Data search
Results for MligTC455_21441
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21441 | 560 | 11.67 | Mlig455_014019 | Neo: - Age: Down-Down-Up |
HERC4 | Mlig455_014019 {REF} {Length: 3949} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=252.3]; Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=152.6]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=105.7]} {Human: ENSG00000148634, HERC4, HECT and RLD domain containing E3 ubiquitin protein ligase 4, [Score=525, Expect=1e-168]; ENSG00000138641, HERC3, HECT and RLD domain containing E3 ubiquitin protein ligase 3, [Score=508, Expect=4e-162]} {Mouse: ENSMUSG00000020064, Herc4, hect domain and RLD 4, [Score=547, Expect=3e-177]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [Score=543, Expect=6e-176]} {Celegans: WBGene00021685, herc-1, HECT and RCC domain E3 ubiquitin ligase, [Score=378, Expect=3e-114]} {Smed: dd_Smed_v6_8701_0_1, dd_Smed_v6_8701_0_1, [Score=474, Expect=8e-150]} {RNA1509_22692, RNA1509_29257} {RNA1310_3324, RNA1509_22692, RNA1509_29257} {RNA1509_22692, RNA1509_29257, RNA815_2324.1} |
Cumulative graph for MligTC455_21441
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.559 | 3.924 | 0.60716 | 1.00000 | |
| RegionR2 | 0.809 | 3.924 | 0.11819 | 0.42587 | |
| RegionR3 | 0.008 | 3.924 | 0.98318 | 1.00000 | |
| RegionR4 | -0.915 | 3.924 | 0.08407 | 0.27401 | |
| RegionR5 | 0.793 | 3.924 | 0.02729 | 0.12094 | |
| RegionR6 | 0.034 | 3.924 | 0.93662 | 1.00000 | |
| RegionR7 | -0.505 | 3.924 | 0.41462 | 1.00000 | |
| RegionR8 | -0.782 | 3.924 | 0.34937 | 0.98312 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.459 | 3.924 | 0.05789 | 0.72268 | |
| RegenerationR2 | -0.013 | 3.924 | 0.97432 | 1.00000 | |
| RegenerationR3 | 0.238 | 3.924 | 0.62218 | 0.91745 | |
| RegenerationR4 | 0.654 | 3.924 | 0.20700 | 0.65394 | |
| RegenerationR5 | -0.056 | 3.924 | 0.89304 | 1.00000 | |
| RegenerationR6 | 0.281 | 3.924 | 0.56369 | 0.84795 | |
| RegenerationBL | -0.054 | 3.924 | 0.93520 | 1.00000 | |
| RegenerationTP | 0.537 | 3.924 | 0.44431 | 0.86353 |
Genes with expression patterns similar to MligTC455_21441
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21441 | 560 | 11.67 | Mlig455_014019 | Neo: - Age: Down-Down-Up |
HERC4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_014019 {REF} {Length: 3949} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=252.3]; Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=152.6]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=105.7]} {Human: ENSG00000148634, HERC4, HECT and RLD domain containing E3 ubiquitin protein ligase 4, [Score=525, Expect=1e-168]; ENSG00000138641, HERC3, HECT and RLD domain containing E3 ubiquitin protein ligase 3, [Score=508, Expect=4e-162]} {Mouse: ENSMUSG00000020064, Herc4, hect domain and RLD 4, [Score=547, Expect=3e-177]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [Score=543, Expect=6e-176]} {Celegans: WBGene00021685, herc-1, HECT and RCC domain E3 ubiquitin ligase, [Score=378, Expect=3e-114]} {Smed: dd_Smed_v6_8701_0_1, dd_Smed_v6_8701_0_1, [Score=474, Expect=8e-150]} {RNA1509_22692, RNA1509_29257} {RNA1310_3324, RNA1509_22692, RNA1509_29257} {RNA1509_22692, RNA1509_29257, RNA815_2324.1} |
| 2. | MligTC455_46334 | 651 | 13.55 | Mlig455_048015 | Neo: - Age: Down-Up-Up |
HDAC4 | 2.499 | 0.732 | - | 0.809 | - | 0.958 | - | Mlig455_048015 {REF} {Length: 3379} {TRANSSPLICED} {Pfam: Histone deacetylase domain [PF00850.21, score=283.8]} {Human: ENSG00000068024, HDAC4, histone deacetylase 4, [RH, Score=416, Expect=3e-130]; ENSG00000048052, HDAC9, histone deacetylase 9, [RH, Score=410, Expect=1e-128]; ENSG00000108840, HDAC5, histone deacetylase 5, [RH, Score=401, Expect=2e-124]; ENSG00000061273, HDAC7, histone deacetylase 7, [RH, Score=397, Expect=2e-124]} {Mouse: ENSMUSG00000026313, Hdac4, histone deacetylase 4, [RH, Score=414, Expect=5e-130]; ENSMUSG00000004698, Hdac9, histone deacetylase 9, [RH, Score=404, Expect=5e-126]; ENSMUSG00000022475, Hdac7, histone deacetylase 7, [RH, Score=402, Expect=4e-127]; ENSMUSG00000008855, Hdac5, histone deacetylase 5, [RH, Score=399, Expect=7e-124]} {Dmel: FBgn0041210, HDAC4, Histone deacetylase 4, [RH, Score=392, Expect=8e-121]} {Celegans: WBGene00001837, hda-4, Histone deacetylase 4, [RH, Score=379, Expect=9e-119]} {Smed: dd_Smed_v6_9385_0_1, dd_Smed_v6_9385_0_1, [RH, Score=446, Expect=3e-145]} {RNA1509_7849} {RNA1310_8518.1, RNA1509_7849} {RNA1509_7849, RNA815_10834} |
| 3. | MligTC455_03626 | 524 | 10.92 | Mlig455_049233 | Neo: - Age: - Region-enriched R6: 1.780/0.04006 |
2.496 | - | - | - | 0.958 | 0.756 | 0.782 | Mlig455_049233 {REF} {Length: 3030} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=39.3]} {Mouse: ENSMUSG00000045975, C2cd2, C2 calcium-dependent domain containing 2, [Score=50.1, Expect=9e-06]} {Smed: dd_Smed_v6_6358_0_1, dd_Smed_v6_6358_0_1, [RH, Score=66.2, Expect=4e-11]} {RNA1509_40039, RNA1509_43647, RNA1509_44657} {RNA1310_8622, RNA1509_40039, RNA1509_43647, RNA1509_44657} {RNA1509_40039, RNA1509_43647, RNA1509_44657, RNA815_12825} | |
| 4. | MligTC455_18012 | 527 | 10.98 | Mlig455_059356 | Neo: - Age: - |
IQANK1 | 2.483 | - | - | - | 0.729 | 0.970 | 0.784 | Mlig455_059356 {REF} {Length: 2135} {TRANSSPLICED} {Pfam: Ankyrin repeat [PF13606.8, score=35.6]; Ankyrin repeats (3 copies) [PF12796.9, score=35.1]; Ankyrin repeats (many copies) [PF13857.8, score=34.5]; Ankyrin repeat [PF00023.32, score=32.5]; Ankyrin repeats (many copies) [PF13637.8, score=28.5]; ATP-binding dynein motor region [PF12781.9, score=24.4]} {Human: ENSG00000203499, IQANK1, IQ motif and ankyrin repeat containing 1, [RH, Score=333, Expect=1e-106]} {Mouse: ENSMUSG00000102018, K230010J24Rik, RIKEN cDNA K230010J24 gene, [RH, Score=360, Expect=4e-117]} {Dmel: FBgn0031473, CG3104, [Score=68.2, Expect=4e-12]} {Celegans: WBGene00003196, mel-11, MEL-11, [Score=56.2, Expect=6e-08]} {Smed: dd_Smed_v6_15179_0_1, dd_Smed_v6_15179_0_1, [RH, Score=478, Expect=2e-163]} {RNA1509_13601, RNA1509_21987} {RNA1310_2155.2, RNA1509_13601, RNA1509_21987} {RNA1509_13601, RNA1509_21987, RNA815_44759} |
| 5. | MligTC455_51418 | 379 | 7.89 | Mlig455_064315, Mlig455_064347 | Neo: Neoblast Age: Up-Down-Down |
0.961 | - | - | - | - | - | 0.961 | Mlig455_064315 {REF} {Length: 1167} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_16248} {RNA1310_25939} {RNA815_11455} Mlig455_064347 {REF} {Length: 379} {NoTransDecoderORF} {RNA1509_16248} {RNA1310_25939} {RNA815_11455} |
|
| 6. | MligTC455_52927 | 716 | 14.91 | Mlig455_043674 | Neo: - Age: Down-Down-Up |
MAGI2 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_043674 {REF} {Length: 4877} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=220.2]; PDZ domain [PF17820.3, score=142.9]; PDZ domain [PF13180.8, score=87.0]; Guanylate kinase [PF00625.23, score=42.8]; WW domain [PF00397.28, score=35.9]} {Human: ENSG00000187391, MAGI2, membrane associated guanylate kinase, WW and PDZ domain containing 2, [Score=314, Expect=5e-89]} {Mouse: ENSMUSG00000052539, Magi3, membrane associated guanylate kinase, WW and PDZ domain containing 3, [RH, Score=289, Expect=3e-80]} {Dmel: FBgn0034590, Magi, [RH, Score=214, Expect=1e-56]} {Celegans: WBGene00010444, magi-1, MAGI (Membrane Associated Guanylate kinase Inverted) homolog, [RH, Score=311, Expect=1e-89]} {Smed: dd_Smed_v6_854_0_3, dd_Smed_v6_854_0_3, [RH, Score=676, Expect=0.0]} {RNA1509_8632} {RNA1310_3024, RNA1509_8632} {RNA1509_8632, RNA815_10565} |
Berezikov Lab - 2020-2021 © ERIBA