Data search


search
Exact
Search

Results for MligTC455_20826

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20826 17 0.36 Mlig455_002403

Neo: Germline

Age: -

Mlig455_002403 {REF} {Length: 4513} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=125.3]; Glycosyl transferase family 2 [PF13704.8, score=28.2]} {Dmel: FBgn0032506, CG9395, [Score=114, Expect=1e-26]} {Celegans: WBGene00018809, F54D10.8, [RH, Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=223, Expect=6e-68]} {RNA1509_29268} {RNA1310_12603} {RNA815_25457.1}

Cumulative graph for MligTC455_20826

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.318 0.84 0.98064 1.00000
RegionR2 -2.534 0.84 0.99951 1.00000
RegionR3 -3.187 0.84 0.99954 1.00000
RegionR4 3.098 0.84 0.06161 0.22221
RegionR5 1.181 0.84 0.33551 0.68145
RegionR6 -3.342 0.84 0.99954 1.00000
RegionR7 0.803 0.84 0.72112 1.00000
RegionR8 1.664 0.84 0.56180 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.167 0.84 0.99986 1.00000
RegenerationR2 -1.851 0.84 0.24171 0.68963
RegenerationR3 1.032 0.84 0.56099 0.88880
RegenerationR4 -1.963 0.84 0.12180 0.53150
RegenerationR5 -0.975 0.84 0.27184 0.70322
RegenerationR6 -1.175 0.84 0.75582 0.95483
RegenerationBL -3.363 0.84 0.39690 0.76575
RegenerationTP -3.29 0.84 0.14864 0.57274


Genes with expression patterns similar to MligTC455_20826

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20826 17 0.36 Mlig455_002403

Neo: Germline

Age: -

2 - - - - 1.000 1.000 Mlig455_002403 {REF} {Length: 4513} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=125.3]; Glycosyl transferase family 2 [PF13704.8, score=28.2]} {Dmel: FBgn0032506, CG9395, [Score=114, Expect=1e-26]} {Celegans: WBGene00018809, F54D10.8, [RH, Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=223, Expect=6e-68]} {RNA1509_29268} {RNA1310_12603} {RNA815_25457.1}
2. MligTC455_09452 19 0.4 Mlig455_040643

Neo: -

Age: Down-Up-Down

ANKRD28 0.978 - - - - 0.978 - Mlig455_040643 {REF} {Length: 4360} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=58.1]; Ankyrin repeat [PF13606.8, score=42.0]; Ankyrin repeat [PF00023.32, score=35.6]; Ankyrin repeats (many copies) [PF13637.8, score=30.8]; Ankyrin repeats (many copies) [PF13857.8, score=29.0]} {Human: ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=58.9, Expect=8e-09]} {Mouse: ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=58.9, Expect=5e-09]; ENSMUSG00000078487, Ankrd65, ankyrin repeat domain 65, [Score=58.5, Expect=5e-09]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=63.5, Expect=1e-10]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=53.5, Expect=1e-07]} {RNA1509_42830} {RNA1310_48342, RNA1509_42830} {RNA1509_42830, RNA815_30933}
3. MligTC455_39269 29 0.6 Mlig455_066512

Neo: -

Age: -

KCNB2 0.975 - - - - 0.975 - Mlig455_066512 {REF} {Length: 6059} {Pfam: Ion transport protein [PF00520.33, score=157.5]; BTB/POZ domain [PF02214.24, score=82.8]; IRSp53/MIM homology domain [PF08397.13, score=77.0]; Ion channel [PF07885.18, score=44.7]} {Human: ENSG00000182674, KCNB2, potassium voltage-gated channel subfamily B member 2, [Score=514, Expect=2e-160]; ENSG00000158445, KCNB1, potassium voltage-gated channel subfamily B member 1, [Score=508, Expect=4e-159]} {Mouse: ENSMUSG00000092083, Kcnb2, potassium voltage gated channel, Shab-related subfamily, member 2, [Score=513, Expect=1e-160]; ENSMUSG00000050556, Kcnb1, potassium voltage gated channel, Shab-related subfamily, member 1, [Score=506, Expect=2e-158]} {Dmel: FBgn0262593, Shab, Shaker cognate b, [Score=533, Expect=1e-169]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=287, Expect=4e-84]} {Smed: dd_Smed_v6_13710_0_1, dd_Smed_v6_13710_0_1, [Score=529, Expect=2e-167]} {RNA1509_52791} {RNA1310_22952} {RNA815_16287.1}
4. MligTC455_21259 16 0.33 Mlig455_014916

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.758

MFSD2A 0.968 - - - - 0.968 - Mlig455_014916 {REF} {Length: 2596} {Pfam: MFS/sugar transport protein [PF13347.8, score=240.3]} {Human: ENSG00000168389, MFSD2A, major facilitator superfamily domain containing 2A, [Score=224, Expect=2e-66]} {Mouse: ENSMUSG00000028655, Mfsd2a, major facilitator superfamily domain containing 2A, [Score=217, Expect=1e-63]} {Smed: dd_Smed_v6_11210_0_1, dd_Smed_v6_11210_0_1, [Score=228, Expect=4e-68]} {RNA1310_11647} {RNA815_7111}
5. MligTC455_21340 52 1.08 Mlig455_003346

Neo: -

Age: -

KIF5B 0.967 - - - - - 0.967 Mlig455_003346 {REF} {Length: 3533} {Pfam: Kinesin motor domain [PF00225.25, score=359.3]; Microtubule binding [PF16796.7, score=93.5]; Phage minor structural protein GP20 [PF06810.13, score=20.2]} {Human: ENSG00000170759, KIF5B, kinesin family member 5B, [RH, Score=821, Expect=0.0]; ENSG00000155980, KIF5A, kinesin family member 5A, [RH, Score=781, Expect=0.0]} {Mouse: ENSMUSG00000006740, Kif5b, kinesin family member 5B, [RH, Score=827, Expect=0.0]} {Dmel: FBgn0001308, Khc, Kinesin heavy chain, [RH, Score=837, Expect=0.0]} {Celegans: WBGene00006840, unc-116, Kinesin heavy chain, [RH, Score=465, Expect=1e-150]} {Smed: dd_Smed_v6_3004_0_1, dd_Smed_v6_3004_0_1, [RH, Score=929, Expect=0.0]} {RNA1509_1904} {RNA1310_5064.1} {RNA815_1501}
6. MligTC455_05857 9 0.19 Mlig455_068937

Neo: -

Age: -

0.959 - - - - - 0.959 Mlig455_068937 {REF} {Length: 1762} {RNA1310_125011} {RNA815_10062.1}
7. MligTC455_23054 30 0.63 Mlig455_037125

Neo: -

Age: logFC(26M/2M)=0.361

Region-enriched R4: 4.587/0.03512

SMYD2 0.958 - - - - 0.958 - Mlig455_037125 {REF} {Length: 3233} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=63.8]; MYND finger [PF01753.20, score=20.3]} {Human: ENSG00000143499, SMYD2, SET and MYND domain containing 2, [Score=99.0, Expect=2e-21]} {Mouse: ENSMUSG00000018809, Smyd4, SET and MYND domain containing 4, [Score=107, Expect=8e-24]} {Dmel: FBgn0027495, Smyd4-4, SET and MYND domain containing, class 4, member 4, [RH, Score=145, Expect=1e-36]} {Smed: dd_Smed_v6_12412_0_2, dd_Smed_v6_12412_0_2, [RH, Score=209, Expect=4e-59]} {RNA1509_16110} {RNA1310_7690, RNA1509_16110} {RNA1509_16110, RNA815_25789}
8. MligTC455_26655 115 2.4 Mlig455_038895, Mlig455_063862

Neo: -

Age: -

TRMT2A 0.958 - - - - - 0.958

Mlig455_038895 {REF} {Length: 2987} {TRANSSPLICED} {Pfam: tRNA (Uracil-5-)-methyltransferase [PF05958.13, score=58.0]; Methyltransferase domain [PF13847.8, score=39.6]; Methyltransferase domain [PF13649.8, score=36.5]; Methyltransferase domain [PF08241.14, score=26.7]; Methyltransferase small domain [PF05175.16, score=24.8]; RNA cap guanine-N2 methyltransferase [PF09445.12, score=24.7]; ubiE/COQ5 methyltransferase family [PF01209.20, score=20.7]; Conserved hypothetical protein 95 [PF03602.17, score=20.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.2]; Putative methyltransferase [PF02390.19, score=18.7]} {Human: ENSG00000099899, TRMT2A, tRNA methyltransferase 2 homolog A, [RH, Score=343, Expect=8e-110]} {Mouse: ENSMUSG00000022721, Trmt2a, TRM2 tRNA methyltransferase 2A, [RH, Score=340, Expect=1e-108]; ENSMUSG00000098930, Trmt2a, TRM2 tRNA methyltransferase 2A, [RH, Score=340, Expect=1e-108]} {Dmel: FBgn0036838, CG3808, [RH, Score=323, Expect=2e-102]} {Celegans: WBGene00019241, H24K24.4, [RH, Score=157, Expect=1e-43]} {Smed: dd_Smed_v6_11602_0_1, dd_Smed_v6_11602_0_1, [RH, Score=323, Expect=7e-103]} {RNA1509_24549} {RNA1310_12513, RNA1509_24549} {RNA1509_24549, RNA815_4992}

Mlig455_063862 {REF} {Length: 2460} {TRANSSPLICED} {Pfam: tRNA (Uracil-5-)-methyltransferase [PF05958.13, score=58.0]; Methyltransferase domain [PF13847.8, score=39.6]; Methyltransferase domain [PF13649.8, score=36.4]; Methyltransferase domain [PF08241.14, score=26.6]; RNA cap guanine-N2 methyltransferase [PF09445.12, score=24.7]; Methyltransferase small domain [PF05175.16, score=24.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.1]; ubiE/COQ5 methyltransferase family [PF01209.20, score=20.6]; Conserved hypothetical protein 95 [PF03602.17, score=20.5]; Putative methyltransferase [PF02390.19, score=18.7]} {Human: ENSG00000099899, TRMT2A, tRNA methyltransferase 2 homolog A, [RH, Score=340, Expect=2e-108]} {Mouse: ENSMUSG00000022721, Trmt2a, TRM2 tRNA methyltransferase 2A, [RH, Score=336, Expect=2e-107]; ENSMUSG00000098930, Trmt2a, TRM2 tRNA methyltransferase 2A, [RH, Score=336, Expect=2e-107]} {Dmel: FBgn0036838, CG3808, [RH, Score=327, Expect=7e-104]} {Celegans: WBGene00019241, H24K24.4, [RH, Score=157, Expect=1e-43]} {Smed: dd_Smed_v6_11602_0_1, dd_Smed_v6_11602_0_1, [RH, Score=323, Expect=8e-103]} {RNA1509_36910} {RNA1310_12513, RNA1509_36910} {RNA1509_36910, RNA815_4992}
9. MligTC455_15702 47 0.97 Mlig455_019200

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_019200 {REF} {Length: 4665} {RNA1509_57405} {RNA1310_50410}
10. MligTC455_00551 25 0.52 Mlig455_023204

Neo: -

Age: -

0.952 - - - - - 0.952 Mlig455_023204 {REF} {Length: 134} {NoTransDecoderORF} {RNA1509_284} {RNA1310_119140} {RNA815_6153}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA