Data search
Results for MligTC455_21483
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21483 | 848 | 17.66 | Mlig455_069103 | Neo: - Age: logFC(26M/2M)=0.385 |
SMARCA4 | Mlig455_069103 {REF} {Length: 4676} {Pfam: Bromodomain [PF00439.27, score=69.0]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [Score=121, Expect=2e-28]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [Score=117, Expect=4e-30]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [Score=120, Expect=2e-28]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [Score=116, Expect=8e-30]} {Dmel: FBgn0000212, brm, brahma, [Score=102, Expect=2e-22]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [Score=89.7, Expect=1e-18]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [Score=135, Expect=7e-34]} {RNA1509_12350} {RNA1310_337.1} {RNA815_9484.1} |
Cumulative graph for MligTC455_21483
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.387 | 4.478 | 0.28799 | 0.94009 | |
| RegionR2 | 0.506 | 4.478 | 0.23503 | 0.60851 | |
| RegionR3 | -0.194 | 4.478 | 0.61411 | 1.00000 | |
| RegionR4 | 0.379 | 4.478 | 0.35055 | 0.67207 | |
| RegionR5 | 0.29 | 4.478 | 0.37160 | 0.72458 | |
| RegionR6 | -0.16 | 4.478 | 0.68303 | 1.00000 | |
| RegionR7 | 0.224 | 4.478 | 0.64071 | 1.00000 | |
| RegionR8 | 0.34 | 4.478 | 0.57964 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.437 | 4.478 | 0.83499 | 1.00000 | |
| RegenerationR2 | 0.005 | 4.478 | 0.98873 | 1.00000 | |
| RegenerationR3 | 0.38 | 4.478 | 0.29840 | 0.72971 | |
| RegenerationR4 | -0.151 | 4.478 | 0.67592 | 0.94421 | |
| RegenerationR5 | 0.475 | 4.478 | 0.13430 | 0.54276 | |
| RegenerationR6 | 0.647 | 4.478 | 0.07252 | 0.33657 | |
| RegenerationBL | 0.568 | 4.478 | 0.17115 | 0.49604 | |
| RegenerationTP | -0.687 | 4.478 | 0.19715 | 0.63672 |
Genes with expression patterns similar to MligTC455_21483
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21483 | 848 | 17.66 | Mlig455_069103 | Neo: - Age: logFC(26M/2M)=0.385 |
SMARCA4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_069103 {REF} {Length: 4676} {Pfam: Bromodomain [PF00439.27, score=69.0]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [Score=121, Expect=2e-28]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [Score=117, Expect=4e-30]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [Score=120, Expect=2e-28]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [Score=116, Expect=8e-30]} {Dmel: FBgn0000212, brm, brahma, [Score=102, Expect=2e-22]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [Score=89.7, Expect=1e-18]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [Score=135, Expect=7e-34]} {RNA1509_12350} {RNA1310_337.1} {RNA815_9484.1} |
| 2. | MligTC455_21484 | 859 | 17.9 | Mlig455_066724, Mlig455_066738 | Neo: - Age: Up-Down-Down |
SMARCA4 | 5.941 | 0.999 | 0.983 | 0.990 | 0.982 | 0.995 | 0.992 | Mlig455_066724 {REF} {Length: 6429} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=253.6]; Helicase conserved C-terminal domain [PF00271.33, score=71.6]; Bromodomain [PF00439.27, score=67.6]; Snf2-ATP coupling, chromatin remodelling complex [PF14619.8, score=47.6]; QLQ [PF08880.13, score=44.9]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; BRK domain [PF07533.18, score=42.4]; HSA [PF07529.15, score=39.3]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=27.3]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1274, Expect=0.0]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1261, Expect=0.0]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1270, Expect=0.0]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1264, Expect=0.0]} {Dmel: FBgn0000212, brm, brahma, [RH, Score=1186, Expect=0.0]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [RH, Score=1092, Expect=0.0]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [RH, Score=1261, Expect=0.0]} {RNA1509_12350} {RNA1310_706} {RNA815_1261} Mlig455_066738 {REF} {Length: 211} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=253.6]; Helicase conserved C-terminal domain [PF00271.33, score=71.6]; Bromodomain [PF00439.27, score=67.6]; Snf2-ATP coupling, chromatin remodelling complex [PF14619.8, score=47.6]; QLQ [PF08880.13, score=44.9]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; BRK domain [PF07533.18, score=42.4]; HSA [PF07529.15, score=39.3]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=27.3]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1274, Expect=0.0]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1261, Expect=0.0]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1270, Expect=0.0]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1264, Expect=0.0]} {Dmel: FBgn0000212, brm, brahma, [RH, Score=1186, Expect=0.0]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [RH, Score=1092, Expect=0.0]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [RH, Score=1261, Expect=0.0]} {RNA1509_31848} {RNA1310_706} {RNA815_29239} |
| 3. | MligTC455_20053 | 174 | 3.62 | Mlig455_034750 | Neo: - Age: - Region-enriched R5: 2.122/0.04969 |
1.696 | - | - | 0.737 | 0.959 | - | - | Mlig455_034750 {REF} {Length: 1010} {TRANSSPLICED} {RNA1509_57195} {RNA1310_35663, RNA1509_57195} {RNA1509_57195, RNA815_38287} | |
| 4. | MligTC455_51440 | 227 | 4.73 | Mlig455_058573 | Neo: - Age: Up-Down-Down |
RICTOR | 0.958 | - | - | - | - | - | 0.958 | Mlig455_058573 {REF} {Length: 13446} {Pfam: Rapamycin-insensitive companion of mTOR, N-term [PF14664.8, score=125.5]; Rapamycin-insensitive companion of mTOR, domain 5 [PF14668.8, score=65.9]; Rapamycin-insensitive companion of mTOR RasGEF_N domain [PF14663.8, score=43.7]} {Human: ENSG00000164327, RICTOR, RPTOR independent companion of MTOR complex 2, [Score=206, Expect=6e-53]} {Mouse: ENSMUSG00000050310, Rictor, RPTOR independent companion of MTOR, complex 2, [Score=134, Expect=8e-31]} {Dmel: FBgn0031006, rictor, rapamycin-insensitive companion of Tor, [Score=91.3, Expect=6e-18]} {Celegans: WBGene00009245, rict-1, [Score=55.5, Expect=3e-07]} {Smed: dd_Smed_v6_9324_0_9, dd_Smed_v6_9324_0_9, [Score=102, Expect=7e-22]} {RNA1509_10068, RNA1509_23509} {RNA1310_7671.1, RNA1509_10068} {RNA1509_10068, RNA815_19433} |
| 5. | MligTC455_23644 | 492 | 10.25 | Mlig455_026068, Mlig455_037312 | Neo: - Age: - Region-enriched R5: 2.322/0.00401 |
0.955 | - | - | - | - | - | 0.955 | Mlig455_026068 {REF} {Length: 3653} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=33.8]; Striatin family [PF08232.14, score=21.0]} {Smed: dd_Smed_v6_7378_0_1, dd_Smed_v6_7378_0_1, [Score=52.0, Expect=6e-08]} {RNA1509_13710} {RNA1310_7068} {RNA815_10709} Mlig455_037312 {REF} {Length: 3770} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=39.8]} {Smed: dd_Smed_v6_7378_0_2, dd_Smed_v6_7378_0_2, [RH, Score=53.9, Expect=3e-08]} {RNA1509_13710} {RNA1310_7068} {RNA815_10709} |