TomoSeq data search

Data search

Results for MligTC455_21442

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21442

746

15.54

Mlig455_005149, Mlig455_021611

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.191

Mlig455_005149 {REF} {Length: 4095} {Pfam: Dynamin family [PF00350.25, score=43.4]; 50S ribosome-binding GTPase [PF01926.25, score=41.1]; AAA ATPase domain [PF13191.8, score=26.2]} {Smed: dd_Smed_v6_7028_0_1, dd_Smed_v6_7028_0_1, [Score=82.8, Expect=5e-16]} {RNA1509_4831} {RNA1310_2619.1} {RNA815_659}

Mlig455_021611 {REF} {Length: 4052} {Pfam: Dynamin family [PF00350.25, score=43.4]; 50S ribosome-binding GTPase [PF01926.25, score=41.1]; AAA ATPase domain [PF13191.8, score=26.2]} {Smed: dd_Smed_v6_7028_0_1, dd_Smed_v6_7028_0_1, [Score=82.8, Expect=5e-16]} {RNA1509_4831} {RNA1310_2619.1, RNA1509_4831} {RNA1509_4831, RNA815_659}

Cumulative graph for MligTC455_21442

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.989	4.328	0.35364	0.99688
RegionR2	-0.514	4.328	0.26899	0.65251
RegionR3	-0.11	4.328	0.75307	1.00000
RegionR4	0.229	4.328	0.61706	0.92742
RegionR5	0.287	4.328	0.35098	0.70040
RegionR6	-0.104	4.328	0.77059	1.00000
RegionR7	-0.263	4.328	0.59346	1.00000
RegionR8	-0.515	4.328	0.41108	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.543	4.328	0.05164	0.70336
RegenerationR2	0.588	4.328	0.11215	0.52282
RegenerationR3	-0.222	4.328	0.59316	0.90487
RegenerationR4	-0.067	4.328	0.87375	1.00000
RegenerationR5	-0.168	4.328	0.66297	0.93733
RegenerationR6	0.236	4.328	0.56094	0.84618
RegenerationBL	1.085	4.328	0.02048	0.15515
RegenerationTP	-0.168	4.328	0.77150	1.00000

Genes with expression patterns similar to MligTC455_21442

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21442	746	15.54	Mlig455_005149, Mlig455_021611	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.191		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005149 {REF} {Length: 4095} {Pfam: Dynamin family [PF00350.25, score=43.4]; 50S ribosome-binding GTPase [PF01926.25, score=41.1]; AAA ATPase domain [PF13191.8, score=26.2]} {Smed: dd_Smed_v6_7028_0_1, dd_Smed_v6_7028_0_1, [Score=82.8, Expect=5e-16]} {RNA1509_4831} {RNA1310_2619.1} {RNA815_659} Mlig455_021611 {REF} {Length: 4052} {Pfam: Dynamin family [PF00350.25, score=43.4]; 50S ribosome-binding GTPase [PF01926.25, score=41.1]; AAA ATPase domain [PF13191.8, score=26.2]} {Smed: dd_Smed_v6_7028_0_1, dd_Smed_v6_7028_0_1, [Score=82.8, Expect=5e-16]} {RNA1509_4831} {RNA1310_2619.1, RNA1509_4831} {RNA1509_4831, RNA815_659}
2.	MligTC455_30553	211	4.39	Mlig455_070823	Neo: - Age: -	WNK4	1.662	-	-	-	-	0.957	0.705	Mlig455_070823 {REF} {Length: 1633} {Pfam: Protein kinase domain [PF00069.27, score=60.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=48.9]; Ankyrin repeats (many copies) [PF13857.8, score=23.5]; Ankyrin repeats (3 copies) [PF12796.9, score=23.1]; Ankyrin repeats (many copies) [PF13637.8, score=20.6]; Phosphotransferase enzyme family [PF01636.25, score=19.4]} {Human: ENSG00000126562, WNK4, WNK lysine deficient protein kinase 4, [Score=59.7, Expect=1e-09]} {Mouse: ENSMUSG00000035112, Wnk4, WNK lysine deficient protein kinase 4, [Score=59.7, Expect=1e-09]} {Dmel: FBgn0039015, Takl2, Tak1-like 2, [Score=64.3, Expect=9e-12]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=57.0, Expect=5e-09]} {Smed: dd_Smed_v6_5255_0_1, dd_Smed_v6_5255_0_1, [Score=55.5, Expect=8e-09]} {RNA1509_44216} {RNA1310_10050} {RNA815_11398.1}
3.	MligTC455_47900	1097	22.85	Mlig455_020507	Neo: - Age: -	BIRC7	0.963	-	-	-	-	0.963	-	Mlig455_020507 {REF} {Length: 2741} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=70.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=44.8]} {Human: ENSG00000101197, BIRC7, baculoviral IAP repeat containing 7, [RH, Score=73.2, Expect=9e-14]} {Mouse: ENSMUSG00000057367, Birc2, baculoviral IAP repeat-containing 2, [Score=62.0, Expect=8e-10]} {Dmel: FBgn0260635, Diap1, Death-associated inhibitor of apoptosis 1, [Score=65.1, Expect=4e-11]} {Smed: dd_Smed_v6_4626_0_1, dd_Smed_v6_4626_0_1, [RH, Score=69.3, Expect=1e-12]} {RNA1509_2922} {RNA1310_8107.1} {RNA815_2527}
4.	MligTC455_49424	368	7.67	Mlig455_051752	Neo: - Age: Down-Up-Down	PPM1D	0.955	-	-	-	0.955	-	-	Mlig455_051752 {REF} {Length: 3711} {Pfam: Protein phosphatase 2C [PF00481.23, score=213.0]} {Human: ENSG00000170836, PPM1D, protein phosphatase, Mg2+/Mn2+ dependent 1D, [RH, Score=270, Expect=5e-82]} {Mouse: ENSMUSG00000020525, Ppm1d, protein phosphatase 1D magnesium-dependent, delta isoform, [RH, Score=268, Expect=2e-81]} {Dmel: FBgn0022768, Pp2C1, Protein phosphatase 2C, [RH, Score=306, Expect=6e-91]} {Celegans: WBGene00021856, Y54F10BM.1, [RH, Score=251, Expect=5e-74]} {Smed: dd_Smed_v6_56771_0_1, dd_Smed_v6_56771_0_1, [RH, Score=376, Expect=4e-127]} {RNA1509_9938} {RNA1310_10931} {RNA815_1300}
5.	MligTC455_17047	353	7.36	Mlig455_008112	Neo: - Age: Down-Up-Up Region-enriched R4: 1.966/0.03620		0.954	-	-	0.954	-	-	-	Mlig455_008112 {REF} {Length: 1341} {RNA1509_23731} {RNA1310_20367.2} {RNA815_10999}
6.	MligTC455_44591	1042	21.7	Mlig455_013859	Neo: - Age: -	AKNA	0.953	-	-	-	-	0.953	-	Mlig455_013859 {REF} {Length: 5923} {TRANSSPLICED} {Human: ENSG00000106948, AKNA, AT-hook transcription factor, [RH, Score=52.4, Expect=7e-06]} {Mouse: ENSMUSG00000039158, Akna, AT-hook transcription factor, [Score=53.9, Expect=2e-06]} {Smed: dd_Smed_v6_5190_0_1, dd_Smed_v6_5190_0_1, [Score=49.7, Expect=1e-05]} {RNA1509_4010} {RNA1310_713} {RNA815_511.1}

Berezikov Lab - 2020-2021 © ERIBA