Data search
Results for MligTC455_31017
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31017 | 825 | 17.18 | Mlig455_053510 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 2.081 Region-enriched R4: 1.924/0.00000 Regeneration-downregulated R4: -1.701 Regeneration-depleted R4: -1.701 |
GOLGA3 | Mlig455_053510 {REF} {Length: 4752} {TRANSSPLICED} {Human: ENSG00000090615, GOLGA3, golgin A3, [RH, Score=107, Expect=9e-23]} {Mouse: ENSMUSG00000029502, Golga3, golgi autoantigen, golgin subfamily a, 3, [RH, Score=105, Expect=3e-22]} {Smed: dd_Smed_v6_7928_0_1, dd_Smed_v6_7928_0_1, [Score=94.0, Expect=3e-19]} {RNA1509_4848} {RNA1310_1473, RNA1509_4848} {RNA1509_4848, RNA815_781.1} |
Cumulative graph for MligTC455_31017
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.164 | 4.437 | 0.85792 | 1.00000 | |
| RegionR2 | 0.116 | 4.437 | 0.79191 | 1.00000 | |
| RegionR3 | -0.289 | 4.437 | 0.45216 | 0.96342 | |
| RegionR4 | 1.924 | 4.437 | 0.00000 | 0.00000 | Specific for R4: 2.081 |
| RegionR5 | -0.006 | 4.437 | 0.98819 | 1.00000 | |
| RegionR6 | -0.325 | 4.437 | 0.40494 | 0.97493 | |
| RegionR7 | -0.743 | 4.437 | 0.17039 | 0.75951 | |
| RegionR8 | -0.513 | 4.437 | 0.44815 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.929 | 4.437 | 0.21185 | 0.95076 | |
| RegenerationR2 | 0.236 | 4.437 | 0.51067 | 0.87544 | |
| RegenerationR3 | 0.301 | 4.437 | 0.45643 | 0.83586 | |
| RegenerationR4 | -1.701 | 4.437 | 0.00001 | 0.00092 | Specific for R4: -1.701 |
| RegenerationR5 | 0.222 | 4.437 | 0.54214 | 0.88132 | |
| RegenerationR6 | 0.357 | 4.437 | 0.38338 | 0.72389 | |
| RegenerationBL | 0.704 | 4.437 | 0.13974 | 0.44554 | |
| RegenerationTP | 0.265 | 4.437 | 0.64921 | 0.98850 |
Genes with expression patterns similar to MligTC455_31017
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31017 | 825 | 17.18 | Mlig455_053510 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 2.081 Region-enriched R4: 1.924/0.00000 Regeneration-downregulated R4: -1.701 Regeneration-depleted R4: -1.701 |
GOLGA3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_053510 {REF} {Length: 4752} {TRANSSPLICED} {Human: ENSG00000090615, GOLGA3, golgin A3, [RH, Score=107, Expect=9e-23]} {Mouse: ENSMUSG00000029502, Golga3, golgi autoantigen, golgin subfamily a, 3, [RH, Score=105, Expect=3e-22]} {Smed: dd_Smed_v6_7928_0_1, dd_Smed_v6_7928_0_1, [Score=94.0, Expect=3e-19]} {RNA1509_4848} {RNA1310_1473, RNA1509_4848} {RNA1509_4848, RNA815_781.1} |
| 2. | MligTC455_48587 | 563 | 11.73 | Mlig455_049937 | Neo: - Age: Up-Up-Down Region-enriched R4: 2.519/0.00005 |
1.713 | - | - | - | - | 0.750 | 0.963 | Mlig455_049937 {REF} {Length: 1203} {NoTransDecoderORF} {RNA1509_24670, RNA1509_50522} {RNA1310_32596.1, RNA1509_24670, RNA1509_50522} {RNA1509_24670, RNA1509_50522, RNA815_15841.1} | |
| 3. | MligTC455_41160 | 780 | 16.24 | Mlig455_014918 | Neo: - Age: Down-Down-Up |
RBBP6 | 1.689 | - | - | - | 0.731 | - | 0.958 | Mlig455_014918 {REF} {Length: 5116} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=33.3]; U-box domain [PF04564.17, score=26.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=20.7]; Ring finger domain [PF13639.8, score=20.2]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=80.1, Expect=2e-14]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=79.7, Expect=2e-14]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=77.4, Expect=6e-14]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=61.2, Expect=3e-09]} {Smed: dd_Smed_v6_3780_0_2, dd_Smed_v6_3780_0_2, [Score=53.1, Expect=8e-07]} {RNA1509_5537} {RNA1310_2775} {RNA815_5708} |
| 4. | MligTC455_21234 | 501 | 10.43 | Mlig455_060803 | Neo: Int S/G2/M Age: - |
1.676 | - | - | - | 0.951 | - | 0.725 | Mlig455_060803 {REF} {Length: 3330} {NoTransDecoderORF} {RNA1509_24165} {RNA1310_23162} {RNA815_24470} | |
| 5. | MligTC455_46770 | 1406 | 29.28 | Mlig455_056157, Mlig455_058744 | Neo: - Age: logFC(26M/2M)=0.208 |
ENTPD4 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_056157 {REF} {Length: 2483} {TRANSSPLICED} {Pfam: GDA1/CD39 (nucleoside phosphatase) family [PF01150.19, score=362.5]} {Human: ENSG00000197217, ENTPD4, ectonucleoside triphosphate diphosphohydrolase 4, [RH, Score=426, Expect=6e-141]; ENSG00000198018, ENTPD7, ectonucleoside triphosphate diphosphohydrolase 7, [RH, Score=410, Expect=8e-135]} {Mouse: ENSMUSG00000022066, Entpd4b, ectonucleoside triphosphate diphosphohydrolase 4B, [RH, Score=424, Expect=3e-140]; ENSMUSG00000095463, Entpd4, ectonucleoside triphosphate diphosphohydrolase 4, [RH, Score=424, Expect=3e-140]; ENSMUSG00000025192, Entpd7, ectonucleoside triphosphate diphosphohydrolase 7, [RH, Score=419, Expect=2e-138]} {Dmel: FBgn0024947, NTPase, [Score=96.3, Expect=9e-21]} {Celegans: WBGene00003254, mig-23, Nucleoside-diphosphatase mig-23, [RH, Score=321, Expect=2e-101]} {Smed: dd_Smed_v6_4429_0_1, dd_Smed_v6_4429_0_1, [RH, Score=291, Expect=7e-93]} {RNA1509_49185} {RNA1310_6531.1} {RNA815_2259} Mlig455_058744 {REF} {Length: 2432} {TRANSSPLICED} {Pfam: GDA1/CD39 (nucleoside phosphatase) family [PF01150.19, score=372.5]} {Human: ENSG00000197217, ENTPD4, ectonucleoside triphosphate diphosphohydrolase 4, [RH, Score=440, Expect=6e-146]; ENSG00000198018, ENTPD7, ectonucleoside triphosphate diphosphohydrolase 7, [RH, Score=422, Expect=4e-139]} {Mouse: ENSMUSG00000022066, Entpd4b, ectonucleoside triphosphate diphosphohydrolase 4B, [RH, Score=438, Expect=2e-145]; ENSMUSG00000095463, Entpd4, ectonucleoside triphosphate diphosphohydrolase 4, [RH, Score=438, Expect=2e-145]; ENSMUSG00000025192, Entpd7, ectonucleoside triphosphate diphosphohydrolase 7, [RH, Score=430, Expect=2e-142]} {Dmel: FBgn0024947, NTPase, [Score=101, Expect=2e-22]} {Celegans: WBGene00003254, mig-23, Nucleoside-diphosphatase mig-23, [RH, Score=332, Expect=1e-105]} {Smed: dd_Smed_v6_4429_0_1, dd_Smed_v6_4429_0_1, [RH, Score=291, Expect=8e-93]} {RNA1509_58554, RNA1509_59423} {RNA1310_6867.1, RNA1509_58554} {RNA1509_58554, RNA815_2259} |
| 6. | MligTC455_20187 | 463 | 9.65 | Mlig455_056883 | Neo: - Age: - |
RNF145 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_056883 {REF} {Length: 4885} {Pfam: TRC8 N-terminal domain [PF13705.8, score=210.4]; Ring finger domain [PF13639.8, score=32.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=28.7]; RING-H2 zinc finger domain [PF12678.9, score=26.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.0]} {Human: ENSG00000145860, RNF145, ring finger protein 145, [RH, Score=248, Expect=1e-71]} {Mouse: ENSMUSG00000019189, Rnf145, ring finger protein 145, [RH, Score=248, Expect=1e-71]} {Dmel: FBgn0039668, Trc8, TRC8 ring finger protein, [Score=145, Expect=1e-35]} {Celegans: WBGene00022471, Y119C1B.5, [RH, Score=176, Expect=5e-46]} {Smed: dd_Smed_v6_5260_0_1, dd_Smed_v6_5260_0_1, [RH, Score=182, Expect=4e-48]} {RNA1509_19930} {RNA1310_7935} {RNA815_7247} |