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Results for MligTC455_24911

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_24911 650 13.55 Mlig455_019313

Neo: -

Age: Up-Down-Up

 ELP1 Mlig455_019313 {REF} {Length: 5338} {TRANSSPLICED} {Pfam: IKI3 family [PF04762.14, score=397.1]} {Human: ENSG00000070061, ELP1, elongator complex protein 1, [Score=259, Expect=1e-71]} {Mouse: ENSMUSG00000028431, Elp1, elongator complex protein 1, [Score=193, Expect=3e-50]} {Dmel: FBgn0037926, Elp1, Elongator complex protein 1, [Score=154, Expect=4e-38]} {Celegans: WBGene00022463, elpc-1, Elongator complex protein 1, [Score=73.6, Expect=5e-13]} {Smed: dd_Smed_v6_10377_0_1, dd_Smed_v6_10377_0_1, [Score=130, Expect=7e-31]} {RNA1509_11425} {RNA1310_1576.2} {RNA815_614}

Cumulative graph for MligTC455_24911

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.092 4.106 0.94354 1.00000
RegionR2 0.196 4.106 0.70592 1.00000
RegionR3 0.002 4.106 0.99470 1.00000
RegionR4 -0.163 4.106 0.74452 1.00000
RegionR5 0.6 4.106 0.08181 0.26624
RegionR6 0.022 4.106 0.95672 1.00000
RegionR7 -0.479 4.106 0.46171 1.00000
RegionR8 -0.085 4.106 0.91592 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.212 4.106 0.40362 1.00000
RegenerationR2 0.141 4.106 0.72203 0.96308
RegenerationR3 0.398 4.106 0.37005 0.78395
RegenerationR4 0.193 4.106 0.67022 0.94263
RegenerationR5 0.003 4.106 0.99892 1.00000
RegenerationR6 0.332 4.106 0.44541 0.76762
RegenerationBL 0.971 4.106 0.07672 0.32334
RegenerationTP 0.974 4.106 0.12109 0.53027


Genes with expression patterns similar to MligTC455_24911

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_24911 650 13.55 Mlig455_019313

Neo: -

Age: Up-Down-Up

 ELP1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_019313 {REF} {Length: 5338} {TRANSSPLICED} {Pfam: IKI3 family [PF04762.14, score=397.1]} {Human: ENSG00000070061, ELP1, elongator complex protein 1, [Score=259, Expect=1e-71]} {Mouse: ENSMUSG00000028431, Elp1, elongator complex protein 1, [Score=193, Expect=3e-50]} {Dmel: FBgn0037926, Elp1, Elongator complex protein 1, [Score=154, Expect=4e-38]} {Celegans: WBGene00022463, elpc-1, Elongator complex protein 1, [Score=73.6, Expect=5e-13]} {Smed: dd_Smed_v6_10377_0_1, dd_Smed_v6_10377_0_1, [Score=130, Expect=7e-31]} {RNA1509_11425} {RNA1310_1576.2} {RNA815_614}
2. MligTC455_21572 314 6.54 Mlig455_017661

Neo: -

Age: Up-Down-Up

 DICER1 0.97 - - - - - 0.970 Mlig455_017661 {REF} {Length: 8556} {Pfam: RNA dependent RNA polymerase [PF05183.14, score=401.3]; Helicase conserved C-terminal domain [PF00271.33, score=65.0]; DEAD/DEAH box helicase [PF00270.31, score=54.3]; Type III restriction enzyme, res subunit [PF04851.17, score=49.0]} {Human: ENSG00000100697, DICER1, dicer 1, ribonuclease III, [Score=124, Expect=2e-27]} {Mouse: ENSMUSG00000041415, Dicer1, dicer 1, ribonuclease type III, [Score=128, Expect=8e-29]} {Dmel: FBgn0034246, Dcr-2, Dicer-2, [Score=120, Expect=1e-26]} {Celegans: WBGene00004510, rrf-3, RNA-dependent RNA polymerase Family, [RH, Score=212, Expect=9e-55]} {Smed: dd_Smed_v6_5587_0_1, dd_Smed_v6_5587_0_1, [Score=137, Expect=3e-32]} {RNA1509_6090} {RNA1310_444} {RNA815_10889}
3. MligTC455_27029 560 11.67 Mlig455_007012, Mlig455_028617

Neo: -

Age: -

Region-enriched R4: 1.111/0.04532

 0.966 - - - - - 0.966

Mlig455_007012 {REF} {Length: 347} {RNA1509_25982} {RNA1310_586.1} {RNA815_52501}

Mlig455_028617 {REF} {Length: 5161} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=126.2]; Endonuclease-reverse transcriptase [PF14529.8, score=76.5]} {RNA1509_32599} {RNA1310_1659} {RNA815_252.2}
4. MligTC455_44382 1370 28.54 Mlig455_012334

Neo: -

Age: Down-Up-Up

 EIF2D 0.965 - - - 0.965 - - Mlig455_012334 {REF} {Length: 1896} {TRANSSPLICED} {Pfam: Pre-PUA-like domain [PF17832.3, score=47.5]} {Human: ENSG00000143486, EIF2D, eukaryotic translation initiation factor 2D, [Score=110, Expect=8e-27]} {Mouse: ENSMUSG00000026427, Eif2d, eukaryotic translation initiation factor 2D, [Score=106, Expect=1e-25]} {Celegans: WBGene00016113, eif-2D, Eukaryotic Initiation Factor, [Score=60.8, Expect=3e-10]} {Smed: dd_Smed_v6_8416_0_1, dd_Smed_v6_8416_0_1, [Score=76.6, Expect=1e-15]} {RNA1509_11904, RNA1509_21305, RNA1509_42762} {RNA1310_15383.1, RNA1509_11904, RNA1509_21305, RNA1509_42762} {RNA1509_11904, RNA1509_21305, RNA1509_42762, RNA815_5804}
5. MligTC455_23121 4355 90.73 Mlig455_004752

Neo: Int S/G2/M

Age: -

 RPL24 0.96 - - - 0.960 - - Mlig455_004752 {REF} {Length: 661} {TRANSSPLICED} {Pfam: Ribosomal protein L24e [PF01246.22, score=100.3]} {Human: ENSG00000114391, RPL24, ribosomal protein L24, [RH, Score=174, Expect=3e-56]} {Mouse: ENSMUSG00000098274, Rpl24, ribosomal protein L24, [RH, Score=174, Expect=2e-56]} {Dmel: FBgn0032518, RpL24, Ribosomal protein L24, [RH, Score=172, Expect=1e-55]} {Celegans: WBGene00004436, rpl-24.1, 60S ribosomal protein L24, [RH, Score=128, Expect=2e-38]} {Smed: dd_Smed_v6_172_0_1, dd_Smed_v6_172_0_1, [RH, Score=145, Expect=3e-45]} {RNA1509_21369} {RNA1310_52946.1} {RNA815_28188}
6. MligTC455_30462 1060 22.08 Mlig455_067676

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.546

 0.958 - - - 0.958 - - Mlig455_067676 {REF} {Length: 1864} {Pfam: Carnitine deficiency-associated protein 3 [PF15359.8, score=21.3]} {Smed: dd_Smed_v6_2628_0_1, dd_Smed_v6_2628_0_1, [Score=48.1, Expect=2e-06]} {RNA1509_58679} {RNA1310_22666.1} {RNA815_22268}
7. MligTC455_32273 1328 27.66 Mlig455_050297

Neo: -

Age: Up-Down-Down

 SMG1 0.957 - - 0.957 - - - Mlig455_050297 {REF} {Length: 13410} {TRANSSPLICED} {Pfam: Serine/threonine-protein kinase smg-1 [PF15785.7, score=237.0]; Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=155.2]; Ankyrin repeats (3 copies) [PF12796.9, score=75.2]; FATC domain [PF02260.22, score=51.8]; Ankyrin repeats (many copies) [PF13637.8, score=39.9]; Ankyrin repeat [PF00023.32, score=35.4]; Ankyrin repeat [PF13606.8, score=29.5]; Ankyrin repeats (many copies) [PF13857.8, score=27.9]} {Human: ENSG00000157106, SMG1, SMG1, nonsense mediated mRNA decay associated PI3K related kinase, [Score=972, Expect=0.0]} {Mouse: ENSMUSG00000030655, Smg1, SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans), [Score=875, Expect=0.0]} {Dmel: FBgn0263968, nonC, no-on-and-no-off transient C, [RH, Score=514, Expect=1e-145]} {Celegans: WBGene00004879, smg-1, Serine/threonine-protein kinase smg-1, [RH, Score=417, Expect=7e-117]} {Smed: dd_Smed_v6_4600_0_1, dd_Smed_v6_4600_0_1, [RH, Score=524, Expect=4e-150]} {RNA1509_24067, RNA1509_46863, RNA1509_5034, RNA1509_7041} {RNA1310_265.1, RNA1509_24067, RNA1509_46863, RNA1509_5034, RNA1509_7041} {RNA1509_24067, RNA1509_46863, RNA1509_5034, RNA1509_7041, RNA815_208}
8. MligTC455_53728 415 8.64 Mlig455_034537, Mlig455_034579

Neo: Germline

Age: Down-Up-Down

 0.957 - - - - - 0.957

Mlig455_034537 {REF} {Length: 2516} {TRANSSPLICED} {RNA1509_25590} {RNA1310_8040} {RNA815_24283}

Mlig455_034579 {REF} {Length: 3001} {TRANSSPLICED} {RNA1509_25590, RNA1509_4650} {RNA1310_8040, RNA1509_25590, RNA1509_4650} {RNA1509_25590, RNA1509_4650, RNA815_24283}
9. MligTC455_43093 620 12.92 Mlig455_007000

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_007000 {REF} {Length: 1343} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=36.0]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=20.2]} {RNA1509_29676} {RNA1310_23932, RNA1509_29676} {RNA1509_29676, RNA815_10768.1}

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