Data search


search
Exact
Search

Results for MligTC455_21591

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21591 432 9.01 Mlig455_020261

Neo: -

Age: -

Mlig455_020261 {REF} {Length: 3956} {Pfam: CASC3/Barentsz eIF4AIII binding [PF09405.12, score=54.6]} {Dmel: FBgn0045862, btz, barentsz, [RH, Score=57.0, Expect=6e-08]} {Celegans: WBGene00012343, W08E3.2, [RH, Score=79.0, Expect=5e-15]} {Smed: dd_Smed_v6_10198_0_1, dd_Smed_v6_10198_0_1, [RH, Score=68.6, Expect=9e-12]} {RNA1509_10198} {RNA1310_6243.2} {RNA815_4146}

Cumulative graph for MligTC455_21591

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.865 3.723 0.57337 1.00000
RegionR2 1.639 3.723 0.00595 0.07196
RegionR3 0.179 3.723 0.71105 1.00000
RegionR4 -0.03 3.723 0.97367 1.00000
RegionR5 -0.003 3.723 0.99748 1.00000
RegionR6 0.101 3.723 0.83624 1.00000
RegionR7 0.791 3.723 0.21669 0.83448
RegionR8 -1.813 3.723 0.13801 0.67912

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.854 3.723 0.39495 1.00000
RegenerationR2 0.267 3.723 0.51276 0.87689
RegenerationR3 1.194 3.723 0.01896 0.25238
RegenerationR4 0.901 3.723 0.08020 0.44894
RegenerationR5 0.628 3.723 0.16690 0.59340
RegenerationR6 0.839 3.723 0.10287 0.39734
RegenerationBL 1.149 3.723 0.12092 0.41261
RegenerationTP 1.134 3.723 0.19132 0.63007


Genes with expression patterns similar to MligTC455_21591

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21591 432 9.01 Mlig455_020261

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_020261 {REF} {Length: 3956} {Pfam: CASC3/Barentsz eIF4AIII binding [PF09405.12, score=54.6]} {Dmel: FBgn0045862, btz, barentsz, [RH, Score=57.0, Expect=6e-08]} {Celegans: WBGene00012343, W08E3.2, [RH, Score=79.0, Expect=5e-15]} {Smed: dd_Smed_v6_10198_0_1, dd_Smed_v6_10198_0_1, [RH, Score=68.6, Expect=9e-12]} {RNA1509_10198} {RNA1310_6243.2} {RNA815_4146}
2. MligTC455_21592 803 16.74 Mlig455_022501

Neo: Int S/G2/M

Age: Up-Down-Up

4.521 0.974 0.923 - 0.812 0.932 0.880 Mlig455_022501 {REF} {Length: 3861} {Pfam: CASC3/Barentsz eIF4AIII binding [PF09405.12, score=56.7]} {Dmel: FBgn0033661, CG13185, [Score=60.1, Expect=1e-08]} {Celegans: WBGene00012343, W08E3.2, [RH, Score=77.8, Expect=2e-14]} {Smed: dd_Smed_v6_10198_0_1, dd_Smed_v6_10198_0_1, [RH, Score=65.5, Expect=1e-10]} {RNA1509_10198} {RNA1310_6243.1, RNA1509_10198} {RNA1509_10198, RNA815_4146}
3. MligTC455_19705 2157 44.94 Mlig455_018234, Mlig455_018244

Neo: -

Age: -

Region-enriched R5: 1.158/0.00021

ETNK1 1.707 - - - 0.754 0.953 -

Mlig455_018234 {REF} {Length: 2420} {TRANSSPLICED} {Pfam: Choline/ethanolamine kinase [PF01633.22, score=158.2]; Phosphotransferase enzyme family [PF01636.25, score=42.6]} {Human: ENSG00000139163, ETNK1, ethanolamine kinase 1, [RH, Score=293, Expect=2e-95]} {Mouse: ENSMUSG00000030275, Etnk1, ethanolamine kinase 1, [RH, Score=290, Expect=6e-96]; ENSMUSG00000070644, Etnk2, ethanolamine kinase 2, [RH, Score=282, Expect=2e-92]} {Dmel: FBgn0000536, eas, easily shocked, [RH, Score=273, Expect=1e-87]} {Celegans: WBGene00000515, ckc-1, Choline Kinase C, [RH, Score=210, Expect=4e-65]} {Smed: dd_Smed_v6_10949_0_1, dd_Smed_v6_10949_0_1, [RH, Score=255, Expect=9e-83]} {RNA1509_15602, RNA1509_26179, RNA1509_30660, RNA1509_37975, RNA1509_56920} {RNA1310_14674, RNA1509_15602, RNA1509_26179, RNA1509_30660, RNA1509_37975, RNA1509_56920} {RNA1509_15602, RNA1509_26179, RNA1509_30660, RNA1509_37975, RNA1509_56920, RNA815_6221.1}

Mlig455_018244 {REF} {Length: 2137} {TRANSSPLICED} {Pfam: Choline/ethanolamine kinase [PF01633.22, score=155.8]; Phosphotransferase enzyme family [PF01636.25, score=39.7]} {Human: ENSG00000139163, ETNK1, ethanolamine kinase 1, [RH, Score=289, Expect=6e-94]} {Mouse: ENSMUSG00000030275, Etnk1, ethanolamine kinase 1, [RH, Score=290, Expect=8e-96]; ENSMUSG00000070644, Etnk2, ethanolamine kinase 2, [RH, Score=280, Expect=2e-91]} {Dmel: FBgn0000536, eas, easily shocked, [RH, Score=270, Expect=2e-86]} {Celegans: WBGene00000515, ckc-1, Choline Kinase C, [RH, Score=207, Expect=5e-64]} {Smed: dd_Smed_v6_10949_0_1, dd_Smed_v6_10949_0_1, [RH, Score=252, Expect=2e-81]} {RNA1509_37975} {RNA1310_14674} {RNA815_6221.1}
4. MligTC455_29287 675 14.06 Mlig455_049797

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.343

RRBP1 0.952 - - - - 0.952 - Mlig455_049797 {REF} {Length: 4084} {TRANSSPLICED} {Human: ENSG00000125844, RRBP1, ribosome binding protein 1, [Score=57.8, Expect=1e-07]; ENSG00000126777, KTN1, kinectin 1, [Score=56.2, Expect=3e-07]} {Mouse: ENSMUSG00000027422, Rrbp1, ribosome binding protein 1, [Score=60.1, Expect=1e-08]} {Smed: dd_Smed_v6_1111_0_1, dd_Smed_v6_1111_0_1, [RH, Score=103, Expect=1e-22]} {RNA1509_11298} {RNA1310_4678} {RNA815_2519}
5. MligTC455_46934 653 13.6 Mlig455_059210

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_059210 {REF} {Length: 1225} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4735) [PF15882.7, score=126.9]} {Smed: dd_Smed_v6_13989_0_1, dd_Smed_v6_13989_0_1, [Score=97.1, Expect=4e-22]} {RNA1509_29459} {RNA1310_17824.1} {RNA815_13935.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA