Data search


search
Exact
Search

Results for MligTC455_21340

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21340 52 1.08 Mlig455_003346

Neo: -

Age: -

KIF5B Mlig455_003346 {REF} {Length: 3533} {Pfam: Kinesin motor domain [PF00225.25, score=359.3]; Microtubule binding [PF16796.7, score=93.5]; Phage minor structural protein GP20 [PF06810.13, score=20.2]} {Human: ENSG00000170759, KIF5B, kinesin family member 5B, [RH, Score=821, Expect=0.0]; ENSG00000155980, KIF5A, kinesin family member 5A, [RH, Score=781, Expect=0.0]} {Mouse: ENSMUSG00000006740, Kif5b, kinesin family member 5B, [RH, Score=827, Expect=0.0]} {Dmel: FBgn0001308, Khc, Kinesin heavy chain, [RH, Score=837, Expect=0.0]} {Celegans: WBGene00006840, unc-116, Kinesin heavy chain, [RH, Score=465, Expect=1e-150]} {Smed: dd_Smed_v6_3004_0_1, dd_Smed_v6_3004_0_1, [RH, Score=929, Expect=0.0]} {RNA1509_1904} {RNA1310_5064.1} {RNA815_1501}

Cumulative graph for MligTC455_21340

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.184 1.472 0.99998 1.00000
RegionR2 0.903 1.472 0.53821 0.90722
RegionR3 -0.496 1.472 0.86501 1.00000
RegionR4 1.103 1.472 0.43999 0.76879
RegionR5 1.107 1.472 0.31802 0.65879
RegionR6 0.541 1.472 0.58699 1.00000
RegionR7 -2.852 1.472 0.99976 1.00000
RegionR8 2.878 1.472 0.10776 0.61124

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.748 1.472 0.99989 1.00000
RegenerationR2 1.756 1.472 0.12495 0.54699
RegenerationR3 1.567 1.472 0.25338 0.68774
RegenerationR4 0.198 1.472 0.86094 1.00000
RegenerationR5 0.898 1.472 0.34759 0.76227
RegenerationR6 2.631 1.472 0.02259 0.18684
RegenerationBL 2.827 1.472 0.10189 0.37620
RegenerationTP -2.025 1.472 0.99963 1.00000


Genes with expression patterns similar to MligTC455_21340

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21340 52 1.08 Mlig455_003346

Neo: -

Age: -

KIF5B 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_003346 {REF} {Length: 3533} {Pfam: Kinesin motor domain [PF00225.25, score=359.3]; Microtubule binding [PF16796.7, score=93.5]; Phage minor structural protein GP20 [PF06810.13, score=20.2]} {Human: ENSG00000170759, KIF5B, kinesin family member 5B, [RH, Score=821, Expect=0.0]; ENSG00000155980, KIF5A, kinesin family member 5A, [RH, Score=781, Expect=0.0]} {Mouse: ENSMUSG00000006740, Kif5b, kinesin family member 5B, [RH, Score=827, Expect=0.0]} {Dmel: FBgn0001308, Khc, Kinesin heavy chain, [RH, Score=837, Expect=0.0]} {Celegans: WBGene00006840, unc-116, Kinesin heavy chain, [RH, Score=465, Expect=1e-150]} {Smed: dd_Smed_v6_3004_0_1, dd_Smed_v6_3004_0_1, [RH, Score=929, Expect=0.0]} {RNA1509_1904} {RNA1310_5064.1} {RNA815_1501}
2. MligTC455_20826 17 0.36 Mlig455_002403

Neo: Germline

Age: -

0.967 - - - - - 0.967 Mlig455_002403 {REF} {Length: 4513} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=125.3]; Glycosyl transferase family 2 [PF13704.8, score=28.2]} {Dmel: FBgn0032506, CG9395, [Score=114, Expect=1e-26]} {Celegans: WBGene00018809, F54D10.8, [RH, Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=223, Expect=6e-68]} {RNA1509_29268} {RNA1310_12603} {RNA815_25457.1}
3. MligTC455_26655 115 2.4 Mlig455_038895, Mlig455_063862

Neo: -

Age: -

TRMT2A 0.961 - - - - - 0.961

Mlig455_038895 {REF} {Length: 2987} {TRANSSPLICED} {Pfam: tRNA (Uracil-5-)-methyltransferase [PF05958.13, score=58.0]; Methyltransferase domain [PF13847.8, score=39.6]; Methyltransferase domain [PF13649.8, score=36.5]; Methyltransferase domain [PF08241.14, score=26.7]; Methyltransferase small domain [PF05175.16, score=24.8]; RNA cap guanine-N2 methyltransferase [PF09445.12, score=24.7]; ubiE/COQ5 methyltransferase family [PF01209.20, score=20.7]; Conserved hypothetical protein 95 [PF03602.17, score=20.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.2]; Putative methyltransferase [PF02390.19, score=18.7]} {Human: ENSG00000099899, TRMT2A, tRNA methyltransferase 2 homolog A, [RH, Score=343, Expect=8e-110]} {Mouse: ENSMUSG00000022721, Trmt2a, TRM2 tRNA methyltransferase 2A, [RH, Score=340, Expect=1e-108]; ENSMUSG00000098930, Trmt2a, TRM2 tRNA methyltransferase 2A, [RH, Score=340, Expect=1e-108]} {Dmel: FBgn0036838, CG3808, [RH, Score=323, Expect=2e-102]} {Celegans: WBGene00019241, H24K24.4, [RH, Score=157, Expect=1e-43]} {Smed: dd_Smed_v6_11602_0_1, dd_Smed_v6_11602_0_1, [RH, Score=323, Expect=7e-103]} {RNA1509_24549} {RNA1310_12513, RNA1509_24549} {RNA1509_24549, RNA815_4992}

Mlig455_063862 {REF} {Length: 2460} {TRANSSPLICED} {Pfam: tRNA (Uracil-5-)-methyltransferase [PF05958.13, score=58.0]; Methyltransferase domain [PF13847.8, score=39.6]; Methyltransferase domain [PF13649.8, score=36.4]; Methyltransferase domain [PF08241.14, score=26.6]; RNA cap guanine-N2 methyltransferase [PF09445.12, score=24.7]; Methyltransferase small domain [PF05175.16, score=24.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.1]; ubiE/COQ5 methyltransferase family [PF01209.20, score=20.6]; Conserved hypothetical protein 95 [PF03602.17, score=20.5]; Putative methyltransferase [PF02390.19, score=18.7]} {Human: ENSG00000099899, TRMT2A, tRNA methyltransferase 2 homolog A, [RH, Score=340, Expect=2e-108]} {Mouse: ENSMUSG00000022721, Trmt2a, TRM2 tRNA methyltransferase 2A, [RH, Score=336, Expect=2e-107]; ENSMUSG00000098930, Trmt2a, TRM2 tRNA methyltransferase 2A, [RH, Score=336, Expect=2e-107]} {Dmel: FBgn0036838, CG3808, [RH, Score=327, Expect=7e-104]} {Celegans: WBGene00019241, H24K24.4, [RH, Score=157, Expect=1e-43]} {Smed: dd_Smed_v6_11602_0_1, dd_Smed_v6_11602_0_1, [RH, Score=323, Expect=8e-103]} {RNA1509_36910} {RNA1310_12513, RNA1509_36910} {RNA1509_36910, RNA815_4992}
4. MligTC455_21145 21 0.44 Mlig455_027825

Neo: -

Age: -

0.958 - - - 0.958 - - Mlig455_027825 {REF} {Length: 337} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_72214} {RNA815_47584}
5. MligTC455_42829 519 10.81 Mlig455_030432, Mlig455_030487

Neo: Irradiation

Age: Up-Down-Down

LMAN2 0.957 - - - 0.957 - -

Mlig455_030432 {REF} {Length: 2270} {Pfam: Legume-like lectin family [PF03388.15, score=194.1]; Bacterial lectin [PF18483.3, score=29.6]} {Human: ENSG00000169223, LMAN2, lectin, mannose binding 2, [Score=204, Expect=8e-62]} {Mouse: ENSMUSG00000021484, Lman2, lectin, mannose-binding 2, [Score=202, Expect=4e-61]} {Dmel: FBgn0039160, CG5510, [Score=195, Expect=5e-59]} {Celegans: WBGene00002071, ile-2, Intracellular LEctin, [Score=197, Expect=7e-60]} {Smed: dd_Smed_v6_2066_0_1, dd_Smed_v6_2066_0_1, [Score=222, Expect=7e-70]} {RNA1509_28503, RNA1509_37977} {RNA1310_16999, RNA1509_37977} {RNA1509_37977, RNA815_6545}

Mlig455_030487 {REF} {Length: 2178} {Pfam: Legume-like lectin family [PF03388.15, score=168.0]; Bacterial lectin [PF18483.3, score=27.5]} {Human: ENSG00000169223, LMAN2, lectin, mannose binding 2, [Score=167, Expect=9e-48]} {Mouse: ENSMUSG00000021484, Lman2, lectin, mannose-binding 2, [Score=164, Expect=5e-47]} {Dmel: FBgn0039160, CG5510, [Score=158, Expect=5e-45]} {Celegans: WBGene00002071, ile-2, Intracellular LEctin, [Score=164, Expect=3e-47]} {Smed: dd_Smed_v6_2066_0_1, dd_Smed_v6_2066_0_1, [Score=183, Expect=5e-55]} {RNA1509_28503, RNA1509_44543} {RNA1310_16999, RNA1509_44543} {RNA1509_44543, RNA815_6545}
6. MligTC455_43858 19 0.39 Mlig455_018073

Neo: -

Age: -

0.957 - - - 0.957 - - Mlig455_018073 {REF} {Length: 2715} {RNA1310_96909}
7. MligTC455_47530 800 16.67 Mlig455_006029

Neo: -

Age: -

Region-enriched R6: 4.749/0.00000
Region-enriched R7: 3.602/0.00045

WNT9B 0.955 - - - 0.955 - - Mlig455_006029 {REF} {Length: 2805} {Pfam: wnt family [PF00110.21, score=133.2]} {Human: ENSG00000158955, WNT9B, Wnt family member 9B, [Score=86.7, Expect=6e-18]; ENSG00000276799, WNT9B, Wnt family member 9B, [Score=86.7, Expect=6e-18]} {Mouse: ENSMUSG00000015957, Wnt11, wingless-type MMTV integration site family, member 11, [Score=86.7, Expect=4e-18]; ENSMUSG00000029671, Wnt16, wingless-type MMTV integration site family, member 16, [Score=84.7, Expect=2e-17]} {Celegans: WBGene00000857, cwn-1, [Score=87.8, Expect=1e-18]} {Smed: dd_Smed_v6_14391_0_1, dd_Smed_v6_14391_0_1, [Score=134, Expect=9e-35]} {RNA1509_18165} {RNA1310_9195.1, RNA1509_18165} {RNA1509_18165, RNA815_10665}
8. MligTC455_12536 196 4.09 Mlig455_044362

Neo: -

Age: -

0.952 - - - 0.952 - - Mlig455_044362 {REF} {Length: 1085} {RNA1310_39047} {RNA815_18168}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA