length: 3994} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=185.8]} {Human: ENSG00000038210, PI4K2B, phosphatidylinositol 4-kinase type 2 beta, [RH, Score=494, Expect=4e-172]; ENSG00000281028, AC104662.2, phosphatidylinositol 4-kinase type 2 beta, [RH, Score=493, Expect=7e-173]; ENSG00000155252, PI4K2A, phosphatidylinositol 4-kinase type 2 alpha, [RH, Score=483, Expect=9e-168]} {Mouse: ENSMUSG00000029186, Pi4k2b, phosphatidylinositol 4-kinase type 2 beta, [RH, Score=497, Expect=1e-173]; ENSMUSG00000025178, Pi4k2a, phosphatidylinositol 4-kinase type 2 alpha, [RH, Score=478, Expect=7e-166]} {Dmel: FBgn0037339, Pi4KIIalpha, [Score=369, Expect=3e-120]} {Celegans: WBGene00022501, ZC8.6, [RH, Score=404, Expect=9e-136]} {Smed: dd_Smed_v6_10985_0_1, dd_Smed_v6_10985_0_1, [RH, Score=496, Expect=1e-173]} {RNA1509_16350} {RNA1310_17970} {RNA815_2446}

Mlig455_034582 {REF} {Length: 4206} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=160.8]} {Human: ENSG00000038210, PI4K2B, phosphatidylinositol 4-kinase type 2 beta, [Score=454, Expect=2e-156]; ENSG00000281028, AC104662.2, phosphatidylinositol 4-kinase type 2 beta, [Score=452, Expect=2e-157]; ENSG00000155252, PI4K2A, phosphatidylinositol 4-kinase type 2 alpha, [Score=447, Expect=6e-154]} {Mouse: ENSMUSG00000029186, Pi4k2b, phosphatidylinositol 4-kinase type 2 beta, [Score=460, Expect=3e-159]; ENSMUSG00000025178, Pi4k2a, phosphatidylinositol 4-kinase type 2 alpha, [Score=442, Expect=3e-152]} {Dmel: FBgn0037339, Pi4KIIalpha, [Score=298, Expect=3e-93]} {Celegans: WBGene00022501, ZC8.6, [Score=369, Expect=3e-122]} {Smed: dd_Smed_v6_10985_0_1, dd_Smed_v6_10985_0_1, [Score=459, Expect=2e-159]} {RNA1509_47380} {RNA1310_17970} {RNA815_2446}

Mlig455_070433 {REF} {Length: 3997} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=185.1]} {Human: ENSG00000038210, PI4K2B, phosphatidylinositol 4-kinase type 2 beta, [RH, Score=494, Expect=7e-172]; ENSG00000281028, AC104662.2, phosphatidylinositol 4-kinase type 2 beta, [RH, Score=491, Expect=2e-172]; ENSG00000155252, PI4K2A, phosphatidylinositol 4-kinase type 2 alpha, [RH, Score=482, Expect=2e-167]} {Mouse: ENSMUSG00000029186, Pi4k2b, phosphatidylinositol 4-kinase type 2 beta, [RH, Score=496, Expect=5e-173]; ENSMUSG00000025178, Pi4k2a, phosphatidylinositol 4-kinase type 2 alpha, [RH, Score=477, Expect=1e-165]} {Dmel: FBgn0037339, Pi4KIIalpha, [Score=368, Expect=4e-120]} {Celegans: WBGene00022501, ZC8.6, [RH, Score=404, Expect=1e-135]} {Smed: dd_Smed_v6_10985_0_1, dd_Smed_v6_10985_0_1, [RH, Score=493, Expect=2e-172]} {RNA1509_16350} {RNA1310_17970, RNA1509_16350} {RNA1509_16350, RNA815_2446}
3. MligTC455_42906 262 5.47 Mlig455_031588

Neo: -

Age: -

EIF2B2 0.959 - - - - - 0.959 Mlig455_031588 {REF} {Length: 1983} {TRANSSPLICED} {Pfam: Initiation factor 2 subunit family [PF01008.19, score=141.4]} {Human: ENSG00000119718, EIF2B2, eukaryotic translation initiation factor 2B subunit beta, [RH, Score=204, Expect=1e-62]} {Mouse: ENSMUSG00000004788, Eif2b2, eukaryotic translation initiation factor 2B, subunit 2 beta, [RH, Score=205, Expect=4e-63]} {Dmel: FBgn0024996, eIF2Bbeta, eukaryotic translation initiation factor 2B subunit beta, [RH, Score=172, Expect=1e-50]} {Celegans: WBGene00012950, eif-2Bbeta, Eukaryotic Initiation Factor, [RH, Score=75.9, Expect=3e-15]} {Smed: dd_Smed_v6_6270_0_1, dd_Smed_v6_6270_0_1, [RH, Score=120, Expect=2e-31]} {RNA1509_13413, RNA1509_31218, RNA1509_40325, RNA1509_51782} {RNA1310_33419, RNA1509_13413, RNA1509_31218, RNA1509_40325, RNA1509_51782} {RNA1509_13413, RNA1509_31218, RNA1509_40325, RNA1509_51782, RNA815_14402}
4. MligTC455_26498 16790 349.8 Mlig455_012463

Neo: -

Age: -

Region-enriched R3: 1.143/0.02974

0.956 - - - 0.956 - - Mlig455_012463 {REF} {Length: 522} {TRANSSPLICED} {Pfam: Translation machinery associated TMA7 [PF09072.12, score=68.0]} {Smed: dd_Smed_v6_563_0_1, dd_Smed_v6_563_0_1, [RH, Score=66.2, Expect=4e-15]} {RNA1509_6941} {RNA1310_24480.1} {RNA815_481.1}
5. MligTC455_07914 285 5.94 Mlig455_032141

Neo: -

Age: logFC(26M/2M)=0.198

PRKAB2 0.955 - - - - - 0.955 Mlig455_032141 {REF} {Length: 2463} {TRANSSPLICED} {Pfam: Glycogen recognition site of AMP-activated protein kinase [PF16561.7, score=104.2]; 5'-AMP-activated protein kinase beta subunit, interaction domain [PF04739.17, score=88.5]; Carbohydrate-binding module 48 (Isoamylase N-terminal domain) [PF02922.20, score=22.6]} {Human: ENSG00000131791, PRKAB2, protein kinase AMP-activated non-catalytic subunit beta 2, [RH, Score=228, Expect=1e-73]; ENSG00000111725, PRKAB1, protein kinase AMP-activated non-catalytic subunit beta 1, [RH, Score=225, Expect=2e-72]} {Mouse: ENSMUSG00000029513, Prkab1, protein kinase, AMP-activated, beta 1 non-catalytic subunit, [RH, Score=227, Expect=1e-73]; ENSMUSG00000038205, Prkab2, protein kinase, AMP-activated, beta 2 non-catalytic subunit, [RH, Score=226, Expect=4e-73]} {Dmel: FBgn0260972, alc, alicorn, [RH, Score=202, Expect=4e-63]} {Celegans: WBGene00010115, aakb-1, AMP-Activated Kinase Beta subunit, [Score=196, Expect=6e-62]} {Smed: dd_Smed_v6_4735_0_1, dd_Smed_v6_4735_0_1, [RH, Score=222, Expect=3e-71]} {RNA1509_18405, RNA1509_28206, RNA1509_40331} {RNA1310_19660.1, RNA1509_18405, RNA1509_28206, RNA1509_40331} {RNA1509_18405, RNA1509_28206, RNA1509_40331, RNA815_7484}
6. MligTC455_26499 50486 1051.78 Mlig455_012568, Mlig455_012570, Mlig455_012572

Neo: -

Age: Down-Down-Up

Region-enriched R3: 1.102/0.04740

0.955 - - - 0.955 - -

Mlig455_012568 {REF} {Length: 517} {TRANSSPLICED} {Pfam: Translation machinery associated TMA7 [PF09072.12, score=68.0]} {Smed: dd_Smed_v6_563_0_1, dd_Smed_v6_563_0_1, [RH, Score=66.2, Expect=4e-15]} {RNA1509_6941} {RNA1310_24480.1} {RNA815_481.1}

Mlig455_012570 {REF} {Length: 517} {TRANSSPLICED} {Pfam: Translation machinery associated TMA7 [PF09072.12, score=68.0]} {Smed: dd_Smed_v6_563_0_1, dd_Smed_v6_563_0_1, [RH, Score=66.2, Expect=4e-15]} {RNA1509_6941} {RNA1310_24480.1} {RNA815_481.1}

Mlig455_012572 {REF} {Length: 939} {TRANSSPLICED} {Pfam: Translation machinery associated TMA7 [PF09072.12, score=67.2]} {Smed: dd_Smed_v6_563_0_1, dd_Smed_v6_563_0_1, [RH, Score=66.6, Expect=7e-15]} {RNA1509_15612, RNA1509_32962, RNA1509_40781, RNA1509_46060, RNA1509_58043, RNA1509_6941} {RNA1310_24480.1, RNA1509_15612, RNA1509_32962, RNA1509_40781, RNA1509_46060, RNA1509_58043} {RNA1509_15612, RNA1509_32962, RNA1509_40781, RNA1509_46060, RNA1509_58043, RNA815_481.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA