M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_21812

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21812 20 0.42 Mlig455_019683

Neo: -

Age: -

 NMUR2 Mlig455_019683 {REF} {Length: 2876} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=154.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=22.7]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=22.5]; Olfactory receptor [PF13853.8, score=21.0]} {Human: ENSG00000132911, NMUR2, neuromedin U receptor 2, [RH, Score=172, Expect=2e-48]} {Mouse: ENSMUSG00000026237, Nmur1, neuromedin U receptor 1, [RH, Score=173, Expect=4e-49]} {Dmel: FBgn0037100, CapaR, Capability receptor, [RH, Score=210, Expect=1e-62]} {Celegans: WBGene00019616, nmur-2, NMUR (NeuroMedin U Receptor) homolog, [RH, Score=209, Expect=4e-63]} {Smed: dd_Smed_v6_17801_0_1, dd_Smed_v6_17801_0_1, [RH, Score=257, Expect=1e-81]} {RNA1310_96825}

Cumulative graph for MligTC455_21812

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.661 0.789 0.99973 1.00000
RegionR2 2.233 0.789 0.40547 0.79946
RegionR3 0.084 0.789 0.99917 1.00000
RegionR4 0.184 0.789 1.00000 1.00000
RegionR5 0.331 0.789 0.99948 1.00000
RegionR6 0.155 0.789 0.99952 1.00000
RegionR7 -0.448 0.789 0.99988 1.00000
RegionR8 -0.879 0.789 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.423 0.789 1.00000 1.00000
RegenerationR2 1.79 0.789 0.64581 0.93409
RegenerationR3 3.697 0.789 0.28397 0.71581
RegenerationR4 0.428 0.789 0.62590 0.92209
RegenerationR5 2.363 0.789 0.45868 0.83558
RegenerationR6 1.179 0.789 0.62709 0.88495
RegenerationBL -0.245 0.789 0.99917 1.00000
RegenerationTP 2.734 0.789 0.45754 0.87269


Genes with expression patterns similar to MligTC455_21812

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21812 20 0.42 Mlig455_019683

Neo: -

Age: -

 NMUR2 2 - - - 1.000 - 1.000 Mlig455_019683 {REF} {Length: 2876} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=154.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=22.7]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=22.5]; Olfactory receptor [PF13853.8, score=21.0]} {Human: ENSG00000132911, NMUR2, neuromedin U receptor 2, [RH, Score=172, Expect=2e-48]} {Mouse: ENSMUSG00000026237, Nmur1, neuromedin U receptor 1, [RH, Score=173, Expect=4e-49]} {Dmel: FBgn0037100, CapaR, Capability receptor, [RH, Score=210, Expect=1e-62]} {Celegans: WBGene00019616, nmur-2, NMUR (NeuroMedin U Receptor) homolog, [RH, Score=209, Expect=4e-63]} {Smed: dd_Smed_v6_17801_0_1, dd_Smed_v6_17801_0_1, [RH, Score=257, Expect=1e-81]} {RNA1310_96825}
2. MligTC455_51806 83 1.73 Mlig455_037702, Mlig455_046362

Neo: -

Age: -

 GPSM2 1.822 - - - 0.964 - 0.858

Mlig455_037702 {REF} {Length: 3216} {Pfam: Tetratricopeptide repeat [PF13424.8, score=100.7]; Tetratricopeptide repeat [PF13176.8, score=98.7]; Tetratricopeptide repeat [PF00515.30, score=93.3]; GoLoco motif [PF02188.19, score=66.5]; Tetratricopeptide repeat [PF07719.19, score=54.7]; Tetratricopeptide repeat [PF13181.8, score=43.2]; Tetratricopeptide repeat [PF13374.8, score=34.5]; Rapsyn N-terminal myristoylation and linker region [PF10579.11, score=20.8]} {Human: ENSG00000121957, GPSM2, G protein signaling modulator 2, [RH, Score=521, Expect=3e-176]} {Mouse: ENSMUSG00000026930, Gpsm1, G-protein signalling modulator 1 (AGS3-like, C. elegans), [RH, Score=494, Expect=2e-166]} {Dmel: FBgn0040080, pins, partner of inscuteable, [RH, Score=534, Expect=0.0]} {Celegans: WBGene00000092, ags-3, Activator of G protein Signalling, [Score=256, Expect=4e-76]} {Smed: dd_Smed_v6_6548_1_1, dd_Smed_v6_6548_1_1, [RH, Score=462, Expect=3e-154]} {RNA1310_18538} {RNA815_41322}

Mlig455_046362 {REF} {Length: 3324} {Pfam: Tetratricopeptide repeat [PF13424.8, score=119.4]; Tetratricopeptide repeat [PF13176.8, score=96.3]; Tetratricopeptide repeat [PF00515.30, score=93.0]; GoLoco motif [PF02188.19, score=85.6]; Tetratricopeptide repeat [PF07719.19, score=54.4]; Tetratricopeptide repeat [PF13181.8, score=42.7]; Tetratricopeptide repeat [PF13374.8, score=34.2]; Rapsyn N-terminal myristoylation and linker region [PF10579.11, score=21.7]} {Human: ENSG00000121957, GPSM2, G protein signaling modulator 2, [Score=545, Expect=0.0]} {Mouse: ENSMUSG00000027883, Gpsm2, G-protein signalling modulator 2 (AGS3-like, C. elegans), [RH, Score=535, Expect=0.0]} {Dmel: FBgn0040080, pins, partner of inscuteable, [RH, Score=531, Expect=1e-180]} {Celegans: WBGene00000092, ags-3, Activator of G protein Signalling, [RH, Score=266, Expect=1e-79]} {Smed: dd_Smed_v6_6548_1_1, dd_Smed_v6_6548_1_1, [RH, Score=474, Expect=1e-158]} {RNA1310_18538} {RNA815_41322}
3. MligTC455_37805 538 11.21 Mlig455_023154, Mlig455_023305

Neo: -

Age: Down-Up-Down

Region-enriched R3: 4.602/0.00000

 TRPM3 1.812 - - - 0.964 - 0.848

Mlig455_023154 {REF} {Length: 1152} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=28.1]; Ankyrin repeats (3 copies) [PF12796.9, score=24.2]; Ankyrin repeats (many copies) [PF13857.8, score=24.1]} {RNA1509_20239} {RNA1310_2354} {RNA815_15927}

Mlig455_023305 {REF} {Length: 6732} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=101.6]; Ankyrin repeats (many copies) [PF13637.8, score=81.7]; Ankyrin repeats (many copies) [PF13857.8, score=54.3]; Ankyrin repeat [PF13606.8, score=51.8]; Ankyrin repeat [PF00023.32, score=33.5]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=58.2, Expect=2e-07]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=56.6, Expect=5e-07]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=56.2, Expect=5e-07]; ENSG00000135299, ANKRD6, ankyrin repeat domain 6, [Score=56.2, Expect=2e-07]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=58.9, Expect=7e-08]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=58.2, Expect=1e-07]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=59.7, Expect=3e-08]} {Celegans: WBGene00013835, mlt-4, Molting protein MLT-4, [Score=58.2, Expect=4e-08]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=93.2, Expect=7e-19]} {RNA1509_20239} {RNA1310_2354} {RNA815_15927}
4. MligTC455_18539 1250 26.03 Mlig455_003030

Neo: -

Age: logFC(26M/2M)=-0.308

Region-specific R2: 5.210

Region-enriched R2: 4.715/0.00000
Region-enriched R3: 3.959/0.00000

 SFRP2 1.771 - - - 0.820 - 0.951 Mlig455_003030 {REF} {Length: 2108} {Pfam: Fz domain [PF01392.24, score=88.0]} {Human: ENSG00000145423, SFRP2, secreted frizzled related protein 2, [RH, Score=166, Expect=7e-48]} {Mouse: ENSMUSG00000027996, Sfrp2, secreted frizzled-related protein 2, [RH, Score=165, Expect=2e-47]; ENSMUSG00000031548, Sfrp1, secreted frizzled-related protein 1, [RH, Score=157, Expect=2e-44]} {Dmel: FBgn0027342, fz4, frizzled 4, [Score=100, Expect=2e-22]} {Celegans: WBGene00022242, sfrp-1, Secreted Frizzled-Related Protein, [RH, Score=163, Expect=6e-47]} {Smed: dd_Smed_v6_8832_0_1, dd_Smed_v6_8832_0_1, [RH, Score=153, Expect=4e-43]} {RNA1509_32854, RNA1509_44148, RNA1509_5709} {RNA1310_15264, RNA1509_32854, RNA1509_44148, RNA1509_5709} {RNA1509_32854, RNA1509_44148, RNA1509_5709, RNA815_7067}
5. MligTC455_33287 444 9.24 Mlig455_061811

Neo: -

Age: -

Region-enriched R2: 4.031/0.00004

 1.755 - - - 0.950 - 0.805 Mlig455_061811 {REF} {Length: 782} {RNA1509_48963} {RNA1310_53012} {RNA815_23468}
6. MligTC455_50362 295 6.16 Mlig455_012011

Neo: -

Age: logFC(26M/2M)=1.080

Region-enriched R2: 3.396/0.00236

 1.714 - - - 0.962 - 0.752 Mlig455_012011 {REF} {Length: 947} {RNA1509_58656} {RNA1310_57201.1} {RNA815_30531.1}
7. MligTC455_47480 197 4.11 Mlig455_025126

Neo: -

Age: -

Region-enriched R2: 4.426/0.00106

 1.685 - - - 0.735 - 0.950 Mlig455_025126 {REF} {Length: 2071} {RNA1310_46346} {RNA815_22558.1}
8. MligTC455_44904 1501 31.27 Mlig455_021814

Neo: -

Age: Down-Up-Up

Region-specific R2: 3.865

Region-enriched R2: 3.792/0.00000

 1.665 - - - 0.952 - 0.713 Mlig455_021814 {REF} {Length: 959} {RNA1509_15805} {RNA1310_67099.1, RNA1509_15805} {RNA1509_15805, RNA815_17533}
9. MligTC455_18541 1108 23.09 Mlig455_003326

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.290

Region-enriched R2: 4.433/0.00000
Region-enriched R3: 3.875/0.00000

 SFRP2 1.658 - - - 0.701 - 0.957 Mlig455_003326 {REF} {Length: 2658} {TRANSSPLICED} {Pfam: Fz domain [PF01392.24, score=86.0]} {Human: ENSG00000145423, SFRP2, secreted frizzled related protein 2, [RH, Score=167, Expect=4e-46]} {Mouse: ENSMUSG00000027996, Sfrp2, secreted frizzled-related protein 2, [RH, Score=165, Expect=2e-45]} {Dmel: FBgn0027342, fz4, frizzled 4, [Score=101, Expect=8e-22]} {Celegans: WBGene00022242, sfrp-1, Secreted Frizzled-Related Protein, [RH, Score=163, Expect=1e-44]} {Smed: dd_Smed_v6_13985_0_1, dd_Smed_v6_13985_0_1, [RH, Score=157, Expect=1e-42]} {RNA1509_5709} {RNA1310_15264} {RNA815_7067}
10. MligTC455_36153 63 1.31 Mlig455_068201

Neo: -

Age: Up-Down-Down

 ZFYVE9 0.993 - - - 0.993 - - Mlig455_068201 {REF} {Length: 2852} {Pfam: Domain of unknown function (DUF3480) [PF11979.10, score=106.6]} {Human: ENSG00000157077, ZFYVE9, zinc finger FYVE-type containing 9, [Score=132, Expect=5e-32]} {Mouse: ENSMUSG00000034557, Zfyve9, zinc finger, FYVE domain containing 9, [Score=134, Expect=7e-33]} {Dmel: FBgn0026369, Sara, Smad anchor for receptor activation, [Score=122, Expect=6e-29]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=50.1, Expect=3e-06]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=82.4, Expect=2e-16]} {RNA1509_39700} {RNA1310_6234.1} {RNA815_2939.1}
11. MligTC455_07699 36 0.75 Mlig455_040321, Mlig455_050261

Neo: -

Age: -

 0.977 - - - - - 0.977

Mlig455_040321 {REF} {Length: 2033} {TRANSSPLICED} {RNA1310_79439} {RNA815_63116}

Mlig455_050261 {REF} {Length: 2510} {RNA1310_86895} {RNA815_64033}
12. MligTC455_24993 233 4.86 Mlig455_050468

Neo: -

Age: Up-Down-Down

 PTPRS 0.976 - - - 0.976 - - Mlig455_050468 {REF} {Length: 2099} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=259.3]; Tyrosine phosphatase family [PF13350.8, score=26.7]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=20.1]} {Human: ENSG00000105426, PTPRS, protein tyrosine phosphatase, receptor type S, [Score=499, Expect=3e-164]; ENSG00000153707, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=497, Expect=2e-163]; ENSG00000282932, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=497, Expect=2e-163]; ENSG00000142949, PTPRF, protein tyrosine phosphatase, receptor type F, [Score=494, Expect=1e-163]} {Mouse: ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [Score=500, Expect=7e-167]; ENSMUSG00000013236, Ptprs, protein tyrosine phosphatase, receptor type, S, [Score=493, Expect=2e-162]; ENSMUSG00000033295, Ptprf, protein tyrosine phosphatase, receptor type, F, [Score=491, Expect=9e-163]} {Dmel: FBgn0000464, Lar, Leukocyte-antigen-related-like, [Score=454, Expect=7e-146]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=318, Expect=9e-100]} {Smed: dd_Smed_v6_9734_0_1, dd_Smed_v6_9734_0_1, [Score=439, Expect=8e-146]} {RNA1509_59220} {RNA1310_403.1} {RNA815_2245.3}
13. MligTC455_44329 510 10.62 Mlig455_026184, Mlig455_026199

Neo: -

Age: -

Region-specific R2: 5.127

Region-enriched R2: 4.824/0.00000
Region-enriched R5: 2.073/0.03126

 0.976 - - - 0.976 - -

Mlig455_026184 {REF} {Length: 724} {RNA1509_29216, RNA1509_32102} {RNA1310_60068, RNA1509_29216} {RNA1509_29216, RNA815_37486}

Mlig455_026199 {REF} {Length: 531} {RNA1509_32102} {RNA1310_60068} {RNA815_37486}
14. MligTC455_24992 222 4.62 Mlig455_040423

Neo: -

Age: Up-Down-Down

 PTPRD 0.974 - - - 0.974 - - Mlig455_040423 {REF} {Length: 5511} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=536.0]; Fibronectin type III domain [PF00041.23, score=69.6]; Tyrosine phosphatase family [PF13350.8, score=37.9]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=33.7]; Inositol hexakisphosphate [PF14566.8, score=24.3]} {Human: ENSG00000282932, PTPRD, protein tyrosine phosphatase, receptor type D, [RH, Score=1019, Expect=0.0]; ENSG00000153707, PTPRD, protein tyrosine phosphatase, receptor type D, [RH, Score=1019, Expect=0.0]; ENSG00000105426, PTPRS, protein tyrosine phosphatase, receptor type S, [RH, Score=1010, Expect=0.0]; ENSG00000142949, PTPRF, protein tyrosine phosphatase, receptor type F, [RH, Score=1009, Expect=0.0]} {Mouse: ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [RH, Score=1023, Expect=0.0]; ENSMUSG00000013236, Ptprs, protein tyrosine phosphatase, receptor type, S, [RH, Score=1011, Expect=0.0]; ENSMUSG00000033295, Ptprf, protein tyrosine phosphatase, receptor type, F, [RH, Score=1004, Expect=0.0]} {Dmel: FBgn0000464, Lar, Leukocyte-antigen-related-like, [RH, Score=928, Expect=0.0]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [RH, Score=723, Expect=0.0]} {Smed: dd_Smed_v6_10176_0_2, dd_Smed_v6_10176_0_2, [RH, Score=962, Expect=0.0]} {RNA1509_45823, RNA1509_59220} {RNA1310_2694.1, RNA1509_45823, RNA1509_59220} {RNA1509_45823, RNA1509_59220, RNA815_2245.1}
15. MligTC455_26677 48 1.01 Mlig455_004596

Neo: -

Age: -

 SDC2 0.974 - - - 0.974 - - Mlig455_004596 {REF} {Length: 3214} {Pfam: Syndecan domain [PF01034.22, score=59.4]; Thyroglobulin type-1 repeat [PF00086.20, score=21.2]} {Human: ENSG00000169439, SDC2, syndecan 2, [RH, Score=62.4, Expect=6e-11]} {Mouse: ENSMUSG00000020592, Sdc1, syndecan 1, [RH, Score=61.6, Expect=5e-10]; ENSMUSG00000017009, Sdc4, syndecan 4, [RH, Score=59.7, Expect=6e-10]} {Smed: dd_Smed_v6_4546_0_1, dd_Smed_v6_4546_0_1, [RH, Score=63.5, Expect=8e-12]} {RNA1310_38573.1} {RNA815_23432}
16. MligTC455_26678 44 0.92 Mlig455_004705

Neo: -

Age: -

 0.974 - - - 0.974 - - Mlig455_004705 {REF} {Length: 311} {NoTransDecoderORF} {RNA1310_55436} {RNA815_42049.1}
17. MligTC455_05183 13 0.27 Mlig455_003637

Neo: -

Age: -

 0.973 - - - 0.973 - - Mlig455_003637 {REF} {Length: 906} {Pfam: PAN domain [PF00024.28, score=19.3]} {Smed: dd_Smed_v6_38541_0_1, dd_Smed_v6_38541_0_1, [Score=57.0, Expect=8e-10]} {RNA1310_45613} {RNA815_17816.1}
18. MligTC455_02244 25 0.53 Mlig455_026007, Mlig455_070432

Neo: -

Age: -

 0.97 - - - 0.970 - -

Mlig455_026007 {REF} {Length: 604} {Smed: dd_Smed_v6_3944_0_1, dd_Smed_v6_3944_0_1, [Score=91.3, Expect=3e-24]} {RNA1310_143494}

Mlig455_070432 {REF} {Length: 1561} {Dmel: FBgn0050419, CG30419, [RH, Score=61.6, Expect=1e-11]} {Smed: dd_Smed_v6_3944_0_1, dd_Smed_v6_3944_0_1, [RH, Score=112, Expect=2e-32]} {RNA1310_143494}
19. MligTC455_39423 421 8.77 Mlig455_048451

Neo: -

Age: -

Region-specific R2: 5.732

Region-enriched R2: 3.988/0.00696

 TCTEX1D2 0.97 - - - - - 0.970 Mlig455_048451 {REF} {Length: 954} {Pfam: Tctex-1 family [PF03645.15, score=51.0]} {Human: ENSG00000213123, TCTEX1D2, Tctex1 domain containing 2, [Score=60.8, Expect=2e-11]; ENSG00000184786, TCTE3, t-complex-associated-testis-expressed 3, [Score=58.2, Expect=4e-10]; ENSG00000275368, TCTE3, t-complex-associated-testis-expressed 3, [Score=58.2, Expect=4e-10]} {Mouse: ENSMUSG00000116780, Gm3417, predicted gene 3417, [RH, Score=62.8, Expect=6e-12]; ENSMUSG00000079710, Gm3448, predicted gene 3448, [RH, Score=62.0, Expect=1e-11]; ENSMUSG00000079707, Tcte3, t-complex-associated testis expressed 3, [RH, Score=62.0, Expect=1e-11]} {Dmel: FBgn0033243, CG14763, [RH, Score=61.6, Expect=8e-12]} {Smed: dd_Smed_v6_5494_0_1, dd_Smed_v6_5494_0_1, [RH, Score=69.7, Expect=5e-15]} {RNA1509_7908} {RNA1310_23636} {RNA815_10299}
20. MligTC455_28483 912 19 Mlig455_056019

