Data search
Results for MligTC455_21234
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21234 | 501 | 10.43 | Mlig455_060803 | Neo: Int S/G2/M Age: - |
Mlig455_060803 {REF} {Length: 3330} {NoTransDecoderORF} {RNA1509_24165} {RNA1310_23162} {RNA815_24470} |
Cumulative graph for MligTC455_21234
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.277 | 3.72 | 0.80923 | 1.00000 | |
| RegionR2 | 0.474 | 3.72 | 0.39935 | 0.79373 | |
| RegionR3 | -0.468 | 3.72 | 0.32023 | 0.85824 | |
| RegionR4 | -0.364 | 3.72 | 0.48444 | 0.81194 | |
| RegionR5 | -0.245 | 3.72 | 0.55638 | 0.91665 | |
| RegionR6 | 0.256 | 3.72 | 0.57998 | 1.00000 | |
| RegionR7 | 0.318 | 3.72 | 0.57424 | 1.00000 | |
| RegionR8 | 0.306 | 3.72 | 0.64987 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.365 | 3.72 | 0.16276 | 0.90413 | |
| RegenerationR2 | 0.327 | 3.72 | 0.49985 | 0.87168 | |
| RegenerationR3 | 1.149 | 3.72 | 0.04108 | 0.35544 | |
| RegenerationR4 | -0.07 | 3.72 | 0.90303 | 1.00000 | |
| RegenerationR5 | 0.389 | 3.72 | 0.44795 | 0.82959 | |
| RegenerationR6 | 0.499 | 3.72 | 0.34806 | 0.69325 | |
| RegenerationBL | 0.101 | 3.72 | 0.86849 | 1.00000 | |
| RegenerationTP | 0.188 | 3.72 | 0.76972 | 1.00000 |
Genes with expression patterns similar to MligTC455_21234
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21234 | 501 | 10.43 | Mlig455_060803 | Neo: Int S/G2/M Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_060803 {REF} {Length: 3330} {NoTransDecoderORF} {RNA1509_24165} {RNA1310_23162} {RNA815_24470} | |
| 2. | MligTC455_31017 | 825 | 17.18 | Mlig455_053510 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 2.081 Region-enriched R4: 1.924/0.00000 Regeneration-downregulated R4: -1.701 Regeneration-depleted R4: -1.701 |
GOLGA3 | 1.676 | - | - | - | 0.951 | - | 0.725 | Mlig455_053510 {REF} {Length: 4752} {TRANSSPLICED} {Human: ENSG00000090615, GOLGA3, golgin A3, [RH, Score=107, Expect=9e-23]} {Mouse: ENSMUSG00000029502, Golga3, golgi autoantigen, golgin subfamily a, 3, [RH, Score=105, Expect=3e-22]} {Smed: dd_Smed_v6_7928_0_1, dd_Smed_v6_7928_0_1, [Score=94.0, Expect=3e-19]} {RNA1509_4848} {RNA1310_1473, RNA1509_4848} {RNA1509_4848, RNA815_781.1} |
| 3. | MligTC455_17256 | 2285 | 47.61 | Mlig455_013837, Mlig455_059934 | Neo: - Age: logFC(26M/2M)=0.367 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_013837 {REF} {Length: 4041} {TRANSSPLICED} {Pfam: MAM domain, meprin/A5/mu [PF00629.25, score=51.2]} {Smed: dd_Smed_v6_1725_0_1, dd_Smed_v6_1725_0_1, [Score=105, Expect=1e-23]} {RNA1509_12221} {RNA1310_15564} {RNA815_6145} Mlig455_059934 {REF} {Length: 3197} {Pfam: Family of unknown function (DUF6479) [PF20087.1, score=22.6]} {Smed: dd_Smed_v6_1725_0_1, dd_Smed_v6_1725_0_1, [Score=78.6, Expect=6e-17]} {RNA1509_12221} {RNA1310_15564} {RNA815_6145} |
|
| 4. | MligTC455_52285 | 1793 | 37.34 | Mlig455_039524 | Neo: - Age: - |
AGO2 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_039524 {REF} {Length: 4281} {Pfam: Piwi domain [PF02171.19, score=364.5]; N-terminal domain of argonaute [PF16486.7, score=104.8]; PAZ domain [PF02170.24, score=82.1]; Mid domain of argonaute [PF16487.7, score=59.1]; Argonaute linker 2 domain [PF16488.7, score=48.1]; Argonaute linker 1 domain [PF08699.12, score=32.7]} {Human: ENSG00000123908, AGO2, argonaute 2, RISC catalytic component, [Score=1099, Expect=0.0]; ENSG00000092847, AGO1, argonaute 1, RISC catalytic component, [Score=1075, Expect=0.0]; ENSG00000126070, AGO3, argonaute 3, RISC catalytic component, [Score=1068, Expect=0.0]; ENSG00000134698, AGO4, argonaute 4, RISC catalytic component, [Score=1050, Expect=0.0]} {Mouse: ENSMUSG00000036698, Ago2, argonaute RISC catalytic subunit 2, [Score=1102, Expect=0.0]; ENSMUSG00000041530, Ago1, argonaute RISC catalytic subunit 1, [Score=1075, Expect=0.0]; ENSMUSG00000028842, Ago3, argonaute RISC catalytic subunit 3, [Score=1066, Expect=0.0]} {Dmel: FBgn0262739, AGO1, Argonaute-1, [Score=1176, Expect=0.0]} {Celegans: WBGene00000105, alg-1, Argonaute-like, [Score=1100, Expect=0.0]} {Smed: dd_Smed_v6_3861_0_1, dd_Smed_v6_3861_0_1, [Score=1278, Expect=0.0]} {RNA1509_3358} {RNA1310_4477.1} {RNA815_1509.1} |
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