TomoSeq data search

Data search

Results for MligTC455_21430

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21430	3293	68.61	Mlig455_035694, Mlig455_035788	Neo: - Age: -	ACSS3	Mlig455_035694 {REF} {Length: 3161} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=251.3]; Acetyl-coenzyme A synthetase N-terminus [PF16177.7, score=76.4]; AMP-binding enzyme C-terminal domain [PF13193.8, score=57.4]} {Human: ENSG00000111058, ACSS3, acyl-CoA synthetase short chain family member 3, [RH, Score=716, Expect=0.0]} {Mouse: ENSMUSG00000035948, Acss3, acyl-CoA synthetase short-chain family member 3, [RH, Score=722, Expect=0.0]} {Dmel: FBgn0039184, CG6432, [RH, Score=647, Expect=0.0]} {Celegans: WBGene00007969, acs-19, Acetyl-coenzyme A synthetase, [Score=304, Expect=4e-94]} {Smed: dd_Smed_v6_2832_0_1, dd_Smed_v6_2832_0_1, [RH, Score=758, Expect=0.0]} {RNA1509_2449} {RNA1310_4900.1, RNA1509_2449} {RNA1509_2449, RNA815_4055} Mlig455_035788 {REF} {Length: 3175} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=251.3]; Acetyl-coenzyme A synthetase N-terminus [PF16177.7, score=76.4]; AMP-binding enzyme C-terminal domain [PF13193.8, score=57.3]} {Human: ENSG00000111058, ACSS3, acyl-CoA synthetase short chain family member 3, [RH, Score=715, Expect=0.0]} {Mouse: ENSMUSG00000035948, Acss3, acyl-CoA synthetase short-chain family member 3, [RH, Score=721, Expect=0.0]} {Dmel: FBgn0039184, CG6432, [RH, Score=646, Expect=0.0]} {Celegans: WBGene00007969, acs-19, Acetyl-coenzyme A synthetase, [Score=305, Expect=2e-94]} {Smed: dd_Smed_v6_2832_0_1, dd_Smed_v6_2832_0_1, [RH, Score=758, Expect=0.0]} {RNA1509_2449, RNA1509_34585, RNA1509_56232} {RNA1310_4900.1, RNA1509_34585, RNA1509_56232} {RNA1509_34585, RNA1509_56232, RNA815_4055}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21430

3293

68.61

Mlig455_035694, Mlig455_035788

Neo: -

Age: -

ACSS3

Mlig455_035694 {REF} {Length: 3161} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=251.3]; Acetyl-coenzyme A synthetase N-terminus [PF16177.7, score=76.4]; AMP-binding enzyme C-terminal domain [PF13193.8, score=57.4]} {Human: ENSG00000111058, ACSS3, acyl-CoA synthetase short chain family member 3, [RH, Score=716, Expect=0.0]} {Mouse: ENSMUSG00000035948, Acss3, acyl-CoA synthetase short-chain family member 3, [RH, Score=722, Expect=0.0]} {Dmel: FBgn0039184, CG6432, [RH, Score=647, Expect=0.0]} {Celegans: WBGene00007969, acs-19, Acetyl-coenzyme A synthetase, [Score=304, Expect=4e-94]} {Smed: dd_Smed_v6_2832_0_1, dd_Smed_v6_2832_0_1, [RH, Score=758, Expect=0.0]} {RNA1509_2449} {RNA1310_4900.1, RNA1509_2449} {RNA1509_2449, RNA815_4055}

Mlig455_035788 {REF} {Length: 3175} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=251.3]; Acetyl-coenzyme A synthetase N-terminus [PF16177.7, score=76.4]; AMP-binding enzyme C-terminal domain [PF13193.8, score=57.3]} {Human: ENSG00000111058, ACSS3, acyl-CoA synthetase short chain family member 3, [RH, Score=715, Expect=0.0]} {Mouse: ENSMUSG00000035948, Acss3, acyl-CoA synthetase short-chain family member 3, [RH, Score=721, Expect=0.0]} {Dmel: FBgn0039184, CG6432, [RH, Score=646, Expect=0.0]} {Celegans: WBGene00007969, acs-19, Acetyl-coenzyme A synthetase, [Score=305, Expect=2e-94]} {Smed: dd_Smed_v6_2832_0_1, dd_Smed_v6_2832_0_1, [RH, Score=758, Expect=0.0]} {RNA1509_2449, RNA1509_34585, RNA1509_56232} {RNA1310_4900.1, RNA1509_34585, RNA1509_56232} {RNA1509_34585, RNA1509_56232, RNA815_4055}

Cumulative graph for MligTC455_21430

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.087	6.231	0.88624	1.00000
RegionR2	0.34	6.231	0.24884	0.62660
RegionR3	0.387	6.231	0.10867	0.57409
RegionR4	0.695	6.231	0.02174	0.10830
RegionR5	-0.347	6.231	0.15961	0.42024
RegionR6	-0.213	6.231	0.40864	0.97817
RegionR7	-0.551	6.231	0.07775	0.53753
RegionR8	-0.225	6.231	0.54199	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.659	6.231	0.09324	0.80177
RegenerationR2	-0.185	6.231	0.51056	0.87538
RegenerationR3	-0.061	6.231	0.83707	0.99292
RegenerationR4	-0.289	6.231	0.35512	0.78446
RegenerationR5	0.627	6.231	0.03486	0.31089
RegenerationR6	0.076	6.231	0.80399	0.97935
RegenerationBL	0.214	6.231	0.48831	0.85319
RegenerationTP	-0.785	6.231	0.03472	0.31098

Genes with expression patterns similar to MligTC455_21430

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21430	3293	68.61	Mlig455_035694, Mlig455_035788	Neo: - Age: -	ACSS3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_035694 {REF} {Length: 3161} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=251.3]; Acetyl-coenzyme A synthetase N-terminus [PF16177.7, score=76.4]; AMP-binding enzyme C-terminal domain [PF13193.8, score=57.4]} {Human: ENSG00000111058, ACSS3, acyl-CoA synthetase short chain family member 3, [RH, Score=716, Expect=0.0]} {Mouse: ENSMUSG00000035948, Acss3, acyl-CoA synthetase short-chain family member 3, [RH, Score=722, Expect=0.0]} {Dmel: FBgn0039184, CG6432, [RH, Score=647, Expect=0.0]} {Celegans: WBGene00007969, acs-19, Acetyl-coenzyme A synthetase, [Score=304, Expect=4e-94]} {Smed: dd_Smed_v6_2832_0_1, dd_Smed_v6_2832_0_1, [RH, Score=758, Expect=0.0]} {RNA1509_2449} {RNA1310_4900.1, RNA1509_2449} {RNA1509_2449, RNA815_4055} Mlig455_035788 {REF} {Length: 3175} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=251.3]; Acetyl-coenzyme A synthetase N-terminus [PF16177.7, score=76.4]; AMP-binding enzyme C-terminal domain [PF13193.8, score=57.3]} {Human: ENSG00000111058, ACSS3, acyl-CoA synthetase short chain family member 3, [RH, Score=715, Expect=0.0]} {Mouse: ENSMUSG00000035948, Acss3, acyl-CoA synthetase short-chain family member 3, [RH, Score=721, Expect=0.0]} {Dmel: FBgn0039184, CG6432, [RH, Score=646, Expect=0.0]} {Celegans: WBGene00007969, acs-19, Acetyl-coenzyme A synthetase, [Score=305, Expect=2e-94]} {Smed: dd_Smed_v6_2832_0_1, dd_Smed_v6_2832_0_1, [RH, Score=758, Expect=0.0]} {RNA1509_2449, RNA1509_34585, RNA1509_56232} {RNA1310_4900.1, RNA1509_34585, RNA1509_56232} {RNA1509_34585, RNA1509_56232, RNA815_4055}
2.	MligTC455_45659	1015	21.14	Mlig455_064934	Neo: - Age: -	SPATA6	1.751	-	0.800	0.951	-	-	-	Mlig455_064934 {REF} {Length: 2158} {TRANSSPLICED} {Pfam: Spermatogenesis-assoc protein 6 [PF14909.8, score=79.4]} {Human: ENSG00000132122, SPATA6, spermatogenesis associated 6, [Score=75.1, Expect=3e-14]} {Mouse: ENSMUSG00000034401, Spata6, spermatogenesis associated 6, [Score=73.9, Expect=7e-14]} {Smed: dd_Smed_v6_10543_0_1, dd_Smed_v6_10543_0_1, [Score=153, Expect=4e-43]} {RNA1509_21442, RNA1509_8489} {RNA1310_11404, RNA1509_21442} {RNA1509_21442, RNA815_25609.1}
3.	MligTC455_45658	1036	21.58	Mlig455_018899	Neo: - Age: Down-Down-Up	SPATA6	1.744	-	0.792	0.952	-	-	-	Mlig455_018899 {REF} {Length: 2167} {TRANSSPLICED} {Pfam: Spermatogenesis-assoc protein 6 [PF14909.8, score=79.4]} {Human: ENSG00000132122, SPATA6, spermatogenesis associated 6, [Score=75.1, Expect=3e-14]} {Mouse: ENSMUSG00000034401, Spata6, spermatogenesis associated 6, [Score=73.9, Expect=7e-14]} {Smed: dd_Smed_v6_10543_0_1, dd_Smed_v6_10543_0_1, [Score=153, Expect=4e-43]} {RNA1509_8489} {RNA1310_11404, RNA1509_8489} {RNA1509_8489, RNA815_25609.1}
4.	MligTC455_33667	5958	124.13	Mlig455_007432, Mlig455_009113, Mlig455_018420, Mlig455_018422, Mlig455_019321, Mlig455_019779, Mlig455_022265, Mlig455_030138, Mlig455_039042, Mlig455_044740, Mlig455_046763, Mlig455_048838, Mlig455_070035	Neo: - Age: logFC(26M/2M)=-0.692		1.691	-	-	0.952	-	-	0.739	Mlig455_007432 {REF} {Length: 4106} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38197} {RNA1310_15214.1, RNA1509_38197} {RNA1509_38197, RNA815_16073} Mlig455_009113 {REF} {Length: 798} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073} Mlig455_018420 {REF} {Length: 1199} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_23746} {RNA815_16073} Mlig455_018422 {REF} {Length: 782} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073} Mlig455_019321 {REF} {Length: 772} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073} Mlig455_019779 {REF} {Length: 770} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073} Mlig455_022265 {REF} {Length: 730} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073} Mlig455_030138 {REF} {Length: 769} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073} Mlig455_039042 {REF} {Length: 772} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073} Mlig455_044740 {REF} {Length: 744} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073} Mlig455_046763 {REF} {Length: 752} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073} Mlig455_048838 {REF} {Length: 772} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073} Mlig455_070035 {REF} {Length: 730} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_23746} {RNA815_16073}
5.	MligTC455_26432	1498	31.21	Mlig455_070327	Neo: - Age: Down-Up-Up		0.962	-	-	-	-	0.962	-	Mlig455_070327 {REF} {Length: 1200} {NoTransDecoderORF} {RNA1509_11441, RNA1509_19097, RNA1509_46968} {RNA1310_49149.2, RNA1509_11441, RNA1509_19097, RNA1509_46968} {RNA1509_11441, RNA1509_19097, RNA1509_46968, RNA815_25016}
6.	MligTC455_39523	2843	59.24	Mlig455_043149	Neo: - Age: logFC(26M/2M)=0.206	CAPN3	0.954	-	-	-	-	0.954	-	Mlig455_043149 {REF} {Length: 3498} {TRANSSPLICED} {Pfam: Calpain family cysteine protease [PF00648.23, score=421.5]; Calpain large subunit, domain III [PF01067.24, score=157.4]; EF hand [PF00036.34, score=41.0]; EF-hand domain [PF13405.8, score=32.1]; EF-hand domain pair [PF13833.8, score=23.4]; EF-hand domain pair [PF13499.8, score=22.3]; EF hand [PF13202.8, score=19.0]} {Human: ENSG00000092529, CAPN3, calpain 3, [RH, Score=654, Expect=0.0]; ENSG00000135773, CAPN9, calpain 9, [RH, Score=626, Expect=0.0]} {Mouse: ENSMUSG00000079110, Capn3, calpain 3, [RH, Score=650, Expect=0.0]; ENSMUSG00000031981, Capn9, calpain 9, [RH, Score=625, Expect=0.0]} {Dmel: FBgn0025866, CalpB, Calpain-B, [RH, Score=723, Expect=0.0]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [RH, Score=505, Expect=4e-169]} {Smed: dd_Smed_v6_1752_0_3, dd_Smed_v6_1752_0_3, [RH, Score=974, Expect=0.0]} {RNA1509_1861, RNA1509_31038} {RNA1310_10875, RNA1509_31038} {RNA1509_31038, RNA815_1008.1}