TomoSeq data search

Data search

Results for MligTC455_29287

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29287

675

14.06

Mlig455_049797

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.343

RRBP1

Mlig455_049797 {REF} {Length: 4084} {TRANSSPLICED} {Human: ENSG00000125844, RRBP1, ribosome binding protein 1, [Score=57.8, Expect=1e-07]; ENSG00000126777, KTN1, kinectin 1, [Score=56.2, Expect=3e-07]} {Mouse: ENSMUSG00000027422, Rrbp1, ribosome binding protein 1, [Score=60.1, Expect=1e-08]} {Smed: dd_Smed_v6_1111_0_1, dd_Smed_v6_1111_0_1, [RH, Score=103, Expect=1e-22]} {RNA1509_11298} {RNA1310_4678} {RNA815_2519}

Cumulative graph for MligTC455_29287

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.285	4.105	0.28525	0.93659
RegionR2	0.463	4.105	0.35360	0.74758
RegionR3	-0.234	4.105	0.57232	1.00000
RegionR4	-0.134	4.105	0.76814	1.00000
RegionR5	0.057	4.105	0.87346	1.00000
RegionR6	-0.069	4.105	0.86973	1.00000
RegionR7	1.203	4.105	0.00620	0.12699
RegionR8	-0.002	4.105	0.99923	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.085	4.105	0.96631	1.00000
RegenerationR2	1.065	4.105	0.00596	0.12377
RegenerationR3	1.752	4.105	0.00011	0.01212
RegenerationR4	0.971	4.105	0.02715	0.26432
RegenerationR5	0.708	4.105	0.08088	0.44205
RegenerationR6	0.837	4.105	0.07466	0.34153
RegenerationBL	0.745	4.105	0.15056	0.46358
RegenerationTP	0.621	4.105	0.25180	0.69937