Neo: -

Age: -

Region-enriched R2: 1.652/0.01432

 XPO4 0.967 - - - 0.967 - - Mlig455_056019 {REF} {Length: 4372} {TRANSSPLICED} {Human: ENSG00000132953, XPO4, exportin 4, [RH, Score=241, Expect=2e-64]} {Mouse: ENSMUSG00000021952, Xpo4, exportin 4, [RH, Score=241, Expect=7e-65]} {Smed: dd_Smed_v6_10330_0_1, dd_Smed_v6_10330_0_1, [RH, Score=72.4, Expect=1e-12]} {RNA1509_11967, RNA1509_55558} {RNA1310_2509.1, RNA1509_55558} {RNA1509_55558, RNA815_8640}
21. MligTC455_25200 17 0.36 Mlig455_054567

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_054567 {REF} {Length: 992} {NoTransDecoderORF} {RNA1509_11398} {RNA1310_877.1} {RNA815_745}
22. MligTC455_27677 2582 53.78 Mlig455_051394

Neo: -

Age: Down-Up-Up

Region-specific R2: 3.156

Region-enriched R2: 2.518/0.00000

 0.966 - - - 0.966 - - Mlig455_051394 {REF} {Length: 690} {RNA1509_11612, RNA1509_32723, RNA1509_32853} {RNA1310_59474, RNA1509_11612, RNA1509_32723, RNA1509_32853} {RNA1509_11612, RNA1509_32723, RNA1509_32853, RNA815_28024}
23. MligTC455_46470 552 11.5 Mlig455_066293

Neo: -

Age: Down-Down-Up

Region-enriched R2: 3.795/0.00284

 0.966 - - - 0.966 - - Mlig455_066293 {REF} {Length: 896} {RNA1509_9692} {RNA1310_57568} {RNA815_29793}
24. MligTC455_52481 33 0.68 Mlig455_040947

Neo: -

Age: -

 0.965 - - - - - 0.965 Mlig455_040947 {REF} {Length: 1815} {RNA1310_86606} {RNA815_50003.1}
25. MligTC455_29516 38 0.8 Mlig455_029373

Neo: -

Age: Up-Down-Up

 GRIA2 0.964 - - - 0.964 - - Mlig455_029373 {REF} {Length: 3044} {Pfam: Ligand-gated ion channel [PF00060.28, score=103.3]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=63.2]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=23.4]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=158, Expect=3e-39]; ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=158, Expect=3e-39]; ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [Score=157, Expect=5e-39]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=155, Expect=2e-38]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=155, Expect=3e-38]; ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=154, Expect=1e-37]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=153, Expect=1e-37]} {Mouse: ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=159, Expect=2e-39]; ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=158, Expect=2e-39]; ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=155, Expect=2e-38]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=155, Expect=1e-38]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=153, Expect=1e-37]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=152, Expect=1e-37]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=152, Expect=3e-37]; ENSMUSG00000041078, Grid1, glutamate receptor, ionotropic, delta 1, [Score=152, Expect=3e-37]} {Dmel: FBgn0038837, CG3822, [Score=151, Expect=3e-37]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=139, Expect=1e-33]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=241, Expect=1e-71]} {RNA1310_63010} {RNA815_33834}
26. MligTC455_39424 443 9.24 Mlig455_062724

Neo: -

Age: logFC(26M/2M)=-0.363

Region-specific R2: 5.676

Region-enriched R2: 4.122/0.00336

 TCTEX1D2 0.964 - - - - - 0.964 Mlig455_062724 {REF} {Length: 1719} {Pfam: Tctex-1 family [PF03645.15, score=54.9]} {Human: ENSG00000213123, TCTEX1D2, Tctex1 domain containing 2, [Score=62.0, Expect=6e-12]; ENSG00000275368, TCTE3, t-complex-associated-testis-expressed 3, [Score=60.1, Expect=7e-11]; ENSG00000184786, TCTE3, t-complex-associated-testis-expressed 3, [Score=60.1, Expect=7e-11]} {Mouse: ENSMUSG00000116780, Gm3417, predicted gene 3417, [RH, Score=63.9, Expect=2e-12]; ENSMUSG00000079710, Gm3448, predicted gene 3448, [RH, Score=63.2, Expect=3e-12]; ENSMUSG00000079707, Tcte3, t-complex-associated testis expressed 3, [RH, Score=63.2, Expect=3e-12]} {Dmel: FBgn0033243, CG14763, [RH, Score=63.2, Expect=2e-12]} {Smed: dd_Smed_v6_12108_0_1, dd_Smed_v6_12108_0_1, [Score=67.0, Expect=5e-14]} {RNA1509_7908} {RNA1310_23636, RNA1509_7908} {RNA1509_7908, RNA815_10299}
27. MligTC455_23548 13 0.28 Mlig455_029881

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_029881 {REF} {Length: 2293} {RNA1310_58945} {RNA815_43403}
28. MligTC455_34693 336 7 Mlig455_017459

Neo: -

Age: -

Region-enriched R2: 6.024/0.00000
Region-enriched R3: 3.452/0.00414

 FZD4 0.962 - - - - - 0.962 Mlig455_017459 {REF} {Length: 3882} {Pfam: Frizzled/Smoothened family membrane region [PF01534.19, score=335.8]; Fz domain [PF01392.24, score=90.0]} {Human: ENSG00000174804, FZD4, frizzled class receptor 4, [RH, Score=424, Expect=3e-141]} {Mouse: ENSMUSG00000049791, Fzd4, frizzled class receptor 4, [RH, Score=423, Expect=3e-141]} {Dmel: FBgn0001085, fz, frizzled, [Score=306, Expect=2e-95]} {Celegans: WBGene00003006, lin-17, Transmembrane receptor LIN-17, [RH, Score=271, Expect=1e-82]} {Smed: dd_Smed_v6_7210_0_1, dd_Smed_v6_7210_0_1, [RH, Score=473, Expect=3e-160]} {RNA1509_10294} {RNA1310_2672} {RNA815_3209}
29. MligTC455_51161 167 3.48 Mlig455_054766, Mlig455_054793, Mlig455_054886

Neo: -

Age: -

 PCDH11Y 0.962 - - - - - 0.962

Mlig455_054766 {REF} {Length: 3637} {Pfam: Cadherin domain [PF00028.19, score=201.7]; Cadherin-like [PF08266.14, score=34.1]} {Human: ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=257, Expect=7e-70]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=254, Expect=4e-69]; ENSG00000184226, PCDH9, protocadherin 9, [Score=253, Expect=5e-69]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=258, Expect=1e-70]; ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=249, Expect=9e-68]} {Dmel: FBgn0001075, ft, fat, [Score=209, Expect=2e-54]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=163, Expect=2e-40]} {Smed: dd_Smed_v6_10467_0_1, dd_Smed_v6_10467_0_1, [RH, Score=300, Expect=1e-85]} {RNA1509_42466} {RNA1310_4089.1} {RNA815_19162}

Mlig455_054793 {REF} {Length: 3680} {Pfam: Cadherin domain [PF00028.19, score=202.3]; Cadherin-like [PF08266.14, score=33.5]} {Human: ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=252, Expect=3e-68]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=250, Expect=2e-67]; ENSG00000184226, PCDH9, protocadherin 9, [Score=249, Expect=7e-68]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=255, Expect=2e-69]; ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=246, Expect=2e-66]} {Dmel: FBgn0001075, ft, fat, [Score=203, Expect=1e-52]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=159, Expect=4e-39]} {Smed: dd_Smed_v6_10467_0_1, dd_Smed_v6_10467_0_1, [RH, Score=301, Expect=6e-86]} {RNA1509_42466} {RNA1310_4089.1, RNA1509_42466} {RNA1509_42466, RNA815_15304}

Mlig455_054886 {REF} {Length: 3606} {Pfam: Cadherin domain [PF00028.19, score=202.1]; Cadherin-like [PF08266.14, score=33.5]} {Human: ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=251, Expect=1e-67]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=249, Expect=4e-67]; ENSG00000184226, PCDH9, protocadherin 9, [Score=248, Expect=5e-67]; ENSG00000156453, PCDH1, protocadherin 1, [Score=239, Expect=5e-64]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=255, Expect=3e-69]; ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=243, Expect=9e-66]} {Dmel: FBgn0001075, ft, fat, [Score=204, Expect=1e-52]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=159, Expect=5e-39]} {Smed: dd_Smed_v6_10467_0_1, dd_Smed_v6_10467_0_1, [RH, Score=300, Expect=1e-85]} {RNA1509_42466} {RNA1310_4089.1} {RNA815_15304}
30. MligTC455_16329 1019 21.23 Mlig455_007993

Neo: -

Age: -

Region-specific R2: 3.685

Region-enriched R2: 3.576/0.00000
Region-enriched R7: 1.704/0.00652

 0.961 - - - 0.961 - - Mlig455_007993 {REF} {Length: 635} {RNA1509_22236} {RNA1310_84275, RNA1509_22236} {RNA1509_22236, RNA815_43046}
31. MligTC455_29100 53 1.11 Mlig455_022386, Mlig455_022475

Neo: -

Age: -

Region-enriched R2: 7.567/0.00114
Region-enriched R6: 6.070/0.00443

 KREMEN2 0.961 - - - 0.961 - -

Mlig455_022386 {REF} {Length: 4145} {tRNA: Val(CAC),pseudo, score=29.3} {Pfam: WSC domain [PF01822.21, score=45.2]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=48.5, Expect=3e-06]; ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=47.0, Expect=7e-06]} {RNA1509_55375} {RNA1310_18706} {RNA815_23500}

Mlig455_022475 {REF} {Length: 3047} {Pfam: WSC domain [PF01822.21, score=46.0]; PAN domain [PF00024.28, score=23.9]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=51.2, Expect=4e-07]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=53.5, Expect=5e-08]} {RNA1509_47157} {RNA1310_35396.1} {RNA815_23500}
32. MligTC455_44328 858 17.88 Mlig455_026172

Neo: -

Age: Down-Up-Up

Region-specific R2: 4.714

Region-enriched R2: 4.385/0.00000

 0.96 - - - 0.960 - - Mlig455_026172 {REF} {Length: 661} {RNA1509_32102, RNA1509_34635} {RNA1310_60068, RNA1509_32102, RNA1509_34635} {RNA1509_32102, RNA1509_34635, RNA815_37486}
33. MligTC455_44390 1061 22.1 Mlig455_034325

Neo: -

Age: -

Region-specific R2: 4.305

Region-enriched R2: 4.226/0.00000
Region-enriched R3: 3.109/0.00000

 0.959 - - - - - 0.959 Mlig455_034325 {REF} {Length: 1082} {Celegans: WBGene00001446, flp-3, FMRFamide-like neuropeptides 3 SPLGTMRF-amide TPLGTMRF-amide SAEPFGTMRF-amide NPENDTPFGTMRF-amide ASEDALFGTMRF-amide EAEEPLGTMRF-amide SADDSAPFGTMRF-amide NPLGTMRF-amide, [RH, Score=65.1, Expect=2e-13]} {Smed: dd_Smed_v6_1902_0_1, dd_Smed_v6_1902_0_1, [Score=42.0, Expect=9e-06]} {RNA1509_11607} {RNA1310_49918} {RNA815_49783}
34. MligTC455_46173 63 1.3 Mlig455_032091

Neo: Irradiation

Age: Up-Down-Up

 SRR 0.959 - - - 0.959 - - Mlig455_032091 {REF} {Length: 2590} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=208.5]; ACT domain [PF01842.27, score=19.8]} {Human: ENSG00000167720, SRR, serine racemase, [Score=129, Expect=2e-32]} {Mouse: ENSMUSG00000001323, Srr, serine racemase, [Score=105, Expect=4e-24]} {Dmel: FBgn0037684, CG8129, [Score=373, Expect=5e-123]} {Celegans: WBGene00010456, K01C8.1, [Score=407, Expect=5e-136]} {Smed: dd_Smed_v6_6737_0_1, dd_Smed_v6_6737_0_1, [Score=474, Expect=7e-163]} {RNA1509_48789} {RNA1310_15074} {RNA815_9364}
35. MligTC455_41824 194 4.03 Mlig455_048229

Neo: -

Age: -

Region-enriched R2: 3.040/0.03860

 0.958 - - - 0.958 - - Mlig455_048229 {REF} {Length: 769} {RNA1509_49797} {RNA1310_60350, RNA1509_49797} {RNA1509_49797, RNA815_30999}
36. MligTC455_44391 2139 44.56 Mlig455_034381, Mlig455_043867

Neo: -

Age: logFC(26M/2M)=1.551

Region-specific R2: 4.290

Region-enriched R2: 4.082/0.00000
Region-enriched R3: 2.984/0.00000

 0.958 - - - - - 0.958

Mlig455_034381 {REF} {Length: 1311} {Celegans: WBGene00001446, flp-3, FMRFamide-like neuropeptides 3 SPLGTMRF-amide TPLGTMRF-amide SAEPFGTMRF-amide NPENDTPFGTMRF-amide ASEDALFGTMRF-amide EAEEPLGTMRF-amide SADDSAPFGTMRF-amide NPLGTMRF-amide, [RH, Score=67.8, Expect=7e-14]} {Smed: dd_Smed_v6_1902_0_1, dd_Smed_v6_1902_0_1, [Score=42.0, Expect=1e-05]} {RNA1509_11607} {RNA1310_49918} {RNA815_49783}

Mlig455_043867 {REF} {Length: 1251} {Pfam: Anemonia sulcata toxin III family [PF08098.13, score=19.1]} {Celegans: WBGene00001446, flp-3, FMRFamide-like neuropeptides 3 SPLGTMRF-amide TPLGTMRF-amide SAEPFGTMRF-amide NPENDTPFGTMRF-amide ASEDALFGTMRF-amide EAEEPLGTMRF-amide SADDSAPFGTMRF-amide NPLGTMRF-amide, [RH, Score=67.4, Expect=5e-14]} {Smed: dd_Smed_v6_1902_0_1, dd_Smed_v6_1902_0_1, [Score=42.0, Expect=1e-05]} {RNA1509_11607} {RNA1310_49918} {RNA815_49783}
37. MligTC455_47259 985 20.52 Mlig455_024978

Neo: -

Age: -

Region-enriched R2: 2.522/0.00122

 0.956 - - - 0.956 - - Mlig455_024978 {REF} {Length: 514} {RNA1310_63739.2} {RNA815_33907}
38. MligTC455_51764 938 19.55 Mlig455_016061

Neo: -

Age: -

Region-specific R2: 2.881

Region-enriched R2: 1.672/0.00180

 0.956 - - - 0.956 - - Mlig455_016061 {REF} {Length: 649} {RNA1509_58232} {RNA1310_60107.1, RNA1509_58232} {RNA1509_58232, RNA815_31573}
39. MligTC455_21764 52 1.08 Mlig455_031141

Neo: -

Age: -

Region-enriched R2: 7.444/0.02053

 0.955 - - - - - 0.955 Mlig455_031141 {REF} {Length: 3213} {NoTransDecoderORF} {RNA1310_23238} {RNA815_41806}
40. MligTC455_27678 355 7.4 Mlig455_070610

Neo: -

Age: -

Region-specific R2: 4.724

Region-enriched R2: 3.766/0.00062

 0.955 - - - 0.955 - - Mlig455_070610 {REF} {Length: 725} {RNA1509_17468, RNA1509_34237} {RNA1310_59474, RNA1509_17468, RNA1509_34237} {RNA1509_17468, RNA1509_34237, RNA815_28024}
41. MligTC455_44713 661 13.77 Mlig455_048154

Neo: -

Age: logFC(26M/2M)=0.569

Region-specific R2: 3.883

Region-enriched R2: 3.422/0.00000

 0.955 - - - 0.955 - - Mlig455_048154 {REF} {Length: 1173} {RNA1509_34252} {RNA1310_54269.1} {RNA815_55074}
42. MligTC455_44327 94 1.95 Mlig455_026126

Neo: -

Age: Down-Down-Down

Region-enriched R5: 3.905/0.02515

 0.953 - - - 0.953 - - Mlig455_026126 {REF} {Length: 572} {RNA1509_32102} {RNA1310_60068} {RNA815_37486}
43. MligTC455_12607 22 0.46 Mlig455_022861

Neo: -

Age: -

 0.952 - - - 0.952 - - Mlig455_022861 {REF} {Length: 614} {TRANSSPLICED} {RNA1310_92283}
44. MligTC455_25886 17 0.35 Mlig455_028578, Mlig455_056909

Neo: -

Age: -

 IGFALS, VASN 0.952 - - - - - 0.952

Mlig455_028578 {REF} {Length: 2425} {Pfam: Tetraspanin family [PF00335.22, score=98.0]; Leucine rich repeat [PF13855.8, score=91.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=40.8]; Leucine-rich repeat [PF14580.8, score=22.3]} {Human: ENSG00000099769, IGFALS, insulin like growth factor binding protein acid labile subunit, [Score=67.0, Expect=6e-11]} {Mouse: ENSMUSG00000046070, Igfals, insulin-like growth factor binding protein, acid labile subunit, [Score=71.6, Expect=1e-12]} {Dmel: FBgn0029114, Tollo, [Score=69.7, Expect=6e-12]} {Celegans: WBGene00008093, lron-1, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=54.7, Expect=1e-07]} {Smed: dd_Smed_v6_1378_0_1, dd_Smed_v6_1378_0_1, [Score=84.0, Expect=1e-17]} {RNA1509_54214} {RNA1310_24542} {RNA815_8809.1}

Mlig455_056909 {REF} {Length: 3265} {Pfam: Tetraspanin family [PF00335.22, score=91.6]; Leucine rich repeat [PF13855.8, score=91.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=39.5]; Leucine-rich repeat [PF14580.8, score=23.9]} {Human: ENSG00000168140, VASN, vasorin, [Score=71.2, Expect=3e-12]; ENSG00000274334, VASN, vasorin, [Score=71.2, Expect=3e-12]} {Mouse: ENSMUSG00000046070, Igfals, insulin-like growth factor binding protein, acid labile subunit, [Score=69.3, Expect=9e-12]; ENSMUSG00000063765, Chadl, chondroadherin-like, [Score=68.9, Expect=1e-11]; ENSMUSG00000039646, Vasn, vasorin, [Score=68.9, Expect=1e-11]; ENSMUSG00000023176, Cpn2, carboxypeptidase N, polypeptide 2, [Score=67.0, Expect=3e-11]} {Dmel: FBgn0029114, Tollo, [Score=72.4, Expect=1e-12]} {Celegans: WBGene00011345, dma-1, [Score=52.4, Expect=8e-07]} {Smed: dd_Smed_v6_6669_0_1, dd_Smed_v6_6669_0_1, [Score=88.2, Expect=6e-18]} {RNA1509_54214} {RNA1310_15547} {RNA815_8809.1}
45. MligTC455_51123 37 0.77 Mlig455_059507

Neo: -

Age: -

 0.952 - - - 0.952 - - Mlig455_059507 {REF} {Length: 970} {RNA1310_88282}
46. MligTC455_48667 50 1.04 Mlig455_068928

Neo: -

Age: -

Region-enriched R7: 5.208/0.00414

 0.951 - - - - - 0.951 Mlig455_068928 {REF} {Length: 352} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_84084} {RNA815_60984}
47. MligTC455_13503 70 1.46 Mlig455_010582, Mlig455_010601

Neo: -

Age: -

 TRHR 0.95 - - - - - 0.950

Mlig455_010582 {REF} {Length: 2404} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.0]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=53.1, Expect=4e-07]} {Mouse: ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=57.8, Expect=1e-08]} {Dmel: FBgn0029723, Proc-R, Proctolin receptor, [Score=66.2, Expect=2e-11]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=55.1, Expect=4e-08]} {Smed: dd_Smed_v6_25364_0_1, dd_Smed_v6_25364_0_1, [Score=167, Expect=2e-47]} {RNA1310_120532}

Mlig455_010601 {REF} {Length: 2481} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=52.6]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=56.2, Expect=5e-08]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=57.0, Expect=2e-08]; ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=57.0, Expect=2e-08]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=74.3, Expect=6e-14]} {Celegans: WBGene00020069, R13H7.2, [Score=54.7, Expect=6e-08]} {Smed: dd_Smed_v6_13560_0_1, dd_Smed_v6_13560_0_1, [RH, Score=177, Expect=3e-51]} {RNA1310_92274}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA