Data search
Results for MligTC455_25839
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25839 | 526 | 10.96 | Mlig455_063298 | Neo: - Age: - |
Mlig455_063298 {REF} {Length: 1724} {Pfam: Homeodomain-like domain [PF13384.8, score=21.8]; Winged helix-turn helix [PF13551.8, score=20.9]} {RNA1509_32923, RNA1509_34813, RNA1509_41268} {RNA1310_71250, RNA1509_34813, RNA1509_41268} {RNA1509_34813, RNA1509_41268, RNA815_40067.2} |
Cumulative graph for MligTC455_25839
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.255 | 3.9 | 0.29101 | 0.94322 | |
| RegionR2 | 1.773 | 3.9 | 0.00711 | 0.08093 | |
| RegionR3 | 0.796 | 3.9 | 0.10940 | 0.57601 | |
| RegionR4 | -0.681 | 3.9 | 0.25736 | 0.55886 | |
| RegionR5 | -0.313 | 3.9 | 0.50851 | 0.87143 | |
| RegionR6 | -0.288 | 3.9 | 0.58532 | 1.00000 | |
| RegionR7 | -0.416 | 3.9 | 0.52149 | 1.00000 | |
| RegionR8 | 0.384 | 3.9 | 0.59009 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.367 | 3.9 | 0.44510 | 1.00000 | |
| RegenerationR2 | -0.131 | 3.9 | 0.81674 | 0.99442 | |
| RegenerationR3 | 0.438 | 3.9 | 0.48789 | 0.85368 | |
| RegenerationR4 | 0.354 | 3.9 | 0.57177 | 0.90216 | |
| RegenerationR5 | 0.675 | 3.9 | 0.25641 | 0.68880 | |
| RegenerationR6 | 1.275 | 3.9 | 0.04874 | 0.27583 | |
| RegenerationBL | 0.634 | 3.9 | 0.40438 | 0.77341 | |
| RegenerationTP | 0.799 | 3.9 | 0.30197 | 0.74765 |
Genes with expression patterns similar to MligTC455_25839
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25839 | 526 | 10.96 | Mlig455_063298 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_063298 {REF} {Length: 1724} {Pfam: Homeodomain-like domain [PF13384.8, score=21.8]; Winged helix-turn helix [PF13551.8, score=20.9]} {RNA1509_32923, RNA1509_34813, RNA1509_41268} {RNA1310_71250, RNA1509_34813, RNA1509_41268} {RNA1509_34813, RNA1509_41268, RNA815_40067.2} | |
| 2. | MligTC455_36308 | 1628 | 33.92 | Mlig455_007469 | Neo: - Age: - Region-enriched R4: 1.426/0.04698 |
1.802 | - | - | 0.830 | - | - | 0.972 | Mlig455_007469 {REF} {Length: 1351} {TRANSSPLICED} {Pfam: Ubiquinol-cytochrome C reductase complex, 6.4kD protein [PF08997.12, score=42.9]} {Mouse: ENSMUSG00000020163, Uqcr11, ubiquinol-cytochrome c reductase, complex III subunit XI, [Score=39.7, Expect=1e-05]} {Smed: dd_Smed_v6_782_0_1, dd_Smed_v6_782_0_1, [RH, Score=45.4, Expect=2e-08]} {RNA1509_11286} {RNA1310_61690} {RNA815_31570} | |
| 3. | MligTC455_21541 | 505 | 10.52 | Mlig455_031944 | Neo: Int S/G2/M Age: - |
GFM1 | 1.772 | 0.822 | - | - | - | - | 0.950 | Mlig455_031944 {REF} {Length: 3123} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=202.5]; Elongation factor G, domain IV [PF03764.20, score=123.8]; Elongation Factor G, domain III [PF14492.8, score=93.4]; Elongation factor G C-terminus [PF00679.26, score=81.0]; Elongation factor Tu domain 2 [PF03144.27, score=55.2]; Class II release factor RF3, C-terminal domain [PF16658.7, score=29.9]} {Human: ENSG00000168827, GFM1, G elongation factor mitochondrial 1, [RH, Score=898, Expect=0.0]} {Mouse: ENSMUSG00000027774, Gfm1, G elongation factor, mitochondrial 1, [RH, Score=907, Expect=0.0]} {Dmel: FBgn0263133, mEFG1, mitochondrial translation elongation factor G 1, [RH, Score=952, Expect=0.0]} {Celegans: WBGene00009246, gfm-1, Elongation factor G, mitochondrial, [RH, Score=816, Expect=0.0]} {Smed: dd_Smed_v6_1879_0_1, dd_Smed_v6_1879_0_1, [RH, Score=919, Expect=0.0]} {RNA1509_11689, RNA1509_16105, RNA1509_42683} {RNA1310_6805.2, RNA1509_11689, RNA1509_16105, RNA1509_42683} {RNA1509_11689, RNA1509_16105, RNA1509_42683, RNA815_2051} |
| 4. | MligTC455_43764 | 562 | 11.71 | Mlig455_009581 | Neo: - |
ETFDH | 1.689 | 0.734 | - | - | - | - | 0.955 | Mlig455_009581 {REF} {Length: 2120} {Human: ENSG00000171503, ETFDH, electron transfer flavoprotein dehydrogenase, [Score=169, Expect=2e-49]} {Mouse: ENSMUSG00000027809, Etfdh, electron transferring flavoprotein, dehydrogenase, [Score=171, Expect=1e-50]} {Dmel: FBgn0033465, Etf-QO, Electron transfer flavoprotein-ubiquinone oxidoreductase, [Score=150, Expect=8e-43]} {Celegans: WBGene00002855, let-721, Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial, [Score=162, Expect=3e-47]} {Smed: dd_Smed_v6_3785_0_1, dd_Smed_v6_3785_0_1, [Score=184, Expect=9e-56]} {RNA1509_2025} {RNA1310_8787} {RNA815_3614} |
| 5. | MligTC455_35526 | 373 | 7.78 | Mlig455_062972 | Neo: - Age: - |
TMEM9 | 1.675 | 0.722 | - | - | - | - | 0.953 | Mlig455_062972 {REF} {Length: 2298} {TRANSSPLICED} {Pfam: TMEM9 [PF05434.13, score=117.0]} {Human: ENSG00000116857, TMEM9, transmembrane protein 9, [RH, Score=101, Expect=4e-26]} {Mouse: ENSMUSG00000026411, Tmem9, transmembrane protein 9, [RH, Score=107, Expect=1e-28]} {Dmel: FBgn0037313, CG1161, [RH, Score=54.7, Expect=7e-09]} {Smed: dd_Smed_v6_2294_0_1, dd_Smed_v6_2294_0_1, [RH, Score=80.1, Expect=4e-18]} {RNA1509_28083, RNA1509_35035, RNA1509_37283, RNA1509_57355} {RNA1310_15450.1, RNA1509_28083, RNA1509_35035, RNA1509_37283, RNA1509_57355} {RNA1509_28083, RNA1509_35035, RNA1509_37283, RNA1509_57355, RNA815_20516} |
| 6. | MligTC455_34458 | 420 | 8.74 | Mlig455_065800 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-1.953 Region-enriched R4: 3.257/0.00017 |
1.666 | - | - | 0.952 | - | - | 0.714 | Mlig455_065800 {REF} {Length: 685} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23532, RNA1509_38437} {RNA1310_48777, RNA1509_23532, RNA1509_38437} {RNA1509_23532, RNA1509_38437, RNA815_25158} | |
| 7. | MligTC455_43024 | 907 | 18.9 | Mlig455_043735, Mlig455_043739, Mlig455_043829, Mlig455_047419 | Neo: - Age: logFC(26M/2M)=0.232 |
0.961 | - | - | 0.961 | - | - | - | Mlig455_043735 {REF} {Length: 2623} {TRANSSPLICED} {RNA1509_19250} {RNA1310_2879.1} {RNA815_7299} Mlig455_043739 {REF} {Length: 2554} {TRANSSPLICED} {RNA1509_19250} {RNA1310_2879.1} {RNA815_7299} Mlig455_043829 {REF} {Length: 2397} {TRANSSPLICED} {RNA1509_44171} {RNA1310_27247.1} {RNA815_7299} Mlig455_047419 {REF} {Length: 2292} {TRANSSPLICED} {RNA1509_44171} {RNA1310_27247.1} {RNA815_7299} |
|
| 8. | MligTC455_44225 | 1069 | 22.28 | Mlig455_015063 | Neo: - Age: Up-Up-Down |
CORO1B | 0.959 | - | - | - | - | - | 0.959 | Mlig455_015063 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=110.7]; Type of WD40 repeat [PF16300.7, score=70.7]; WD domain, G-beta repeat [PF00400.34, score=24.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=20.7]; Initiation control protein YabA [PF06156.15, score=19.4]} {Human: ENSG00000172725, CORO1B, coronin 1B, [RH, Score=493, Expect=5e-170]; ENSG00000167549, CORO6, coronin 6, [RH, Score=486, Expect=2e-167]; ENSG00000110880, CORO1C, coronin 1C, [RH, Score=474, Expect=5e-163]} {Mouse: ENSMUSG00000024835, Coro1b, coronin, actin binding protein 1B, [RH, Score=493, Expect=2e-170]; ENSMUSG00000097771, Coro1b, coronin, actin binding protein 1B, [RH, Score=493, Expect=2e-170]; ENSMUSG00000020836, Coro6, coronin 6, [RH, Score=480, Expect=2e-165]; ENSMUSG00000004530, Coro1c, coronin, actin binding protein 1C, [RH, Score=473, Expect=2e-162]} {Dmel: FBgn0265935, coro, [RH, Score=481, Expect=2e-165]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [RH, Score=397, Expect=2e-132]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [RH, Score=525, Expect=0.0]} {RNA1509_39223} {RNA1310_30364} {RNA815_20610.1} |
| 9. | MligTC455_44226 | 2103 | 43.81 | Mlig455_015182, Mlig455_027144 | Neo: - Age: Up-Up-Down |
CORO1B | 0.957 | - | - | - | - | - | 0.957 | Mlig455_015182 {REF} {Length: 3501} {Pfam: Initiation control protein YabA [PF06156.15, score=21.1]; Cell division protein ZapB [PF06005.14, score=20.2]} {RNA1509_15548} {RNA1310_30364} {RNA815_20610.1} Mlig455_027144 {REF} {Length: 3431} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=110.7]; Type of WD40 repeat [PF16300.7, score=70.7]; WD domain, G-beta repeat [PF00400.34, score=24.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.4]} {Human: ENSG00000172725, CORO1B, coronin 1B, [RH, Score=492, Expect=7e-170]; ENSG00000167549, CORO6, coronin 6, [RH, Score=485, Expect=2e-167]; ENSG00000110880, CORO1C, coronin 1C, [RH, Score=474, Expect=6e-163]} {Mouse: ENSMUSG00000024835, Coro1b, coronin, actin binding protein 1B, [RH, Score=493, Expect=3e-170]; ENSMUSG00000097771, Coro1b, coronin, actin binding protein 1B, [RH, Score=493, Expect=3e-170]; ENSMUSG00000020836, Coro6, coronin 6, [RH, Score=480, Expect=2e-165]; ENSMUSG00000004530, Coro1c, coronin, actin binding protein 1C, [RH, Score=472, Expect=2e-162]} {Dmel: FBgn0265935, coro, [RH, Score=481, Expect=3e-165]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [RH, Score=396, Expect=6e-132]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [RH, Score=523, Expect=0.0]} {RNA1509_15548} {RNA1310_30364} {RNA815_26523} |
| 10. | MligTC455_51577 | 425 | 8.86 | Mlig455_025284, Mlig455_025312 | Neo: - Age: - |
TRIM71 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_025284 {REF} {Length: 4746} {Pfam: NHL repeat [PF01436.23, score=135.7]; 6-bladed beta-propeller [PF17170.6, score=78.1]; RING-type zinc-finger [PF13445.8, score=36.4]; SMP-30/Gluconolactonase/LRE-like region [PF08450.14, score=34.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=26.1]; Ring finger domain [PF13639.8, score=26.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=25.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.7]; Spt20 family [PF12090.10, score=22.9]; zinc-RING finger domain [PF14634.8, score=20.8]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=206, Expect=3e-55]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=208, Expect=4e-56]} {Dmel: FBgn0265356, tn, thin, [RH, Score=258, Expect=4e-72]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [RH, Score=230, Expect=1e-63]} {Smed: dd_Smed_v6_14782_0_1, dd_Smed_v6_14782_0_1, [RH, Score=220, Expect=9e-66]} {RNA1509_28163} {RNA1310_23625} {RNA815_18338.2} Mlig455_025312 {REF} {Length: 4153} {Pfam: NHL repeat [PF01436.23, score=135.6]; 6-bladed beta-propeller [PF17170.6, score=78.1]; RING-type zinc-finger [PF13445.8, score=36.5]; SMP-30/Gluconolactonase/LRE-like region [PF08450.14, score=34.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=26.1]; Ring finger domain [PF13639.8, score=25.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=25.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.7]; Spt20 family [PF12090.10, score=21.9]; zinc-RING finger domain [PF14634.8, score=20.8]; Nop53 (60S ribosomal biogenesis) [PF07767.13, score=18.5]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=205, Expect=5e-55]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=208, Expect=4e-56]} {Dmel: FBgn0265356, tn, thin, [RH, Score=258, Expect=4e-72]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [RH, Score=229, Expect=1e-63]} {Smed: dd_Smed_v6_14782_0_1, dd_Smed_v6_14782_0_1, [RH, Score=220, Expect=8e-66]} {RNA1509_28163} {RNA1310_23625} {RNA815_18338.2} |
| 11. | MligTC455_53006 | 430 | 8.96 | Mlig455_000511 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_000511 {REF} {Length: 951} {TRANSSPLICED} {RNA1509_35561} {RNA1310_67493} {RNA815_18757.2} |
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