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Results for MligTC455_21541

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21541 505 10.52 Mlig455_031944

Neo: Int S/G2/M

Age: -

 GFM1 Mlig455_031944 {REF} {Length: 3123} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=202.5]; Elongation factor G, domain IV [PF03764.20, score=123.8]; Elongation Factor G, domain III [PF14492.8, score=93.4]; Elongation factor G C-terminus [PF00679.26, score=81.0]; Elongation factor Tu domain 2 [PF03144.27, score=55.2]; Class II release factor RF3, C-terminal domain [PF16658.7, score=29.9]} {Human: ENSG00000168827, GFM1, G elongation factor mitochondrial 1, [RH, Score=898, Expect=0.0]} {Mouse: ENSMUSG00000027774, Gfm1, G elongation factor, mitochondrial 1, [RH, Score=907, Expect=0.0]} {Dmel: FBgn0263133, mEFG1, mitochondrial translation elongation factor G 1, [RH, Score=952, Expect=0.0]} {Celegans: WBGene00009246, gfm-1, Elongation factor G, mitochondrial, [RH, Score=816, Expect=0.0]} {Smed: dd_Smed_v6_1879_0_1, dd_Smed_v6_1879_0_1, [RH, Score=919, Expect=0.0]} {RNA1509_11689, RNA1509_16105, RNA1509_42683} {RNA1310_6805.2, RNA1509_11689, RNA1509_16105, RNA1509_42683} {RNA1509_11689, RNA1509_16105, RNA1509_42683, RNA815_2051}

Cumulative graph for MligTC455_21541

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.424 3.851 0.67348 1.00000
RegionR2 0.586 3.851 0.25920 0.63996
RegionR3 0.317 3.851 0.37756 0.91067
RegionR4 -0.316 3.851 0.54105 0.86326
RegionR5 0.333 3.851 0.30054 0.63594
RegionR6 -0.236 3.851 0.54763 1.00000
RegionR7 -0.425 3.851 0.41967 1.00000
RegionR8 -0.683 3.851 0.30235 0.93327

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.268 3.851 0.29954 0.99621
RegenerationR2 0.065 3.851 0.88453 1.00000
RegenerationR3 0.384 3.851 0.42280 0.81735
RegenerationR4 0.882 3.851 0.08709 0.46372
RegenerationR5 0.099 3.851 0.80515 0.98981
RegenerationR6 0.386 3.851 0.46321 0.78031
RegenerationBL 0.754 3.851 0.31115 0.67670
RegenerationTP 0.042 3.851 0.95648 1.00000


Genes with expression patterns similar to MligTC455_21541

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21541 505 10.52 Mlig455_031944

Neo: Int S/G2/M

Age: -

 GFM1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_031944 {REF} {Length: 3123} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=202.5]; Elongation factor G, domain IV [PF03764.20, score=123.8]; Elongation Factor G, domain III [PF14492.8, score=93.4]; Elongation factor G C-terminus [PF00679.26, score=81.0]; Elongation factor Tu domain 2 [PF03144.27, score=55.2]; Class II release factor RF3, C-terminal domain [PF16658.7, score=29.9]} {Human: ENSG00000168827, GFM1, G elongation factor mitochondrial 1, [RH, Score=898, Expect=0.0]} {Mouse: ENSMUSG00000027774, Gfm1, G elongation factor, mitochondrial 1, [RH, Score=907, Expect=0.0]} {Dmel: FBgn0263133, mEFG1, mitochondrial translation elongation factor G 1, [RH, Score=952, Expect=0.0]} {Celegans: WBGene00009246, gfm-1, Elongation factor G, mitochondrial, [RH, Score=816, Expect=0.0]} {Smed: dd_Smed_v6_1879_0_1, dd_Smed_v6_1879_0_1, [RH, Score=919, Expect=0.0]} {RNA1509_11689, RNA1509_16105, RNA1509_42683} {RNA1310_6805.2, RNA1509_11689, RNA1509_16105, RNA1509_42683} {RNA1509_11689, RNA1509_16105, RNA1509_42683, RNA815_2051}
2. MligTC455_50307 1381 28.77 Mlig455_062919, Mlig455_062921

Neo: Int S/G2/M

Age: -

Region-enriched R3: 1.174/0.03835

 1.822 - - 0.865 - - 0.957

Mlig455_062919 {REF} {Length: 1087} {TRANSSPLICED} {RNA1509_22092, RNA1509_32656, RNA1509_50291, RNA1509_9034} {RNA1310_33004.1, RNA1509_22092, RNA1509_32656, RNA1509_50291, RNA1509_9034} {RNA1509_22092, RNA1509_32656, RNA1509_50291, RNA1509_9034, RNA815_22647.1}

Mlig455_062921 {REF} {Length: 1057} {TRANSSPLICED} {RNA1509_19598, RNA1509_52568} {RNA1310_33004.1, RNA1509_19598, RNA1509_52568} {RNA1509_19598, RNA1509_52568, RNA815_22647.1}
3. MligTC455_25839 526 10.96 Mlig455_063298

Neo: -

Age: -

 1.772 0.822 - - - - 0.950 Mlig455_063298 {REF} {Length: 1724} {Pfam: Homeodomain-like domain [PF13384.8, score=21.8]; Winged helix-turn helix [PF13551.8, score=20.9]} {RNA1509_32923, RNA1509_34813, RNA1509_41268} {RNA1310_71250, RNA1509_34813, RNA1509_41268} {RNA1509_34813, RNA1509_41268, RNA815_40067.2}
4. MligTC455_53006 430 8.96 Mlig455_000511

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_000511 {REF} {Length: 951} {TRANSSPLICED} {RNA1509_35561} {RNA1310_67493} {RNA815_18757.2}
5. MligTC455_51040 147 3.06 Mlig455_008235

Neo: -

Age: -

 POLN 0.96 - - - 0.960 - - Mlig455_008235 {REF} {Length: 3176} {TRANSSPLICED} {Pfam: DNA polymerase family A [PF00476.22, score=284.2]} {Human: ENSG00000130997, POLN, DNA polymerase nu, [RH, Score=233, Expect=6e-64]} {Mouse: ENSMUSG00000045102, Poln, DNA polymerase N, [RH, Score=226, Expect=5e-62]} {Dmel: FBgn0002905, mus308, mutagen-sensitive 308, [Score=139, Expect=3e-33]} {Celegans: WBGene00020964, polq-1, DNA polymerase theta, [Score=159, Expect=1e-39]} {Smed: dd_Smed_v6_20320_0_1, dd_Smed_v6_20320_0_1, [Score=155, Expect=2e-39]} {RNA1509_41749} {RNA1310_31032} {RNA815_48580}
6. MligTC455_30064 26 0.55 Mlig455_022944, Mlig455_033985

Neo: -

Age: -

 0.955 - - - 0.955 - -

Mlig455_022944 {REF} {Length: 3518} {Pfam: Integrase zinc binding domain [PF17921.3, score=53.2]; Integrase core domain [PF00665.28, score=49.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=28.6]; H2C2 zinc finger [PF09337.12, score=22.9]; Aspartyl protease [PF13650.8, score=22.9]; DDE superfamily endonuclease [PF13358.8, score=20.1]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=96.7, Expect=5e-21]} {RNA1509_60111} {RNA1310_1717.1} {RNA815_18989}

Mlig455_033985 {REF} {Length: 1734} {Pfam: Integrase zinc binding domain [PF17921.3, score=48.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=29.8]; Aspartyl protease [PF13650.8, score=23.9]} {RNA1509_60111} {RNA1310_1717.1} {RNA815_18989}
7. MligTC455_43828 4914 102.37 Mlig455_056141, Mlig455_056144, Mlig455_058753

Neo: -

Age: -

 0.954 - - - - - 0.954

Mlig455_056141 {REF} {Length: 1691} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=107.8]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=124, Expect=1e-36]} {RNA1509_9428} {RNA1310_13772} {RNA815_6525.1}

Mlig455_056144 {REF} {Length: 1692} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=107.8]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=124, Expect=1e-36]} {RNA1509_27153, RNA1509_9428} {RNA1310_13772, RNA1509_27153} {RNA1509_27153, RNA815_6525.1}

Mlig455_058753 {REF} {Length: 1694} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=107.8]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=124, Expect=1e-36]} {RNA1509_24716, RNA1509_9428} {RNA1310_13772, RNA1509_24716, RNA1509_9428} {RNA1509_24716, RNA1509_9428, RNA815_6525.1}
8. MligTC455_44234 1474 30.7 Mlig455_051464, Mlig455_066694

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.535

 ENDOU 0.952 - - - - - 0.952

Mlig455_051464 {REF} {Length: 3407} {RNA1509_28579} {RNA1310_117397} {RNA815_44731}

Mlig455_066694 {REF} {Length: 5547} {Pfam: Endoribonuclease XendoU [PF09412.12, score=189.9]; Homeodomain-like domain [PF13384.8, score=26.0]; Helix-turn-helix domain [PF13518.8, score=24.1]; Homeodomain-like domain [PF13565.8, score=24.0]; Winged helix-turn helix [PF13551.8, score=20.1]} {Human: ENSG00000111405, ENDOU, endonuclease, poly(U) specific, [Score=129, Expect=5e-34]} {Mouse: ENSMUSG00000022468, Endou, endonuclease, polyU-specific, [Score=129, Expect=3e-33]} {Dmel: FBgn0038381, EndoU, Endoribonuclease U-specific, [Score=96.3, Expect=3e-22]} {Celegans: WBGene00010488, endu-1, Poly(U)-specific endoribonuclease homolog, [Score=99.8, Expect=9e-24]} {Smed: dd_Smed_v6_9580_0_1, dd_Smed_v6_9580_0_1, [Score=165, Expect=1e-48]} {RNA1509_23773} {RNA1310_18442} {RNA815_6308.1}
9. MligTC455_24179 211 4.4 Mlig455_007547

Neo: -

Age: Down-Up-Down

Region-enriched R5: 2.963/0.00045

 0.95 - - - 0.950 - - Mlig455_007547 {REF} {Length: 2180} {Pfam: Tudor domain [PF00567.26, score=44.6]} {Dmel: FBgn0035121, Tudor-SN, Tudor staphylococcal nuclease, [Score=43.9, Expect=7e-06]} {RNA1509_3182} {RNA1310_3717} {RNA815_3377}

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