Data search


search
Exact
Search

Results for MligTC455_17047

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17047 353 7.36 Mlig455_008112

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.966/0.03620

Mlig455_008112 {REF} {Length: 1341} {RNA1509_23731} {RNA1310_20367.2} {RNA815_10999}

Cumulative graph for MligTC455_17047

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.066 3.3 0.03311 0.46009
RegionR2 0.182 3.3 0.77234 1.00000
RegionR3 0.317 3.3 0.69348 1.00000
RegionR4 1.966 3.3 0.00498 0.03620
RegionR5 1.033 3.3 0.15895 0.41904
RegionR6 1.379 3.3 0.03693 0.35890
RegionR7 1.491 3.3 0.05155 0.43684
RegionR8 0.697 3.3 0.52110 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.237 3.3 1.00000 1.00000
RegenerationR2 -0.481 3.3 0.20873 0.65615
RegenerationR3 -0.581 3.3 0.21250 0.64815
RegenerationR4 -1.05 3.3 0.01885 0.21551
RegenerationR5 -1.141 3.3 0.00831 0.16496
RegenerationR6 -1.33 3.3 0.00271 0.05962
RegenerationBL -2.384 3.3 0.00076 0.01904
RegenerationTP -0.145 3.3 0.80026 1.00000


Genes with expression patterns similar to MligTC455_17047

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17047 353 7.36 Mlig455_008112

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.966/0.03620

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_008112 {REF} {Length: 1341} {RNA1509_23731} {RNA1310_20367.2} {RNA815_10999}
2. MligTC455_50316 373 7.77 Mlig455_051680

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.313

2.518 - 0.727 0.837 0.954 - - Mlig455_051680 {REF} {Length: 1191} {RNA1509_19772} {RNA1310_39074, RNA1509_19772} {RNA1509_19772, RNA815_13603}
3. MligTC455_21122 247 5.14 Mlig455_025099

Neo: -

Age: -

SCAI 2.472 - - - 0.950 0.796 0.726 Mlig455_025099 {REF} {Length: 4572} {Pfam: Protein SCAI [PF12070.10, score=720.7]} {Human: ENSG00000173611, SCAI, suppressor of cancer cell invasion, [Score=359, Expect=8e-117]} {Mouse: ENSMUSG00000035236, Scai, suppressor of cancer cell invasion, [Score=357, Expect=4e-116]} {Dmel: FBgn0035677, CG13293, [RH, Score=647, Expect=0.0]} {Smed: dd_Smed_v6_13420_0_1, dd_Smed_v6_13420_0_1, [RH, Score=637, Expect=0.0]} {RNA1509_47392} {RNA1310_6699.1, RNA1509_47392} {RNA1509_47392, RNA815_18726}
4. MligTC455_45636 3589 74.77 Mlig455_002987, Mlig455_055611

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.572

GNAS 1.765 - - 0.974 0.791 - -

Mlig455_002987 {REF} {Length: 1992} {Pfam: G-protein alpha subunit [PF00503.22, score=307.5]; ADP-ribosylation factor family [PF00025.23, score=44.8]} {Human: ENSG00000087460, GNAS, GNAS complex locus, [Score=427, Expect=1e-148]; ENSG00000141404, GNAL, G protein subunit alpha L, [Score=420, Expect=1e-145]} {Mouse: ENSMUSG00000027523, Gnas, GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus, [Score=426, Expect=4e-148]; ENSMUSG00000024524, Gnal, guanine nucleotide binding protein, alpha stimulating, olfactory type, [Score=418, Expect=3e-145]} {Dmel: FBgn0001123, Galphas, G protein alpha s subunit, [Score=438, Expect=4e-153]} {Celegans: WBGene00001745, gsa-1, G protein, Subunit Alpha, [Score=381, Expect=8e-131]} {Smed: dd_Smed_v6_9665_0_1, dd_Smed_v6_9665_0_1, [RH, Score=447, Expect=3e-157]} {RNA1509_8741} {RNA1310_16150.1, RNA1509_8741} {RNA1509_8741, RNA815_6123}

Mlig455_055611 {REF} {Length: 1953} {Pfam: G-protein alpha subunit [PF00503.22, score=252.3]; ADP-ribosylation factor family [PF00025.23, score=41.6]} {Human: ENSG00000087460, GNAS, GNAS complex locus, [Score=362, Expect=5e-125]; ENSG00000141404, GNAL, G protein subunit alpha L, [Score=344, Expect=1e-117]} {Mouse: ENSMUSG00000027523, Gnas, GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus, [Score=362, Expect=5e-125]; ENSMUSG00000024524, Gnal, guanine nucleotide binding protein, alpha stimulating, olfactory type, [Score=344, Expect=7e-118]} {Dmel: FBgn0001123, Galphas, G protein alpha s subunit, [Score=378, Expect=2e-131]} {Celegans: WBGene00001745, gsa-1, G protein, Subunit Alpha, [Score=309, Expect=2e-104]} {Smed: dd_Smed_v6_6167_0_1, dd_Smed_v6_6167_0_1, [Score=372, Expect=4e-129]} {RNA1509_4259} {RNA1310_16150.1, RNA1509_4259} {RNA1509_4259, RNA815_6123}
5. MligTC455_48314 289 6.03 Mlig455_007191, Mlig455_007262

Neo: -

Age: logFC(26M/2M)=-0.642

SVOP 1.678 - - - - 0.709 0.969

Mlig455_007191 {REF} {Length: 2304} {Pfam: Sugar (and other) transporter [PF00083.26, score=60.9]; Major Facilitator Superfamily [PF07690.18, score=32.0]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=173, Expect=4e-49]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=163, Expect=1e-45]} {Dmel: FBgn0034956, CG4324, [Score=149, Expect=7e-41]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=171, Expect=7e-49]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=186, Expect=5e-55]} {RNA1509_56107} {RNA1310_13096} {RNA815_26584}

Mlig455_007262 {REF} {Length: 2058} {Pfam: Sugar (and other) transporter [PF00083.26, score=115.4]; Major Facilitator Superfamily [PF07690.18, score=114.5]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=317, Expect=2e-101]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=311, Expect=3e-99]} {Dmel: FBgn0034956, CG4324, [Score=252, Expect=2e-77]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=301, Expect=3e-96]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=335, Expect=1e-109]} {RNA1509_56107} {RNA1310_12870} {RNA815_26584}
6. MligTC455_10545 1083 22.57 Mlig455_061540

Neo: -

Age: -

RIOK3 0.964 - - - 0.964 - - Mlig455_061540 {REF} {Length: 1838} {TRANSSPLICED} {Pfam: RIO1 family [PF01163.24, score=78.6]} {Human: ENSG00000101782, RIOK3, RIO kinase 3, [Score=219, Expect=4e-64]} {Mouse: ENSMUSG00000024404, Riok3, RIO kinase 3, [Score=224, Expect=3e-66]} {Dmel: FBgn0031643, CG3008, [Score=151, Expect=5e-39]} {Celegans: WBGene00014012, riok-3, Serine/threonine-protein kinase RIO3, [Score=106, Expect=4e-24]} {RNA1509_19648} {RNA1310_14682, RNA1509_19648} {RNA1509_19648, RNA815_16143}
7. MligTC455_44079 1323 27.57 Mlig455_047930

Neo: -

Age: -

Region-enriched R7: 1.576/0.00031

NINL 0.955 - - - 0.955 - - Mlig455_047930 {REF} {Length: 11095} {Pfam: EF-hand domain pair [PF13499.8, score=38.2]; EF-hand domain [PF13405.8, score=27.5]; EF hand [PF00036.34, score=27.1]; EF-hand domain pair [PF13833.8, score=23.8]; Apg6 coiled-coil region [PF17675.3, score=20.0]} {Human: ENSG00000101004, NINL, ninein like, [Score=179, Expect=2e-44]} {Mouse: ENSMUSG00000068115, Ninl, ninein-like, [RH, Score=184, Expect=7e-46]} {Dmel: FBgn0000228, Bsg25D, Blastoderm-specific gene 25D, [Score=53.9, Expect=3e-06]} {Smed: dd_Smed_v6_16759_0_1, dd_Smed_v6_16759_0_1, [RH, Score=116, Expect=9e-26]} {RNA1509_39438} {RNA1310_1168} {RNA815_102.1}
8. MligTC455_21442 746 15.54 Mlig455_005149, Mlig455_021611

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.191

0.954 - - 0.954 - - -

Mlig455_005149 {REF} {Length: 4095} {Pfam: Dynamin family [PF00350.25, score=43.4]; 50S ribosome-binding GTPase [PF01926.25, score=41.1]; AAA ATPase domain [PF13191.8, score=26.2]} {Smed: dd_Smed_v6_7028_0_1, dd_Smed_v6_7028_0_1, [Score=82.8, Expect=5e-16]} {RNA1509_4831} {RNA1310_2619.1} {RNA815_659}

Mlig455_021611 {REF} {Length: 4052} {Pfam: Dynamin family [PF00350.25, score=43.4]; 50S ribosome-binding GTPase [PF01926.25, score=41.1]; AAA ATPase domain [PF13191.8, score=26.2]} {Smed: dd_Smed_v6_7028_0_1, dd_Smed_v6_7028_0_1, [Score=82.8, Expect=5e-16]} {RNA1509_4831} {RNA1310_2619.1, RNA1509_4831} {RNA1509_4831, RNA815_659}
9. MligTC455_18029 459 9.55 Mlig455_006976

Neo: -

Age: -

0.952 - - - 0.952 - - Mlig455_006976 {REF} {Length: 595} {NoTransDecoderORF} {RNA1310_56472} {RNA815_14182.2}
10. MligTC455_38737 486 10.12 Mlig455_000809, Mlig455_067275

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.722

CALM2 0.95 - - - 0.950 - -

Mlig455_000809 {REF} {Length: 2373} {Pfam: EF-hand domain pair [PF13499.8, score=86.2]; EF hand [PF00036.34, score=70.0]; EF-hand domain pair [PF13833.8, score=58.9]; EF-hand domain [PF13405.8, score=57.4]; EF hand [PF13202.8, score=40.1]; EF-hand domain [PF14658.8, score=26.4]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=102, Expect=2e-25]; ENSG00000198668, CALM1, calmodulin 1, [Score=99.0, Expect=1e-24]; ENSG00000160014, CALM3, calmodulin 3, [Score=98.6, Expect=1e-24]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=104, Expect=1e-26]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=99.4, Expect=3e-25]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=99.0, Expect=3e-25]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=99.0, Expect=3e-25]} {RNA1509_22752} {RNA1310_16668.1, RNA1509_22752} {RNA1509_22752, RNA815_10085.1}

Mlig455_067275 {REF} {Length: 2268} {Pfam: EF-hand domain pair [PF13499.8, score=86.2]; EF hand [PF00036.34, score=70.0]; EF-hand domain pair [PF13833.8, score=58.9]; EF-hand domain [PF13405.8, score=57.4]; EF hand [PF13202.8, score=40.1]; EF-hand domain [PF14658.8, score=26.4]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=102, Expect=2e-25]; ENSG00000198668, CALM1, calmodulin 1, [Score=99.0, Expect=1e-24]; ENSG00000160014, CALM3, calmodulin 3, [Score=98.6, Expect=1e-24]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=104, Expect=1e-26]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=99.4, Expect=3e-25]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=99.0, Expect=3e-25]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=99.0, Expect=3e-25]} {RNA1509_22608, RNA1509_22752} {RNA1310_16668.1, RNA1509_22608} {RNA1509_22608, RNA815_10085.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA