Data search
Results for MligTC455_21572
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21572 | 314 | 6.54 | Mlig455_017661 | Neo: - Age: Up-Down-Up |
DICER1 | Mlig455_017661 {REF} {Length: 8556} {Pfam: RNA dependent RNA polymerase [PF05183.14, score=401.3]; Helicase conserved C-terminal domain [PF00271.33, score=65.0]; DEAD/DEAH box helicase [PF00270.31, score=54.3]; Type III restriction enzyme, res subunit [PF04851.17, score=49.0]} {Human: ENSG00000100697, DICER1, dicer 1, ribonuclease III, [Score=124, Expect=2e-27]} {Mouse: ENSMUSG00000041415, Dicer1, dicer 1, ribonuclease type III, [Score=128, Expect=8e-29]} {Dmel: FBgn0034246, Dcr-2, Dicer-2, [Score=120, Expect=1e-26]} {Celegans: WBGene00004510, rrf-3, RNA-dependent RNA polymerase Family, [RH, Score=212, Expect=9e-55]} {Smed: dd_Smed_v6_5587_0_1, dd_Smed_v6_5587_0_1, [Score=137, Expect=3e-32]} {RNA1509_6090} {RNA1310_444} {RNA815_10889} |
Cumulative graph for MligTC455_21572
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.419 | 3.123 | 0.28736 | 0.93926 | |
| RegionR2 | 0.506 | 3.123 | 0.49070 | 0.87214 | |
| RegionR3 | -0.486 | 3.123 | 0.35894 | 0.89431 | |
| RegionR4 | -0.129 | 3.123 | 0.85749 | 1.00000 | |
| RegionR5 | -1.732 | 3.123 | 0.00082 | 0.00874 | |
| RegionR6 | -0.704 | 3.123 | 0.21049 | 0.78784 | |
| RegionR7 | 0.356 | 3.123 | 0.60776 | 1.00000 | |
| RegionR8 | 0.77 | 3.123 | 0.33842 | 0.97225 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.974 | 3.123 | 0.22849 | 0.95929 | |
| RegenerationR2 | -0.109 | 3.123 | 0.86236 | 1.00000 | |
| RegenerationR3 | 0.644 | 3.123 | 0.35801 | 0.77477 | |
| RegenerationR4 | -0.087 | 3.123 | 0.90409 | 1.00000 | |
| RegenerationR5 | 1.583 | 3.123 | 0.01587 | 0.21870 | |
| RegenerationR6 | 0.021 | 3.123 | 0.97544 | 1.00000 | |
| RegenerationBL | -0.032 | 3.123 | 0.97699 | 1.00000 | |
| RegenerationTP | -0.223 | 3.123 | 0.79102 | 1.00000 |
Genes with expression patterns similar to MligTC455_21572
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21572 | 314 | 6.54 | Mlig455_017661 | Neo: - Age: Up-Down-Up |
DICER1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017661 {REF} {Length: 8556} {Pfam: RNA dependent RNA polymerase [PF05183.14, score=401.3]; Helicase conserved C-terminal domain [PF00271.33, score=65.0]; DEAD/DEAH box helicase [PF00270.31, score=54.3]; Type III restriction enzyme, res subunit [PF04851.17, score=49.0]} {Human: ENSG00000100697, DICER1, dicer 1, ribonuclease III, [Score=124, Expect=2e-27]} {Mouse: ENSMUSG00000041415, Dicer1, dicer 1, ribonuclease type III, [Score=128, Expect=8e-29]} {Dmel: FBgn0034246, Dcr-2, Dicer-2, [Score=120, Expect=1e-26]} {Celegans: WBGene00004510, rrf-3, RNA-dependent RNA polymerase Family, [RH, Score=212, Expect=9e-55]} {Smed: dd_Smed_v6_5587_0_1, dd_Smed_v6_5587_0_1, [Score=137, Expect=3e-32]} {RNA1509_6090} {RNA1310_444} {RNA815_10889} |
| 2. | MligTC455_25165 | 244 | 5.09 | Mlig455_036819 | Neo: - Age: - |
CLIP3 | 1.799 | - | - | - | 0.978 | - | 0.821 | Mlig455_036819 {REF} {Length: 2475} {Pfam: CAP-Gly domain [PF01302.27, score=231.5]; Ankyrin repeats (3 copies) [PF12796.9, score=47.6]; Ankyrin repeat [PF00023.32, score=28.8]; Ankyrin repeats (many copies) [PF13637.8, score=26.1]; Protein of unknown function (DUF2722) [PF10846.10, score=22.1]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.5]} {Human: ENSG00000105270, CLIP3, CAP-Gly domain containing linker protein 3, [RH, Score=226, Expect=6e-66]} {Mouse: ENSMUSG00000013921, Clip3, CAP-GLY domain containing linker protein 3, [RH, Score=222, Expect=8e-65]} {Dmel: FBgn0020503, CLIP-190, Cytoplasmic linker protein 190, [Score=146, Expect=2e-36]} {Celegans: WBGene00009987, tbcb-1, Tubulin-specific chaperone B, [Score=67.0, Expect=2e-12]} {Smed: dd_Smed_v6_6540_0_1, dd_Smed_v6_6540_0_1, [RH, Score=418, Expect=2e-138]} {RNA1509_29697} {RNA1310_15773, RNA1509_29697} {RNA1509_29697, RNA815_18829} |
| 3. | MligTC455_25068 | 735 | 15.3 | Mlig455_003064 | Neo: - |
DDX11 | 1.738 | - | - | - | - | 0.966 | 0.772 | Mlig455_003064 {REF} {Length: 2104} {TRANSSPLICED} {Pfam: Helicase C-terminal domain [PF13307.8, score=176.2]; Ku70/Ku80 beta-barrel domain [PF02735.18, score=161.6]; DEAD_2 [PF06733.17, score=133.8]; Ku70/Ku80 N-terminal alpha/beta domain [PF03731.17, score=87.0]; Ku70/Ku80 C-terminal arm [PF03730.16, score=29.3]} {Human: ENSG00000013573, DDX11, DEAD/H-box helicase 11, [RH, Score=456, Expect=2e-142]} {Mouse: ENSMUSG00000035842, Ddx11, DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11, [Score=474, Expect=9e-149]} {Dmel: FBgn0026876, CG11403, [RH, Score=252, Expect=1e-69]} {Celegans: WBGene00010839, chl-1, ATP-dependent DNA helicase chl-1, [Score=372, Expect=3e-112]} {Smed: dd_Smed_v6_19858_0_2, dd_Smed_v6_19858_0_2, [Score=367, Expect=2e-110]} {RNA1509_4805} {RNA1310_12398.1} {RNA815_4398} |
| 4. | MligTC455_44523 | 760 | 15.84 | Mlig455_053586 | Neo: - Age: - Region-enriched R4: 1.497/0.00569 |
ALDH1L2 | 1.72 | - | - | - | - | 0.963 | 0.757 | Mlig455_053586 {REF} {Length: 3423} {TRANSSPLICED} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=573.5]; Formyl transferase [PF00551.21, score=130.8]; Formyl transferase, C-terminal domain [PF02911.20, score=31.4]; Phosphopantetheine attachment site [PF00550.27, score=25.7]} {Human: ENSG00000136010, ALDH1L2, aldehyde dehydrogenase 1 family member L2, [RH, Score=1147, Expect=0.0]; ENSG00000144908, ALDH1L1, aldehyde dehydrogenase 1 family member L1, [RH, Score=1134, Expect=0.0]} {Mouse: ENSMUSG00000020256, Aldh1l2, aldehyde dehydrogenase 1 family, member L2, [RH, Score=1150, Expect=0.0]; ENSMUSG00000030088, Aldh1l1, aldehyde dehydrogenase 1 family, member L1, [RH, Score=1143, Expect=0.0]} {Dmel: FBgn0032945, CG8665, [RH, Score=1111, Expect=0.0]} {Celegans: WBGene00000109, alh-3, 10-formyltetrahydrofolate dehydrogenase, [RH, Score=1101, Expect=0.0]} {Smed: dd_Smed_v6_5787_0_2, dd_Smed_v6_5787_0_2, [RH, Score=1164, Expect=0.0]} {RNA1509_31296, RNA1509_44405, RNA1509_805} {RNA1310_3167, RNA1509_31296, RNA1509_44405} {RNA1509_31296, RNA1509_44405, RNA815_799.1} |
| 5. | MligTC455_45914 | 359 | 7.49 | Mlig455_025337 | Neo: - Age: logFC(26M/2M)=-0.269 |
TRAF3IP1 | 0.977 | - | - | - | 0.977 | - | - | Mlig455_025337 {REF} {Length: 2762} {TRANSSPLICED} {Pfam: Microtubule-binding protein MIP-T3 C-terminal region [PF17749.3, score=131.6]; Microtubule-binding protein MIP-T3 CH-like domain [PF10243.11, score=42.6]; Takusan [PF04822.15, score=19.2]} {Human: ENSG00000204104, TRAF3IP1, TRAF3 interacting protein 1, [Score=198, Expect=2e-55]} {Mouse: ENSMUSG00000034292, Traf3ip1, TRAF3 interacting protein 1, [RH, Score=189, Expect=2e-52]} {Dmel: FBgn0086707, ncm, nucampholin, [Score=48.9, Expect=1e-05]} {Celegans: WBGene00001127, dyf-11, [Score=67.4, Expect=1e-11]} {Smed: dd_Smed_v6_10562_0_1, dd_Smed_v6_10562_0_1, [Score=168, Expect=1e-45]} {RNA1509_5107} {RNA1310_14186.2} {RNA815_2859} |
| 6. | MligTC455_24911 | 650 | 13.55 | Mlig455_019313 | Neo: - Age: Up-Down-Up |
ELP1 | 0.97 | - | - | - | - | - | 0.970 | Mlig455_019313 {REF} {Length: 5338} {TRANSSPLICED} {Pfam: IKI3 family [PF04762.14, score=397.1]} {Human: ENSG00000070061, ELP1, elongator complex protein 1, [Score=259, Expect=1e-71]} {Mouse: ENSMUSG00000028431, Elp1, elongator complex protein 1, [Score=193, Expect=3e-50]} {Dmel: FBgn0037926, Elp1, Elongator complex protein 1, [Score=154, Expect=4e-38]} {Celegans: WBGene00022463, elpc-1, Elongator complex protein 1, [Score=73.6, Expect=5e-13]} {Smed: dd_Smed_v6_10377_0_1, dd_Smed_v6_10377_0_1, [Score=130, Expect=7e-31]} {RNA1509_11425} {RNA1310_1576.2} {RNA815_614} |
| 7. | MligTC455_31639 | 929 | 19.35 | Mlig455_010618 | Neo: - Age: Down-Up-Down |
0.963 | - | - | - | - | 0.963 | - | Mlig455_010618 {REF} {Length: 905} {NoTransDecoderORF} {RNA1509_13302, RNA1509_42182} {RNA1310_51095, RNA1509_13302} {RNA1509_13302, RNA815_22817} | |
| 8. | MligTC455_32054 | 384 | 8.01 | Mlig455_015060 | Neo: - Age: - |
C12orf66 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_015060 {REF} {Length: 1960} {TRANSSPLICED} {Pfam: KICSTOR complex C12orf66 like [PF09404.12, score=205.9]} {Human: ENSG00000174206, C12orf66, chromosome 12 open reading frame 66, [RH, Score=153, Expect=6e-41]} {Mouse: ENSMUSG00000053684, BC048403, cDNA sequence BC048403, [RH, Score=153, Expect=6e-41]} {Smed: dd_Smed_v6_6268_0_1, dd_Smed_v6_6268_0_1, [RH, Score=62.0, Expect=3e-10]} {RNA1509_56753} {RNA1310_18670.1} {RNA815_8138} |
| 9. | MligTC455_40755 | 12 | 0.26 | Mlig455_054719 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_054719 {REF} {Length: 2898} {RNA1509_38191} {RNA1310_5321.1, RNA1509_38191} {RNA1509_38191, RNA815_12734} | |
| 10. | MligTC455_45670 | 1130 | 23.53 | Mlig455_020255 | Neo: Int S/G2/M Age: - |
PITRM1 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_020255 {REF} {Length: 3336} {TRANSSPLICED} {Pfam: Peptidase M16C associated [PF08367.13, score=163.4]; Peptidase M16 inactive domain [PF05193.23, score=64.2]; Insulinase (Peptidase family M16) [PF00675.22, score=27.8]} {Human: ENSG00000107959, PITRM1, pitrilysin metallopeptidase 1, [RH, Score=637, Expect=0.0]} {Mouse: ENSMUSG00000021193, Pitrm1, pitrilysin metallepetidase 1, [RH, Score=655, Expect=0.0]} {Dmel: FBgn0033005, CG3107, [RH, Score=579, Expect=0.0]} {Celegans: WBGene00015481, C05D11.1, [RH, Score=73.6, Expect=5e-13]} {Smed: dd_Smed_v6_5873_0_1, dd_Smed_v6_5873_0_1, [RH, Score=653, Expect=0.0]} {RNA1509_5076} {RNA1310_3817, RNA1509_5076} {RNA1509_5076, RNA815_27149} |
| 11. | MligTC455_46411 | 1598 | 33.3 | Mlig455_031090, Mlig455_031125 | Neo: Int S/G2/M Age: - |
RFC1 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_031090 {REF} {Length: 3760} {TRANSSPLICED} {Pfam: Replication factor RFC1 C terminal domain [PF08519.14, score=147.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=47.3]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=34.2]; twin BRCT domain [PF12738.9, score=20.1]} {Human: ENSG00000035928, RFC1, replication factor C subunit 1, [Score=545, Expect=2e-174]} {Mouse: ENSMUSG00000029191, Rfc1, replication factor C (activator 1) 1, [Score=551, Expect=9e-177]} {Dmel: FBgn0004913, Gnf1, Germ line transcription factor 1, [Score=518, Expect=4e-166]} {Celegans: WBGene00004337, rfc-1, RFC (DNA replication factor) family, [RH, Score=440, Expect=2e-138]} {Smed: dd_Smed_v6_11546_0_1, dd_Smed_v6_11546_0_1, [Score=395, Expect=8e-121]} {RNA1509_32943} {RNA1310_3700} {RNA815_3470} Mlig455_031125 {REF} {Length: 3479} {TRANSSPLICED} {Pfam: Replication factor RFC1 C terminal domain [PF08519.14, score=148.5]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=47.5]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=34.4]; twin BRCT domain [PF12738.9, score=20.3]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=18.4]} {Human: ENSG00000035928, RFC1, replication factor C subunit 1, [RH, Score=607, Expect=0.0]} {Mouse: ENSMUSG00000029191, Rfc1, replication factor C (activator 1) 1, [RH, Score=620, Expect=0.0]} {Dmel: FBgn0004913, Gnf1, Germ line transcription factor 1, [Score=558, Expect=0.0]} {Celegans: WBGene00004337, rfc-1, RFC (DNA replication factor) family, [RH, Score=437, Expect=4e-138]} {Smed: dd_Smed_v6_11546_0_1, dd_Smed_v6_11546_0_1, [RH, Score=454, Expect=1e-143]} {RNA1509_22129} {RNA1310_3700} {RNA815_3470} |
| 12. | MligTC455_46493 | 1550 | 32.28 | Mlig455_061678 | Neo: - Age: logFC(26M/2M)=0.238 |
CEBPZ | 0.956 | - | - | - | - | 0.956 | - | Mlig455_061678 {REF} {Length: 2773} {TRANSSPLICED} {Pfam: CBF/Mak21 family [PF03914.19, score=125.1]} {Human: ENSG00000115816, CEBPZ, CCAAT enhancer binding protein zeta, [RH, Score=359, Expect=8e-109]} {Mouse: ENSMUSG00000024081, Cebpz, CCAAT/enhancer binding protein zeta, [RH, Score=347, Expect=2e-104]} {Dmel: FBgn0036124, CG7839, [RH, Score=223, Expect=3e-60]} {Celegans: WBGene00009084, F23B12.7, [RH, Score=219, Expect=8e-60]} {Smed: dd_Smed_v6_5545_0_1, dd_Smed_v6_5545_0_1, [RH, Score=244, Expect=8e-69]} {RNA1509_6570} {RNA1310_6821.1, RNA1509_6570} {RNA1509_6570, RNA815_20498} |
| 13. | MligTC455_53728 | 415 | 8.64 | Mlig455_034537, Mlig455_034579 | Neo: Germline Age: Down-Up-Down |
0.953 | - | - | - | - | - | 0.953 | Mlig455_034537 {REF} {Length: 2516} {TRANSSPLICED} {RNA1509_25590} {RNA1310_8040} {RNA815_24283} Mlig455_034579 {REF} {Length: 3001} {TRANSSPLICED} {RNA1509_25590, RNA1509_4650} {RNA1310_8040, RNA1509_25590, RNA1509_4650} {RNA1509_25590, RNA1509_4650, RNA815_24283} |
|
| 14. | MligTC455_28192 | 612 | 12.76 | Mlig455_032616, Mlig455_060467, Mlig455_060474 | Neo: - Age: - |
PIF1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_032616 {REF} {Length: 2558} {TRANSSPLICED} {RNA1509_51272} {RNA1310_363} {RNA815_104.1} Mlig455_060467 {REF} {Length: 508} {Pfam: PIF1-like helicase [PF05970.16, score=120.8]; Helitron helicase-like domain at N-terminus [PF14214.8, score=94.4]; AAA domain [PF13604.8, score=54.2]; AAA domain [PF13245.8, score=28.8]; Helicase [PF02689.16, score=24.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=23.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=130, Expect=3e-30]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=134, Expect=1e-31]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=130, Expect=2e-30]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=132, Expect=1e-31]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=128, Expect=8e-30]} {RNA1509_51272} {RNA1310_363} {RNA815_104.1} Mlig455_060474 {REF} {Length: 1944} {TRANSSPLICED} {RNA1509_51272} {RNA1310_363} {RNA815_104.1} |
| 15. | MligTC455_51506 | 1346 | 28.05 | Mlig455_020731, Mlig455_020802 | Neo: Int S/G2/M Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_020731 {REF} {Length: 2629} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=26.3]; WD domain, G-beta repeat [PF00400.34, score=23.5]} {Smed: dd_Smed_v6_12553_0_1, dd_Smed_v6_12553_0_1, [RH, Score=127, Expect=1e-32]} {RNA1509_15677, RNA1509_53184} {RNA1310_14716, RNA1509_15677, RNA1509_53184} {RNA1509_15677, RNA1509_53184, RNA815_16160} Mlig455_020802 {REF} {Length: 1759} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=26.6]; WD domain, G-beta repeat [PF00400.34, score=23.4]} {Smed: dd_Smed_v6_12553_0_1, dd_Smed_v6_12553_0_1, [RH, Score=129, Expect=1e-33]} {RNA1509_15677} {RNA1310_14716} {RNA815_16160} |
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