Genes with expression patterns similar to MligTC455_29287

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29287	675	14.06	Mlig455_049797	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.343	RRBP1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_049797 {REF} {Length: 4084} {TRANSSPLICED} {Human: ENSG00000125844, RRBP1, ribosome binding protein 1, [Score=57.8, Expect=1e-07]; ENSG00000126777, KTN1, kinectin 1, [Score=56.2, Expect=3e-07]} {Mouse: ENSMUSG00000027422, Rrbp1, ribosome binding protein 1, [Score=60.1, Expect=1e-08]} {Smed: dd_Smed_v6_1111_0_1, dd_Smed_v6_1111_0_1, [RH, Score=103, Expect=1e-22]} {RNA1509_11298} {RNA1310_4678} {RNA815_2519}
2.	MligTC455_15746	225	4.69	Mlig455_034388	Neo: - Age: -		1.779	-	-	0.955	-	0.824	-	Mlig455_034388 {REF} {Length: 1431} {RNA1509_833} {RNA1310_24352} {RNA815_5711}
3.	MligTC455_52544	250	5.21	Mlig455_030562	Neo: - Age: Up-Down-Down Region-enriched R8: 3.544/0.00108		1.765	-	-	0.962	0.803	-	-	Mlig455_030562 {REF} {Length: 1251} {RNA1310_32103} {RNA815_22028}
4.	MligTC455_18664	91	1.89	Mlig455_053403	Neo: - Age: -	TMX3	0.955	-	-	0.955	-	-	-	Mlig455_053403 {REF} {Length: 2667} {TRANSSPLICED} {Human: ENSG00000166479, TMX3, thioredoxin related transmembrane protein 3, [Score=91.7, Expect=3e-19]} {Mouse: ENSMUSG00000024614, Tmx3, thioredoxin-related transmembrane protein 3, [Score=96.3, Expect=7e-21]} {Dmel: FBgn0036579, CG5027, [Score=106, Expect=2e-24]} {Celegans: WBGene00022836, ZK973.11, [Score=104, Expect=4e-24]} {Smed: dd_Smed_v6_10003_0_1, dd_Smed_v6_10003_0_1, [Score=144, Expect=1e-37]} {RNA1310_125165}
5.	MligTC455_38516	1028	21.42	Mlig455_045468	Neo: - Age: Down-Up-Up		0.955	-	-	-	-	0.955	-	Mlig455_045468 {REF} {Length: 2340} {TRANSSPLICED} {Pfam: PEHE domain [PF15275.8, score=45.4]} {RNA1509_13028, RNA1509_45123, RNA1509_59257} {RNA1310_9987.1, RNA1509_45123, RNA1509_59257} {RNA1509_45123, RNA1509_59257, RNA815_3493}
6.	MligTC455_33004	291	6.07	Mlig455_035954, Mlig455_058423	Neo: - Age: Down-Up-Up Region-enriched R8: 3.765/0.00001 Region-enriched R7: 2.479/0.03424	LRP12	0.954	-	-	0.954	-	-	-	Mlig455_035954 {REF} {Length: 2125} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=37.1]} {Human: ENSG00000147650, LRP12, LDL receptor related protein 12, [Score=49.3, Expect=3e-06]; ENSG00000171208, NETO2, neuropilin and tolloid like 2, [Score=47.4, Expect=1e-05]} {Mouse: ENSMUSG00000022305, Lrp12, low density lipoprotein-related protein 12, [Score=49.7, Expect=2e-06]} {RNA1509_18736} {RNA1310_23783.1} {RNA815_18491} Mlig455_058423 {REF} {Length: 1426} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=37.1]} {Human: ENSG00000147650, LRP12, LDL receptor related protein 12, [Score=49.3, Expect=3e-06]; ENSG00000171208, NETO2, neuropilin and tolloid like 2, [Score=48.5, Expect=6e-06]} {Mouse: ENSMUSG00000022305, Lrp12, low density lipoprotein-related protein 12, [Score=49.7, Expect=2e-06]; ENSMUSG00000036902, Neto2, neuropilin (NRP) and tolloid (TLL)-like 2, [Score=48.5, Expect=4e-06]} {RNA1310_23783.1} {RNA815_18491}
7.	MligTC455_40223	172	3.59	Mlig455_016264	Neo: - Age: - Region-enriched R8: 3.704/0.01076	CHRNA10	0.953	-	-	0.953	-	-	-	Mlig455_016264 {REF} {Length: 4782} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=169.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=109.0]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=230, Expect=2e-68]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=225, Expect=1e-66]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=233, Expect=9e-70]} {Dmel: FBgn0032151, nAChRalpha6, nicotinic Acetylcholine Receptor alpha6, [Score=236, Expect=2e-70]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [Score=215, Expect=6e-63]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=280, Expect=9e-87]} {RNA1509_35668} {RNA1310_11720.1} {RNA815_6827}
8.	MligTC455_21591	432	9.01	Mlig455_020261	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_020261 {REF} {Length: 3956} {Pfam: CASC3/Barentsz eIF4AIII binding [PF09405.12, score=54.6]} {Dmel: FBgn0045862, btz, barentsz, [RH, Score=57.0, Expect=6e-08]} {Celegans: WBGene00012343, W08E3.2, [RH, Score=79.0, Expect=5e-15]} {Smed: dd_Smed_v6_10198_0_1, dd_Smed_v6_10198_0_1, [RH, Score=68.6, Expect=9e-12]} {RNA1509_10198} {RNA1310_6243.2} {RNA815_4146}
9.	MligTC455_52721	546	11.37	Mlig455_043346	Neo: Int S/G2/M Age: -	API5	0.952	-	-	0.952	-	-	-	Mlig455_043346 {REF} {Length: 2749} {Pfam: Apoptosis inhibitory protein 5 (API5) [PF05918.13, score=309.2]; HEAT repeats [PF13646.8, score=22.4]} {Human: ENSG00000166181, API5, apoptosis inhibitor 5, [Score=250, Expect=2e-75]} {Mouse: ENSMUSG00000027193, Api5, apoptosis inhibitor 5, [Score=249, Expect=4e-75]} {Dmel: FBgn0027885, Aac11, [Score=192, Expect=6e-54]} {Smed: dd_Smed_v6_2384_0_1, dd_Smed_v6_2384_0_1, [RH, Score=140, Expect=8e-36]} {RNA1509_59316} {RNA1310_7983} {RNA815_2911.1}

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