TomoSeq data search

Data search

Results for MligTC455_42906

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42906

262

5.47

Mlig455_031588

Neo: -

Age: -

EIF2B2

Mlig455_031588 {REF} {Length: 1983} {TRANSSPLICED} {Pfam: Initiation factor 2 subunit family [PF01008.19, score=141.4]} {Human: ENSG00000119718, EIF2B2, eukaryotic translation initiation factor 2B subunit beta, [RH, Score=204, Expect=1e-62]} {Mouse: ENSMUSG00000004788, Eif2b2, eukaryotic translation initiation factor 2B, subunit 2 beta, [RH, Score=205, Expect=4e-63]} {Dmel: FBgn0024996, eIF2Bbeta, eukaryotic translation initiation factor 2B subunit beta, [RH, Score=172, Expect=1e-50]} {Celegans: WBGene00012950, eif-2Bbeta, Eukaryotic Initiation Factor, [RH, Score=75.9, Expect=3e-15]} {Smed: dd_Smed_v6_6270_0_1, dd_Smed_v6_6270_0_1, [RH, Score=120, Expect=2e-31]} {RNA1509_13413, RNA1509_31218, RNA1509_40325, RNA1509_51782} {RNA1310_33419, RNA1509_13413, RNA1509_31218, RNA1509_40325, RNA1509_51782} {RNA1509_13413, RNA1509_31218, RNA1509_40325, RNA1509_51782, RNA815_14402}

Cumulative graph for MligTC455_42906

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.978	3.068	0.54256	1.00000
RegionR2	0.875	3.068	0.21810	0.58612
RegionR3	-0.236	3.068	0.65647	1.00000
RegionR4	-0.964	3.068	0.17221	0.43677
RegionR5	1.06	3.068	0.00999	0.05769
RegionR6	0.139	3.068	0.79261	1.00000
RegionR7	-0.358	3.068	0.65805	1.00000
RegionR8	0.462	3.068	0.59637	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.828	3.068	0.53507	1.00000
RegenerationR2	-0.256	3.068	0.64787	0.93520
RegenerationR3	1.023	3.068	0.09834	0.50161
RegenerationR4	0.172	3.068	0.79825	0.98564
RegenerationR5	0.051	3.068	0.90132	1.00000
RegenerationR6	0.2	3.068	0.75271	0.95340
RegenerationBL	1.335	3.068	0.07043	0.30896
RegenerationTP	-0.119	3.068	0.89705	1.00000

Genes with expression patterns similar to MligTC455_42906

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42906	262	5.47	Mlig455_031588	Neo: - Age: -	EIF2B2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_031588 {REF} {Length: 1983} {TRANSSPLICED} {Pfam: Initiation factor 2 subunit family [PF01008.19, score=141.4]} {Human: ENSG00000119718, EIF2B2, eukaryotic translation initiation factor 2B subunit beta, [RH, Score=204, Expect=1e-62]} {Mouse: ENSMUSG00000004788, Eif2b2, eukaryotic translation initiation factor 2B, subunit 2 beta, [RH, Score=205, Expect=4e-63]} {Dmel: FBgn0024996, eIF2Bbeta, eukaryotic translation initiation factor 2B subunit beta, [RH, Score=172, Expect=1e-50]} {Celegans: WBGene00012950, eif-2Bbeta, Eukaryotic Initiation Factor, [RH, Score=75.9, Expect=3e-15]} {Smed: dd_Smed_v6_6270_0_1, dd_Smed_v6_6270_0_1, [RH, Score=120, Expect=2e-31]} {RNA1509_13413, RNA1509_31218, RNA1509_40325, RNA1509_51782} {RNA1310_33419, RNA1509_13413, RNA1509_31218, RNA1509_40325, RNA1509_51782} {RNA1509_13413, RNA1509_31218, RNA1509_40325, RNA1509_51782, RNA815_14402}
2.	MligTC455_22252	465	9.7	Mlig455_023950	Neo: Int S/G2/M Age: - Regeneration-upregulated R6: 2.325 Regeneration-enriched R6: 2.325	UTP18	1.796	-	-	-	-	0.954	0.842	Mlig455_023950 {REF} {Length: 2924} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=41.6]; WD domain, G-beta repeat [PF00400.34, score=33.2]} {Human: ENSG00000011260, UTP18, UTP18, small subunit processome component, [RH, Score=191, Expect=1e-53]} {Mouse: ENSMUSG00000054079, Utp18, UTP18 small subunit processome component, [RH, Score=189, Expect=6e-53]} {Dmel: FBgn0262560, wcd, wicked, [RH, Score=157, Expect=3e-42]} {Celegans: WBGene00015104, B0280.9, U3 small nucleolar RNA-associated protein 18 homolog, [Score=99.4, Expect=3e-22]} {Smed: dd_Smed_v6_3855_0_1, dd_Smed_v6_3855_0_1, [RH, Score=105, Expect=1e-24]} {RNA1509_17950, RNA1509_23677, RNA1509_35462, RNA1509_52248} {RNA1310_20176.1, RNA1509_17950, RNA1509_23677, RNA1509_35462, RNA1509_52248} {RNA1509_17950, RNA1509_23677, RNA1509_35462, RNA1509_52248, RNA815_4217.1}
3.	MligTC455_47972	364	7.58	Mlig455_039235	Neo: - Age: - Region-enriched R5: 1.500/0.00401		1.702	-	-	0.750	-	-	0.952	Mlig455_039235 {REF} {Length: 1666} {RNA1509_39969} {RNA1310_64316} {RNA815_33985.1}
4.	MligTC455_23110	1801	37.52	Mlig455_015205	Neo: Int S/G2/M Age: - Region-enriched R5: 1.104/0.00009	EIF4G3	1.697	-	0.950	-	-	-	0.747	Mlig455_015205 {REF} {Length: 5800} {Pfam: MIF4G domain [PF02854.21, score=100.5]; MA3 domain [PF02847.19, score=22.8]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [Score=298, Expect=1e-81]; ENSG00000114867, EIF4G1, eukaryotic translation initiation factor 4 gamma 1, [Score=290, Expect=4e-79]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [Score=309, Expect=5e-85]} {Dmel: FBgn0023213, eIF4G1, eukaryotic translation initiation factor 4G1, [Score=155, Expect=2e-37]} {Smed: dd_Smed_v6_10618_0_1, dd_Smed_v6_10618_0_1, [Score=208, Expect=7e-59]} {RNA1509_5307, RNA1509_828} {RNA1310_788.1, RNA1509_5307, RNA1509_828} {RNA1509_5307, RNA1509_828, RNA815_583}
5.	MligTC455_44514	387	8.07	Mlig455_042236	Neo: - Age: -	TPR	0.965	-	-	-	-	-	0.965	Mlig455_042236 {REF} {Length: 7958} {Pfam: TPR/MLP1/MLP2-like protein [PF07926.14, score=37.2]} {Human: ENSG00000047410, TPR, translocated promoter region, nuclear basket protein, [Score=243, Expect=2e-63]} {Mouse: ENSMUSG00000006005, Tpr, translocated promoter region, nuclear basket protein, [Score=233, Expect=9e-61]} {Dmel: FBgn0013756, Mtor, Megator, [Score=99.0, Expect=5e-20]} {Smed: dd_Smed_v6_2899_0_1, dd_Smed_v6_2899_0_1, [RH, Score=164, Expect=3e-40]} {RNA1509_5248} {RNA1310_1101.1} {RNA815_2269}
6.	MligTC455_21186	476	9.91	Mlig455_002574	Neo: - Age: -	FUNDC1	0.959	-	-	-	-	-	0.959	Mlig455_002574 {REF} {Length: 6061} {TRANSSPLICED} {Pfam: FUN14 family [PF04930.17, score=53.5]} {Human: ENSG00000069509, FUNDC1, FUN14 domain containing 1, [Score=62.0, Expect=2e-11]} {Mouse: ENSMUSG00000025040, Fundc1, FUN14 domain containing 1, [Score=60.1, Expect=6e-11]} {RNA1509_23346, RNA1509_46845} {RNA1310_46845, RNA1509_23346, RNA1509_46845} {RNA1509_23346, RNA1509_46845, RNA815_27475}
7.	MligTC455_33041	415	8.65	Mlig455_032967	Neo: - Age: Up-Up-Down	RAB3C	0.959	-	-	-	-	-	0.959	Mlig455_032967 {REF} {Length: 2435} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=208.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.1]; ADP-ribosylation factor family [PF00025.23, score=53.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=23.1]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.4]} {Human: ENSG00000152932, RAB3C, RAB3C, member RAS oncogene family, [RH, Score=339, Expect=2e-119]; ENSG00000105649, RAB3A, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=8e-116]; ENSG00000105514, RAB3D, RAB3D, member RAS oncogene family, [RH, Score=323, Expect=3e-113]} {Mouse: ENSMUSG00000021700, Rab3c, RAB3C, member RAS oncogene family, [RH, Score=337, Expect=1e-118]; ENSMUSG00000019066, Rab3d, RAB3D, member RAS oncogene family, [RH, Score=333, Expect=2e-117]; ENSMUSG00000031840, Rab3a, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=3e-116]; ENSMUSG00000111277, Rab3a, RAB3A, member RAS onco family, [RH, Score=330, Expect=3e-116]; ENSMUSG00000003411, Rab3b, RAB3B, member RAS oncogene family, [RH, Score=326, Expect=1e-114]} {Dmel: FBgn0005586, Rab3, [RH, Score=345, Expect=2e-122]} {Celegans: WBGene00004267, rab-3, Ras-related protein Rab-3, [RH, Score=336, Expect=2e-118]} {Smed: dd_Smed_v6_5920_0_1, dd_Smed_v6_5920_0_1, [RH, Score=343, Expect=7e-122]} {RNA1509_20846, RNA1509_33673} {RNA1310_14402, RNA1509_20846, RNA1509_33673} {RNA1509_20846, RNA1509_33673, RNA815_5665.1}

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