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Results for MligTC455_21484

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21484	859	17.90	Mlig455_066724, Mlig455_066738	Neo: - Age: Up-Down-Down	SMARCA4	Mlig455_066724 {REF} {Length: 6429} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=253.6]; Helicase conserved C-terminal domain [PF00271.33, score=71.6]; Bromodomain [PF00439.27, score=67.6]; Snf2-ATP coupling, chromatin remodelling complex [PF14619.8, score=47.6]; QLQ [PF08880.13, score=44.9]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; BRK domain [PF07533.18, score=42.4]; HSA [PF07529.15, score=39.3]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=27.3]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1274, Expect=0.0]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1261, Expect=0.0]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1270, Expect=0.0]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1264, Expect=0.0]} {Dmel: FBgn0000212, brm, brahma, [RH, Score=1186, Expect=0.0]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [RH, Score=1092, Expect=0.0]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [RH, Score=1261, Expect=0.0]} {RNA1509_12350} {RNA1310_706} {RNA815_1261} Mlig455_066738 {REF} {Length: 211} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=253.6]; Helicase conserved C-terminal domain [PF00271.33, score=71.6]; Bromodomain [PF00439.27, score=67.6]; Snf2-ATP coupling, chromatin remodelling complex [PF14619.8, score=47.6]; QLQ [PF08880.13, score=44.9]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; BRK domain [PF07533.18, score=42.4]; HSA [PF07529.15, score=39.3]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=27.3]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1274, Expect=0.0]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1261, Expect=0.0]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1270, Expect=0.0]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1264, Expect=0.0]} {Dmel: FBgn0000212, brm, brahma, [RH, Score=1186, Expect=0.0]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [RH, Score=1092, Expect=0.0]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [RH, Score=1261, Expect=0.0]} {RNA1509_31848} {RNA1310_706} {RNA815_29239}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21484

859

17.90

Mlig455_066724, Mlig455_066738

Neo: -

Age: Up-Down-Down

SMARCA4

Mlig455_066724 {REF} {Length: 6429} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=253.6]; Helicase conserved C-terminal domain [PF00271.33, score=71.6]; Bromodomain [PF00439.27, score=67.6]; Snf2-ATP coupling, chromatin remodelling complex [PF14619.8, score=47.6]; QLQ [PF08880.13, score=44.9]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; BRK domain [PF07533.18, score=42.4]; HSA [PF07529.15, score=39.3]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=27.3]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1274, Expect=0.0]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1261, Expect=0.0]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1270, Expect=0.0]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1264, Expect=0.0]} {Dmel: FBgn0000212, brm, brahma, [RH, Score=1186, Expect=0.0]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [RH, Score=1092, Expect=0.0]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [RH, Score=1261, Expect=0.0]} {RNA1509_12350} {RNA1310_706} {RNA815_1261}

Mlig455_066738 {REF} {Length: 211} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=253.6]; Helicase conserved C-terminal domain [PF00271.33, score=71.6]; Bromodomain [PF00439.27, score=67.6]; Snf2-ATP coupling, chromatin remodelling complex [PF14619.8, score=47.6]; QLQ [PF08880.13, score=44.9]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; BRK domain [PF07533.18, score=42.4]; HSA [PF07529.15, score=39.3]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=27.3]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1274, Expect=0.0]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1261, Expect=0.0]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1270, Expect=0.0]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1264, Expect=0.0]} {Dmel: FBgn0000212, brm, brahma, [RH, Score=1186, Expect=0.0]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [RH, Score=1092, Expect=0.0]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [RH, Score=1261, Expect=0.0]} {RNA1509_31848} {RNA1310_706} {RNA815_29239}

Cumulative graph for MligTC455_21484

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.471	4.494	0.25439	0.90224
RegionR2	0.472	4.494	0.26013	0.64126
RegionR3	-0.205	4.494	0.58887	1.00000
RegionR4	0.304	4.494	0.44261	0.77115
RegionR5	0.229	4.494	0.47447	0.83736
RegionR6	-0.061	4.494	0.87429	1.00000
RegionR7	0.408	4.494	0.37552	1.00000
RegionR8	0.323	4.494	0.59686	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.414	4.494	0.84356	1.00000
RegenerationR2	0.029	4.494	0.92396	1.00000
RegenerationR3	0.37	4.494	0.29840	0.72971
RegenerationR4	-0.151	4.494	0.66542	0.94044
RegenerationR5	0.483	4.494	0.11630	0.51281
RegenerationR6	0.637	4.494	0.06647	0.32372
RegenerationBL	0.403	4.494	0.32631	0.69289
RegenerationTP	-0.644	4.494	0.21077	0.65320

Genes with expression patterns similar to MligTC455_21484

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21484	859	17.9	Mlig455_066724, Mlig455_066738	Neo: - Age: Up-Down-Down	SMARCA4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_066724 {REF} {Length: 6429} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=253.6]; Helicase conserved C-terminal domain [PF00271.33, score=71.6]; Bromodomain [PF00439.27, score=67.6]; Snf2-ATP coupling, chromatin remodelling complex [PF14619.8, score=47.6]; QLQ [PF08880.13, score=44.9]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; BRK domain [PF07533.18, score=42.4]; HSA [PF07529.15, score=39.3]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=27.3]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1274, Expect=0.0]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1261, Expect=0.0]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1270, Expect=0.0]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1264, Expect=0.0]} {Dmel: FBgn0000212, brm, brahma, [RH, Score=1186, Expect=0.0]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [RH, Score=1092, Expect=0.0]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [RH, Score=1261, Expect=0.0]} {RNA1509_12350} {RNA1310_706} {RNA815_1261} Mlig455_066738 {REF} {Length: 211} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=253.6]; Helicase conserved C-terminal domain [PF00271.33, score=71.6]; Bromodomain [PF00439.27, score=67.6]; Snf2-ATP coupling, chromatin remodelling complex [PF14619.8, score=47.6]; QLQ [PF08880.13, score=44.9]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; BRK domain [PF07533.18, score=42.4]; HSA [PF07529.15, score=39.3]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=27.3]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1274, Expect=0.0]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1261, Expect=0.0]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1270, Expect=0.0]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1264, Expect=0.0]} {Dmel: FBgn0000212, brm, brahma, [RH, Score=1186, Expect=0.0]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [RH, Score=1092, Expect=0.0]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [RH, Score=1261, Expect=0.0]} {RNA1509_31848} {RNA1310_706} {RNA815_29239}
2.	MligTC455_21483	848	17.66	Mlig455_069103	Neo: - Age: logFC(26M/2M)=0.385	SMARCA4	5.941	0.999	0.983	0.990	0.982	0.995	0.992	Mlig455_069103 {REF} {Length: 4676} {Pfam: Bromodomain [PF00439.27, score=69.0]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [Score=121, Expect=2e-28]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [Score=117, Expect=4e-30]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [Score=120, Expect=2e-28]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [Score=116, Expect=8e-30]} {Dmel: FBgn0000212, brm, brahma, [Score=102, Expect=2e-22]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [Score=89.7, Expect=1e-18]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [Score=135, Expect=7e-34]} {RNA1509_12350} {RNA1310_337.1} {RNA815_9484.1}
3.	MligTC455_22520	1063	22.15	Mlig455_000386, Mlig455_067959	Neo: Irradiation Age: Up-Down-Down	TRANK1	1.727	-	-	-	-	0.769	0.958	Mlig455_000386 {REF} {Length: 10595} {TRANSSPLICED} {Pfam: AAA domain [PF13245.8, score=31.4]; UvrD/REP helicase N-terminal domain [PF00580.23, score=28.5]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.6]} {Human: ENSG00000168016, TRANK1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=676, Expect=0.0]} {Mouse: ENSMUSG00000062296, Trank1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=667, Expect=0.0]} {RNA1509_45240, RNA1509_48487} {RNA1310_139, RNA1509_45240} {RNA1509_45240, RNA815_523} Mlig455_067959 {REF} {Length: 11658} {TRANSSPLICED} {Pfam: AAA domain [PF13245.8, score=31.4]; UvrD/REP helicase N-terminal domain [PF00580.23, score=29.4]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.8]} {Human: ENSG00000168016, TRANK1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=679, Expect=0.0]} {Mouse: ENSMUSG00000062296, Trank1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=667, Expect=0.0]} {RNA1509_26643, RNA1509_4147, RNA1509_52069} {RNA1310_139, RNA1509_26643, RNA1509_4147, RNA1509_52069} {RNA1509_26643, RNA1509_4147, RNA1509_52069, RNA815_523}
4.	MligTC455_51440	227	4.73	Mlig455_058573	Neo: - Age: Up-Down-Down	RICTOR	1.722	-	-	-	0.760	-	0.962	Mlig455_058573 {REF} {Length: 13446} {Pfam: Rapamycin-insensitive companion of mTOR, N-term [PF14664.8, score=125.5]; Rapamycin-insensitive companion of mTOR, domain 5 [PF14668.8, score=65.9]; Rapamycin-insensitive companion of mTOR RasGEF_N domain [PF14663.8, score=43.7]} {Human: ENSG00000164327, RICTOR, RPTOR independent companion of MTOR complex 2, [Score=206, Expect=6e-53]} {Mouse: ENSMUSG00000050310, Rictor, RPTOR independent companion of MTOR, complex 2, [Score=134, Expect=8e-31]} {Dmel: FBgn0031006, rictor, rapamycin-insensitive companion of Tor, [Score=91.3, Expect=6e-18]} {Celegans: WBGene00009245, rict-1, [Score=55.5, Expect=3e-07]} {Smed: dd_Smed_v6_9324_0_9, dd_Smed_v6_9324_0_9, [Score=102, Expect=7e-22]} {RNA1509_10068, RNA1509_23509} {RNA1310_7671.1, RNA1509_10068} {RNA1509_10068, RNA815_19433}
5.	MligTC455_20053	174	3.62	Mlig455_034750	Neo: - Age: - Region-enriched R5: 2.122/0.04969		1.677	-	-	0.715	0.962	-	-	Mlig455_034750 {REF} {Length: 1010} {TRANSSPLICED} {RNA1509_57195} {RNA1310_35663, RNA1509_57195} {RNA1509_57195, RNA815_38287}
6.	MligTC455_23644	492	10.25	Mlig455_026068, Mlig455_037312	Neo: - Age: - Region-enriched R5: 2.322/0.00401		0.964	-	-	-	-	-	0.964	Mlig455_026068 {REF} {Length: 3653} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=33.8]; Striatin family [PF08232.14, score=21.0]} {Smed: dd_Smed_v6_7378_0_1, dd_Smed_v6_7378_0_1, [Score=52.0, Expect=6e-08]} {RNA1509_13710} {RNA1310_7068} {RNA815_10709} Mlig455_037312 {REF} {Length: 3770} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=39.8]} {Smed: dd_Smed_v6_7378_0_2, dd_Smed_v6_7378_0_2, [RH, Score=53.9, Expect=3e-08]} {RNA1509_13710} {RNA1310_7068} {RNA815_10709}