M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_21650

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21650 667 13.89 Mlig455_021494

Neo: -

Age: Up-Down-Down

 RNF213 Mlig455_021494 {REF} {Length: 14557} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=50.1]; AAA domain (dynein-related subfamily) [PF07728.16, score=50.0]; P-loop containing dynein motor region [PF12775.9, score=34.4]; AAA ATPase domain [PF13191.8, score=30.3]; Sigma-54 interaction domain [PF14532.8, score=25.6]; AAA domain [PF13401.8, score=24.6]; ABC transporter [PF00005.29, score=19.8]; AAA domain [PF13173.8, score=18.7]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=416, Expect=1e-115]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=417, Expect=4e-116]} {RNA1509_12689} {RNA1310_46.1} {RNA815_60}

Cumulative graph for MligTC455_21650

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.65 4.102 0.52355 1.00000
RegionR2 0.763 4.102 0.15017 0.48384
RegionR3 0.528 4.102 0.17156 0.69726
RegionR4 -0.689 4.102 0.17894 0.44805
RegionR5 -1.102 4.102 0.00399 0.02927
RegionR6 -0.175 4.102 0.66678 1.00000
RegionR7 0.293 4.102 0.55336 1.00000
RegionR8 1.032 4.102 0.06691 0.49809

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.305 4.102 0.08711 0.79173
RegenerationR2 0.515 4.102 0.24689 0.69435
RegenerationR3 -0.216 4.102 0.67535 0.93882
RegenerationR4 -0.198 4.102 0.71394 0.95874
RegenerationR5 0.324 4.102 0.51770 0.86832
RegenerationR6 0.441 4.102 0.39784 0.73600
RegenerationBL 0.125 4.102 0.83860 1.00000
RegenerationTP -0.598 4.102 0.34432 0.78718


Genes with expression patterns similar to MligTC455_21650

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21650 667 13.89 Mlig455_021494

Neo: -

Age: Up-Down-Down

 RNF213 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_021494 {REF} {Length: 14557} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=50.1]; AAA domain (dynein-related subfamily) [PF07728.16, score=50.0]; P-loop containing dynein motor region [PF12775.9, score=34.4]; AAA ATPase domain [PF13191.8, score=30.3]; Sigma-54 interaction domain [PF14532.8, score=25.6]; AAA domain [PF13401.8, score=24.6]; ABC transporter [PF00005.29, score=19.8]; AAA domain [PF13173.8, score=18.7]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=416, Expect=1e-115]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=417, Expect=4e-116]} {RNA1509_12689} {RNA1310_46.1} {RNA815_60}
2. MligTC455_21652 676 14.09 Mlig455_067379

Neo: -

Age: Up-Up-Down

 RNF213 5.98 0.999 1.000 1.000 0.998 0.983 1.000 Mlig455_067379 {REF} {Length: 15370} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=105, Expect=1e-21]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=95.9, Expect=5e-19]} {RNA1509_1560, RNA1509_26848, RNA1509_29772, RNA1509_33163, RNA1509_47087, RNA1509_54727} {RNA1310_46.1, RNA1509_26848, RNA1509_29772, RNA1509_33163, RNA1509_47087, RNA1509_54727} {RNA1509_26848, RNA1509_29772, RNA1509_33163, RNA1509_47087, RNA1509_54727, RNA815_60}
3. MligTC455_51992 612 12.74 Mlig455_070042

Neo: -

Age: Up-Down-Down

Region-enriched R2: 1.736/0.03165

 2.625 - - 0.761 - 0.914 0.950 Mlig455_070042 {REF} {Length: 2777} {RNA1509_42751} {RNA1310_31740.1} {RNA815_21370.1}
4. MligTC455_45779 1204 25.08 Mlig455_033999

Neo: -

Age: -

Region-enriched R4: 2.197/0.00003
Region-enriched R5: 1.074/0.01372

 STRN3 1.881 - - - 0.928 0.953 - Mlig455_033999 {REF} {Length: 4796} {Pfam: Striatin family [PF08232.14, score=151.3]; WD domain, G-beta repeat [PF00400.34, score=106.2]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=26.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.2]} {Human: ENSG00000196792, STRN3, striatin 3, [Score=313, Expect=2e-93]; ENSG00000115808, STRN, striatin, [Score=307, Expect=1e-91]; ENSG00000090372, STRN4, striatin 4, [Score=303, Expect=3e-90]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [Score=483, Expect=2e-158]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [Score=303, Expect=5e-91]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [RH, Score=282, Expect=7e-84]} {Smed: dd_Smed_v6_8286_0_1, dd_Smed_v6_8286_0_1, [Score=266, Expect=5e-77]} {RNA1509_4159, RNA1509_44682} {RNA1310_1645.1, RNA1509_44682} {RNA1509_44682, RNA815_5062}
5. MligTC455_32810 1118 23.3 Mlig455_053373

Neo: -

Age: -

 WLS 1.765 - - 0.815 - 0.950 - Mlig455_053373 {REF} {Length: 3703} {TRANSSPLICED} {Pfam: Wnt-binding factor required for Wnt secretion [PF06664.14, score=249.2]} {Human: ENSG00000116729, WLS, wntless Wnt ligand secretion mediator, [RH, Score=404, Expect=4e-134]} {Mouse: ENSMUSG00000028173, Wls, wntless WNT ligand secretion mediator, [RH, Score=396, Expect=2e-131]} {Dmel: FBgn0036141, wls, wntless, [RH, Score=400, Expect=9e-133]} {Celegans: WBGene00003246, mig-14, Protein wntless homolog, [RH, Score=309, Expect=6e-98]} {Smed: dd_Smed_v6_9546_0_1, dd_Smed_v6_9546_0_1, [RH, Score=325, Expect=1e-105]} {RNA1509_11679, RNA1509_47528} {RNA1310_8508, RNA1509_11679, RNA1509_47528} {RNA1509_11679, RNA1509_47528, RNA815_6300}
6. MligTC455_27796 664 13.84 Mlig455_005664

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.450

 HELZ2 1.755 - - - 0.794 0.961 - Mlig455_005664 {REF} {Length: 8120} {Pfam: RNB domain [PF00773.21, score=158.5]; AAA domain [PF13086.8, score=134.0]; AAA domain [PF13087.8, score=128.8]; AAA domain [PF13604.8, score=26.8]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=21.9]; UvrD-like helicase C-terminal domain [PF13361.8, score=19.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000130589, HELZ2, helicase with zinc finger 2, [Score=148, Expect=6e-35]} {Mouse: ENSMUSG00000027580, Helz2, helicase with zinc finger 2, transcriptional coactivator, [Score=146, Expect=3e-34]} {Dmel: FBgn0039183, Dis3, [Score=110, Expect=8e-24]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [Score=103, Expect=8e-22]} {Smed: dd_Smed_v6_8176_0_1, dd_Smed_v6_8176_0_1, [RH, Score=326, Expect=7e-90]} {RNA1509_18632} {RNA1310_275} {RNA815_982.1}
7. MligTC455_42586 356 7.43 Mlig455_042687

Neo: -

Age: -

 1.744 - - - - 0.950 0.794 Mlig455_042687 {REF} {Length: 785} {TRANSSPLICED} {RNA1509_8877} {RNA1310_20034} {RNA815_32182}
8. MligTC455_21625 279 5.81 Mlig455_006958

Neo: -

Age: -

 DNMBP 1.69 - - 0.958 0.732 - - Mlig455_006958 {REF} {Length: 2943} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=98.5]; BAR domain [PF03114.20, score=19.7]} {Human: ENSG00000107554, DNMBP, dynamin binding protein, [Score=115, Expect=1e-25]} {Mouse: ENSMUSG00000025195, Dnmbp, dynamin binding protein, [Score=115, Expect=4e-26]} {Dmel: FBgn0024277, trio, [Score=60.5, Expect=6e-09]} {Celegans: WBGene00006805, unc-73, Guanine nucleotide exchange factor UNC-73B, [Score=62.0, Expect=1e-09]} {Smed: dd_Smed_v6_7179_0_1, dd_Smed_v6_7179_0_1, [Score=98.2, Expect=7e-21]} {RNA1509_29910} {RNA1310_5218.1, RNA1509_29910} {RNA1509_29910, RNA815_5327}
9. MligTC455_45661 937 19.52 Mlig455_051628

Neo: -

Age: -

Region-enriched R4: 1.869/0.00027

 ABHD17A 1.688 - - - - 0.954 0.734 Mlig455_051628 {REF} {Length: 2153} {Pfam: Serine aminopeptidase, S33 [PF12146.10, score=20.8]} {Human: ENSG00000129968, ABHD17A, abhydrolase domain containing 17A, [Score=110, Expect=7e-30]; ENSG00000136379, ABHD17C, abhydrolase domain containing 17C, [Score=108, Expect=2e-29]} {Mouse: ENSMUSG00000003346, Abhd17a, abhydrolase domain containing 17A, [Score=111, Expect=9e-32]; ENSMUSG00000038459, Abhd17c, abhydrolase domain containing 17C, [Score=106, Expect=1e-28]} {Dmel: FBgn0053096, CG33096, [Score=100, Expect=9e-27]} {Celegans: WBGene00045192, aho-3, [Score=104, Expect=5e-28]} {Smed: dd_Smed_v6_8263_0_1, dd_Smed_v6_8263_0_1, [Score=91.7, Expect=3e-23]} {RNA1509_54437} {RNA1310_10318} {RNA815_22053.1}
10. MligTC455_33454 464 9.67 Mlig455_036962, Mlig455_069816

Neo: -

Age: Down-Up-Down

 1.677 - - - - 0.721 0.956

Mlig455_036962 {REF} {Length: 2292} {Pfam: Glycosyltransferase family 87 [PF09594.12, score=21.6]; Protein melan-A [PF14991.8, score=21.4]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=20.7]; Domain of unknown function (DUF4381) [PF14316.8, score=20.2]} {RNA1509_36524} {RNA1310_29115.2} {RNA815_12947.1}

Mlig455_069816 {REF} {Length: 1681} {Pfam: Glycosyltransferase family 87 [PF09594.12, score=19.7]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=19.5]} {RNA1509_36524} {RNA1310_29115.2} {RNA815_12947.1}
11. MligTC455_48474 1748 36.43 Mlig455_044967, Mlig455_044980, Mlig455_044992

Neo: -

Age: -

Region-enriched R5: 1.107/0.00846

 TRIM37 0.983 - - - 0.983 - -

Mlig455_044967 {REF} {Length: 3872} {Pfam: B-box zinc finger [PF00643.26, score=30.3]} {Human: ENSG00000108395, TRIM37, tripartite motif containing 37, [Score=490, Expect=6e-163]} {Mouse: ENSMUSG00000018548, Trim37, tripartite motif-containing 37, [Score=490, Expect=6e-163]} {Smed: dd_Smed_v6_10751_0_1, dd_Smed_v6_10751_0_1, [Score=483, Expect=1e-159]} {RNA1509_15477, RNA1509_50011} {RNA1310_2416, RNA1509_50011} {RNA1509_50011, RNA815_2631.1}

Mlig455_044980 {REF} {Length: 4243} {Pfam: B-box zinc finger [PF00643.26, score=31.1]} {Human: ENSG00000108395, TRIM37, tripartite motif containing 37, [Score=431, Expect=4e-143]} {Mouse: ENSMUSG00000018548, Trim37, tripartite motif-containing 37, [Score=430, Expect=5e-143]} {Smed: dd_Smed_v6_10751_0_1, dd_Smed_v6_10751_0_1, [Score=419, Expect=8e-138]} {RNA1509_11874} {RNA1310_2416} {RNA815_2631.1}

Mlig455_044992 {REF} {Length: 3540} {Pfam: B-box zinc finger [PF00643.26, score=29.9]; MATH domain [PF00917.28, score=29.9]} {Human: ENSG00000108395, TRIM37, tripartite motif containing 37, [Score=585, Expect=0.0]} {Mouse: ENSMUSG00000018548, Trim37, tripartite motif-containing 37, [Score=587, Expect=0.0]} {Smed: dd_Smed_v6_10751_0_1, dd_Smed_v6_10751_0_1, [Score=582, Expect=0.0]} {RNA1509_11874} {RNA1310_2416} {RNA815_2631.1}
12. MligTC455_09626 272 5.66 Mlig455_026162

Neo: -

Age: -

 0.982 - - - 0.982 - - Mlig455_026162 {REF} {Length: 2431} {TRANSSPLICED} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=105.0]} {Celegans: WBGene00019763, galt-1, Beta-1,4-galactosyltransferase galt-1, [RH, Score=103, Expect=8e-24]} {Smed: dd_Smed_v6_12154_0_1, dd_Smed_v6_12154_0_1, [RH, Score=214, Expect=8e-65]} {RNA1509_16641, RNA1509_37951} {RNA1310_21332, RNA1509_37951} {RNA1509_37951, RNA815_8309}
13. MligTC455_43514 599 12.48 Mlig455_008579

Neo: -

Age: -

 OSBPL9 0.98 - - - - 0.980 - Mlig455_008579 {REF} {Length: 4182} {Pfam: Oxysterol-binding protein [PF01237.20, score=252.0]; PH domain [PF00169.31, score=48.5]; Pleckstrin homology domain [PF15409.8, score=30.7]; Protein of unknown function (DUF2722) [PF10846.10, score=20.4]; Pleckstrin homology domain [PF15413.8, score=19.2]} {Human: ENSG00000117859, OSBPL9, oxysterol binding protein like 9, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000028559, Osbpl9, oxysterol binding protein-like 9, [RH, Score=642, Expect=0.0]} {Dmel: FBgn0033463, CG1513, [RH, Score=615, Expect=0.0]} {Celegans: WBGene00016331, obr-4, Oxysterol-binding protein, [RH, Score=458, Expect=2e-150]} {Smed: dd_Smed_v6_5947_0_1, dd_Smed_v6_5947_0_1, [RH, Score=602, Expect=0.0]} {RNA1509_43844, RNA1509_8406} {RNA1310_2180.1, RNA1509_43844, RNA1509_8406} {RNA1509_43844, RNA1509_8406, RNA815_7482.1}
14. MligTC455_33396 487 10.16 Mlig455_055919

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.313

Region-enriched R2: 2.574/0.00387

 DNAH1 0.967 - - - - 0.967 - Mlig455_055919 {REF} {Length: 12844} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=520.4]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=433.6]; Dynein heavy chain C-terminal domain [PF18199.3, score=396.5]; P-loop containing dynein motor region D4 [PF12780.9, score=336.0]; ATP-binding dynein motor region [PF12781.9, score=305.8]; P-loop containing dynein motor region [PF12775.9, score=271.1]; Microtubule-binding stalk of dynein motor [PF12777.9, score=165.7]; Dynein heavy chain AAA lid domain [PF18198.3, score=161.1]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=155.0]; Dynein heavy chain AAA lid domain [PF17852.3, score=107.7]; AAA+ lid domain [PF17857.3, score=77.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=73.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=35.9]; AAA domain [PF13238.8, score=29.9]; AAA domain [PF13401.8, score=28.7]; AAA ATPase domain [PF13191.8, score=20.5]; Magnesium chelatase, subunit ChlI [PF01078.23, score=19.7]; DEAD/DEAH box helicase [PF00270.31, score=18.8]; Type III restriction enzyme, res subunit [PF04851.17, score=18.8]} {Human: ENSG00000114841, DNAH1, dynein axonemal heavy chain 1, [RH, Score=5214, Expect=0.0]} {Mouse: ENSMUSG00000019027, Dnah1, dynein, axonemal, heavy chain 1, [RH, Score=5198, Expect=0.0]} {Dmel: FBgn0013810, Dhc36C, Dynein heavy chain at 36C, [Score=2866, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1304, Expect=0.0]} {Smed: dd_Smed_v6_6790_0_1, dd_Smed_v6_6790_0_1, [RH, Score=4107, Expect=0.0]} {RNA1509_1216} {RNA1310_62} {RNA815_116.1}
15. MligTC455_33954 280 5.84 Mlig455_058149

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_058149 {REF} {Length: 3221} {RNA1310_32323} {RNA815_59403}
16. MligTC455_35401 391 8.14 Mlig455_009584

Neo: -

Age: -

 DIRC2 0.962 - - - - 0.962 - Mlig455_009584 {REF} {Length: 3235} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=46.8]} {Human: ENSG00000138463, DIRC2, disrupted in renal carcinoma 2, [Score=161, Expect=1e-43]} {Mouse: ENSMUSG00000022848, Dirc2, disrupted in renal carcinoma 2 (human), [Score=166, Expect=3e-45]} {Dmel: FBgn0033196, CG1358, [Score=87.4, Expect=4e-18]} {Celegans: WBGene00016586, C42C1.8, [Score=61.6, Expect=6e-10]} {Smed: dd_Smed_v6_4596_0_1, dd_Smed_v6_4596_0_1, [RH, Score=128, Expect=5e-32]} {RNA1509_12696} {RNA1310_17284} {RNA815_7063}
17. MligTC455_37002 920 19.17 Mlig455_039160, Mlig455_051654

Neo: Int S/G2/M

Age: -

 ZW10 0.961 - - - - 0.961 -

Mlig455_039160 {REF} {Length: 3909} {TRANSSPLICED} {Pfam: Centromere/kinetochore Zw10 [PF06248.15, score=114.4]} {Human: ENSG00000086827, ZW10, zw10 kinetochore protein, [RH, Score=198, Expect=6e-53]} {Mouse: ENSMUSG00000032264, Zw10, zw10 kinetochore protein, [RH, Score=191, Expect=1e-50]} {Celegans: WBGene00017643, czw-1, Centromere/kinetochore protein zw10 homolog, [RH, Score=95.9, Expect=4e-20]} {Smed: dd_Smed_v6_7277_0_1, dd_Smed_v6_7277_0_1, [RH, Score=71.2, Expect=1e-12]} {RNA1509_13296, RNA1509_51904} {RNA1310_7128, RNA1509_13296, RNA1509_51904} {RNA1509_13296, RNA1509_51904, RNA815_2289}

Mlig455_051654 {REF} {Length: 5231} {TRANSSPLICED} {Pfam: Centromere/kinetochore Zw10 [PF06248.15, score=114.3]} {Human: ENSG00000086827, ZW10, zw10 kinetochore protein, [RH, Score=198, Expect=5e-53]} {Mouse: ENSMUSG00000032264, Zw10, zw10 kinetochore protein, [RH, Score=190, Expect=2e-50]} {Celegans: WBGene00017643, czw-1, Centromere/kinetochore protein zw10 homolog, [RH, Score=97.4, Expect=1e-20]} {Smed: dd_Smed_v6_7277_0_1, dd_Smed_v6_7277_0_1, [RH, Score=73.6, Expect=2e-13]} {RNA1509_13296} {RNA1310_7128} {RNA815_2289}
18. MligTC455_29906 249 5.2 Mlig455_023040, Mlig455_069770

Neo: -

Age: Down-Down-Up

Region-enriched R4: 3.873/0.00145

 MAP3K4 0.96 - - - - 0.960 -

Mlig455_023040 {REF} {Length: 3009} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=164.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.6]; Ankyrin repeats (3 copies) [PF12796.9, score=82.1]; Ankyrin repeat [PF13606.8, score=58.3]; Ankyrin repeats (many copies) [PF13637.8, score=53.6]; Ankyrin repeat [PF00023.32, score=49.8]; Ankyrin repeats (many copies) [PF13857.8, score=49.3]; Fungal protein kinase [PF17667.3, score=22.1]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=128, Expect=8e-30]; ENSG00000165238, WNK2, WNK lysine deficient protein kinase 2, [Score=122, Expect=4e-28]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=124, Expect=1e-28]; ENSMUSG00000037989, Wnk2, WNK lysine deficient protein kinase 2, [Score=118, Expect=6e-27]; ENSMUSG00000041245, Wnk3, WNK lysine deficient protein kinase 3, [Score=118, Expect=3e-27]} {Dmel: FBgn0024329, Mekk1, [Score=127, Expect=5e-30]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=119, Expect=2e-27]} {Smed: dd_Smed_v6_4849_0_1, dd_Smed_v6_4849_0_1, [Score=118, Expect=3e-27]} {RNA1509_27731} {RNA1310_10050} {RNA815_10088.1}

Mlig455_069770 {REF} {Length: 3989} {Pfam: Protein kinase domain [PF00069.27, score=313.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=242.6]; Ankyrin repeats (3 copies) [PF12796.9, score=88.3]; Ankyrin repeat [PF13606.8, score=50.2]; Ankyrin repeats (many copies) [PF13637.8, score=50.2]; Fungal protein kinase [PF17667.3, score=49.8]; Ankyrin repeats (many copies) [PF13857.8, score=49.5]; Ankyrin repeat [PF00023.32, score=42.3]; ABC1 atypical kinase-like domain [PF03109.18, score=35.1]; Phosphotransferase enzyme family [PF01636.25, score=28.6]; Kinase-like [PF14531.8, score=26.9]; Ternary complex associated domain 9 [PF19974.1, score=22.2]; Seadornavirus VP7 [PF07387.13, score=21.6]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=132, Expect=1e-30]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=128, Expect=1e-30]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=129, Expect=7e-30]; ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=125, Expect=1e-29]; ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=124, Expect=3e-28]} {Dmel: FBgn0024329, Mekk1, [Score=131, Expect=1e-30]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=128, Expect=9e-30]} {Smed: dd_Smed_v6_4849_0_1, dd_Smed_v6_4849_0_1, [Score=118, Expect=9e-27]} {RNA1509_27731} {RNA1310_10050} {RNA815_9449.1}
19. MligTC455_37921 1279 26.64 Mlig455_052424

Neo: -

Age: -

 BEST4 0.96 - - - - 0.960 - Mlig455_052424 {REF} {Length: 4077} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=176.6]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=172, Expect=1e-46]} {Mouse: ENSMUSG00000052819, Best2, bestrophin 2, [Score=169, Expect=2e-45]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=192, Expect=2e-52]} {Celegans: WBGene00206487, best-19, Bestrophin homolog, [Score=159, Expect=5e-42]} {Smed: dd_Smed_v6_2084_0_1, dd_Smed_v6_2084_0_1, [Score=296, Expect=2e-94]} {RNA1509_22717, RNA1509_3347} {RNA1310_9226, RNA1509_22717} {RNA1509_22717, RNA815_3180}
20. MligTC455_23792 179 3.73 Mlig455_033630

Neo: -

Age: -

 CDK6 0.958 - - - - 0.958 - Mlig455_033630 {REF} {Length: 2758} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=158.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=91.9]} {Human: ENSG00000105810, CDK6, cyclin dependent kinase 6, [Score=140, Expect=3e-37]; ENSG00000135446, CDK4, cyclin dependent kinase 4, [Score=138, Expect=9e-37]} {Mouse: ENSMUSG00000006728, Cdk4, cyclin-dependent kinase 4, [Score=149, Expect=1e-41]} {Dmel: FBgn0016131, Cdk4, Cyclin-dependent kinase 4, [Score=137, Expect=7e-37]} {Celegans: WBGene00000405, cdk-1, Cyclin-dependent kinase 1, [Score=120, Expect=1e-30]} {Smed: dd_Smed_v6_6179_0_5, dd_Smed_v6_6179_0_5, [Score=135, Expect=2e-36]} {RNA1509_24860, RNA1509_58426} {RNA1310_17562, RNA1509_24860, RNA1509_58426} {RNA1509_24860, RNA1509_58426, RNA815_8098}
21. MligTC455_40857 334 6.96 Mlig455_044482

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_044482 {REF} {Length: 625} {NoTransDecoderORF} {RNA1509_38286} {RNA1310_64155, RNA1509_38286} {RNA1509_38286, RNA815_33531}
22. MligTC455_33683 147 3.06 Mlig455_047949

Neo: -

Age: -

Region-enriched R8: 8.617/0.00004

 0.952 - - - - 0.952 - Mlig455_047949 {REF} {Length: 2457} {NoTransDecoderORF} {RNA1509_41509} {RNA1310_36892} {RNA815_48637}
23. MligTC455_19164 643 13.39 Mlig455_066812

Neo: -

Age: -

 TBL2 0.951 - - - - 0.951 - Mlig455_066812 {REF} {Length: 2791} {Pfam: WD domain, G-beta repeat [PF00400.34, score=72.6]} {Human: ENSG00000106638, TBL2, transducin beta like 2, [RH, Score=296, Expect=4e-96]} {Mouse: ENSMUSG00000005374, Tbl2, transducin (beta)-like 2, [RH, Score=283, Expect=2e-90]} {Dmel: FBgn0032030, Wdr82, WD repeat domain 82, [Score=51.2, Expect=9e-07]} {Celegans: WBGene00009784, F46C5.9, [RH, Score=174, Expect=5e-49]} {Smed: dd_Smed_v6_4372_0_1, dd_Smed_v6_4372_0_1, [RH, Score=249, Expect=1e-77]} {RNA1509_12484, RNA1509_27098, RNA1509_8303} {RNA1310_11971, RNA1509_12484, RNA1509_27098, RNA1509_8303} {RNA1509_12484, RNA1509_27098, RNA1509_8303, RNA815_4594}
24. MligTC455_21697 2521 52.53 Mlig455_041412, Mlig455_041449

Neo: -

Age: -

 0.951 - - - 0.951 - -

Mlig455_041412 {REF} {Length: 7796} {TRANSSPLICED} {RNA1509_3457, RNA1509_36712, RNA1509_55043, RNA1509_8934} {RNA1310_1968.1, RNA1509_3457, RNA1509_36712, RNA1509_55043} {RNA1509_3457, RNA1509_36712, RNA1509_55043, RNA815_2193.1}

Mlig455_041449 {REF} {Length: 7329} {TRANSSPLICED} {RNA1509_8934} {RNA1310_1968.1, RNA1509_8934} {RNA1509_8934, RNA815_2193.1}
25. MligTC455_53938 904 18.84 Mlig455_016214

Neo: -

Age: logFC(26M/2M)=-0.327

 TMEM208 0.95 - - - - 0.950 - Mlig455_016214 {REF} {Length: 3600} {TRANSSPLICED} {Pfam: SRP-independent targeting protein 2/TMEM208 [PF05620.13, score=142.0]} {Human: ENSG00000168701, TMEM208, transmembrane protein 208, [RH, Score=138, Expect=4e-37]} {Mouse: ENSMUSG00000014856, Tmem208, transmembrane protein 208, [RH, Score=141, Expect=2e-38]} {Dmel: FBgn0034059, CG8320, [RH, Score=120, Expect=5e-31]} {Celegans: WBGene00011033, R05D11.5, [RH, Score=70.9, Expect=5e-14]} {Smed: dd_Smed_v6_12915_0_1, dd_Smed_v6_12915_0_1, [RH, Score=127, Expect=2e-33]} {RNA1509_15787} {RNA1310_11648} {RNA815_13651}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA