TomoSeq data search

Data search

Results for MligTC455_21913

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21913	2771	57.74	Mlig455_041262, Mlig455_053075	Neo: - Age: -	NOVA1	Mlig455_041262 {REF} {Length: 5206} {Pfam: KH domain [PF00013.31, score=141.0]; KH domain [PF07650.19, score=44.2]; KH domain [PF13083.8, score=20.9]; KH-like RNA-binding domain [PF16005.7, score=19.9]} {Human: ENSG00000139910, NOVA1, NOVA alternative splicing regulator 1, [RH, Score=237, Expect=2e-71]} {Mouse: ENSMUSG00000021047, Nova1, neuro-oncological ventral antigen 1, [RH, Score=224, Expect=3e-66]} {Dmel: FBgn0261552, ps, pasilla, [RH, Score=290, Expect=5e-91]} {Celegans: WBGene00013347, nova-1, NOVA kh (KH) homology domain homolog, [RH, Score=133, Expect=5e-34]} {Smed: dd_Smed_v6_5632_0_1, dd_Smed_v6_5632_0_1, [RH, Score=317, Expect=1e-100]} {RNA1509_10378, RNA1509_18950, RNA1509_23652, RNA1509_26658, RNA1509_37526, RNA1509_4143} {RNA1310_11244, RNA1509_10378, RNA1509_18950, RNA1509_23652, RNA1509_26658, RNA1509_37526, RNA1509_4143} {RNA1509_10378, RNA1509_18950, RNA1509_23652, RNA1509_26658, RNA1509_37526, RNA1509_4143, RNA815_9593.1} Mlig455_053075 {REF} {Length: 4209} {Pfam: KH domain [PF00013.31, score=138.8]; KH domain [PF07650.19, score=44.2]; KH domain [PF13083.8, score=20.6]; KH-like RNA-binding domain [PF16005.7, score=20.0]} {Human: ENSG00000139910, NOVA1, NOVA alternative splicing regulator 1, [RH, Score=236, Expect=2e-71]} {Mouse: ENSMUSG00000021047, Nova1, neuro-oncological ventral antigen 1, [RH, Score=223, Expect=3e-66]} {Dmel: FBgn0261552, ps, pasilla, [RH, Score=284, Expect=8e-89]} {Celegans: WBGene00013347, nova-1, NOVA kh (KH) homology domain homolog, [RH, Score=133, Expect=4e-34]} {Smed: dd_Smed_v6_5632_0_1, dd_Smed_v6_5632_0_1, [Score=315, Expect=4e-100]} {RNA1509_4143} {RNA1310_11244} {RNA815_9593.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21913

2771

57.74

Mlig455_041262, Mlig455_053075

Neo: -

Age: -

NOVA1

Mlig455_041262 {REF} {Length: 5206} {Pfam: KH domain [PF00013.31, score=141.0]; KH domain [PF07650.19, score=44.2]; KH domain [PF13083.8, score=20.9]; KH-like RNA-binding domain [PF16005.7, score=19.9]} {Human: ENSG00000139910, NOVA1, NOVA alternative splicing regulator 1, [RH, Score=237, Expect=2e-71]} {Mouse: ENSMUSG00000021047, Nova1, neuro-oncological ventral antigen 1, [RH, Score=224, Expect=3e-66]} {Dmel: FBgn0261552, ps, pasilla, [RH, Score=290, Expect=5e-91]} {Celegans: WBGene00013347, nova-1, NOVA kh (KH) homology domain homolog, [RH, Score=133, Expect=5e-34]} {Smed: dd_Smed_v6_5632_0_1, dd_Smed_v6_5632_0_1, [RH, Score=317, Expect=1e-100]} {RNA1509_10378, RNA1509_18950, RNA1509_23652, RNA1509_26658, RNA1509_37526, RNA1509_4143} {RNA1310_11244, RNA1509_10378, RNA1509_18950, RNA1509_23652, RNA1509_26658, RNA1509_37526, RNA1509_4143} {RNA1509_10378, RNA1509_18950, RNA1509_23652, RNA1509_26658, RNA1509_37526, RNA1509_4143, RNA815_9593.1}

Mlig455_053075 {REF} {Length: 4209} {Pfam: KH domain [PF00013.31, score=138.8]; KH domain [PF07650.19, score=44.2]; KH domain [PF13083.8, score=20.6]; KH-like RNA-binding domain [PF16005.7, score=20.0]} {Human: ENSG00000139910, NOVA1, NOVA alternative splicing regulator 1, [RH, Score=236, Expect=2e-71]} {Mouse: ENSMUSG00000021047, Nova1, neuro-oncological ventral antigen 1, [RH, Score=223, Expect=3e-66]} {Dmel: FBgn0261552, ps, pasilla, [RH, Score=284, Expect=8e-89]} {Celegans: WBGene00013347, nova-1, NOVA kh (KH) homology domain homolog, [RH, Score=133, Expect=4e-34]} {Smed: dd_Smed_v6_5632_0_1, dd_Smed_v6_5632_0_1, [Score=315, Expect=4e-100]} {RNA1509_4143} {RNA1310_11244} {RNA815_9593.1}

Cumulative graph for MligTC455_21913

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.343	5.991	0.60426	1.00000
RegionR2	-0.054	5.991	0.87174	1.00000
RegionR3	0.15	5.991	0.58975	1.00000
RegionR4	0.869	5.991	0.00960	0.05921
RegionR5	0.373	5.991	0.15366	0.40977
RegionR6	0.157	5.991	0.57313	1.00000
RegionR7	-0.656	5.991	0.05212	0.43924
RegionR8	-0.496	5.991	0.20032	0.79789

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.314	5.991	0.22327	0.95604
RegenerationR2	-0.059	5.991	0.85257	1.00000
RegenerationR3	-0.422	5.991	0.21432	0.65076
RegenerationR4	-0.404	5.991	0.25618	0.70428
RegenerationR5	-0.475	5.991	0.15193	0.57070
RegenerationR6	-0.125	5.991	0.71222	0.93093
RegenerationBL	0.024	5.991	0.94289	1.00000
RegenerationTP	-0.173	5.991	0.65696	0.99219

Genes with expression patterns similar to MligTC455_21913

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21913	2771	57.74	Mlig455_041262, Mlig455_053075	Neo: - Age: -	NOVA1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_041262 {REF} {Length: 5206} {Pfam: KH domain [PF00013.31, score=141.0]; KH domain [PF07650.19, score=44.2]; KH domain [PF13083.8, score=20.9]; KH-like RNA-binding domain [PF16005.7, score=19.9]} {Human: ENSG00000139910, NOVA1, NOVA alternative splicing regulator 1, [RH, Score=237, Expect=2e-71]} {Mouse: ENSMUSG00000021047, Nova1, neuro-oncological ventral antigen 1, [RH, Score=224, Expect=3e-66]} {Dmel: FBgn0261552, ps, pasilla, [RH, Score=290, Expect=5e-91]} {Celegans: WBGene00013347, nova-1, NOVA kh (KH) homology domain homolog, [RH, Score=133, Expect=5e-34]} {Smed: dd_Smed_v6_5632_0_1, dd_Smed_v6_5632_0_1, [RH, Score=317, Expect=1e-100]} {RNA1509_10378, RNA1509_18950, RNA1509_23652, RNA1509_26658, RNA1509_37526, RNA1509_4143} {RNA1310_11244, RNA1509_10378, RNA1509_18950, RNA1509_23652, RNA1509_26658, RNA1509_37526, RNA1509_4143} {RNA1509_10378, RNA1509_18950, RNA1509_23652, RNA1509_26658, RNA1509_37526, RNA1509_4143, RNA815_9593.1} Mlig455_053075 {REF} {Length: 4209} {Pfam: KH domain [PF00013.31, score=138.8]; KH domain [PF07650.19, score=44.2]; KH domain [PF13083.8, score=20.6]; KH-like RNA-binding domain [PF16005.7, score=20.0]} {Human: ENSG00000139910, NOVA1, NOVA alternative splicing regulator 1, [RH, Score=236, Expect=2e-71]} {Mouse: ENSMUSG00000021047, Nova1, neuro-oncological ventral antigen 1, [RH, Score=223, Expect=3e-66]} {Dmel: FBgn0261552, ps, pasilla, [RH, Score=284, Expect=8e-89]} {Celegans: WBGene00013347, nova-1, NOVA kh (KH) homology domain homolog, [RH, Score=133, Expect=4e-34]} {Smed: dd_Smed_v6_5632_0_1, dd_Smed_v6_5632_0_1, [Score=315, Expect=4e-100]} {RNA1509_4143} {RNA1310_11244} {RNA815_9593.1}
2.	MligTC455_33620	651	13.55	Mlig455_053546	Neo: - Age: -	SCML2	0.959	-	-	0.959	-	-	-	Mlig455_053546 {REF} {Length: 3040} {TRANSSPLICED} {Pfam: mbt repeat [PF02820.20, score=135.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=46.2]; SLED domain [PF12140.10, score=42.9]; SAM domain (Sterile alpha motif) [PF07647.19, score=34.6]; Sterile alpha motif (SAM)/Pointed domain [PF02198.18, score=23.7]} {Human: ENSG00000102098, SCML2, Scm polycomb group protein like 2, [RH, Score=290, Expect=5e-87]; ENSG00000010803, SCMH1, Scm polycomb group protein homolog 1, [RH, Score=287, Expect=2e-86]} {Mouse: ENSMUSG00000000085, Scmh1, sex comb on midleg homolog 1, [RH, Score=341, Expect=9e-107]} {Dmel: FBgn0003334, Scm, Sex comb on midleg, [RH, Score=256, Expect=2e-73]} {Celegans: WBGene00003041, lin-61, [RH, Score=90.1, Expect=1e-18]} {Smed: dd_Smed_v6_10208_0_2, dd_Smed_v6_10208_0_2, [RH, Score=173, Expect=4e-46]} {RNA1509_42002} {RNA1310_6155} {RNA815_20518}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_21913

2771

57.74

Mlig455_041262, Mlig455_053075

Neo: -

Age: -

NOVA1

1.000

MligTC455_33620

651

13.55

Mlig455_053546

Neo: -

Age: -

SCML2

0.959

Mlig455_053546 {REF} {Length: 3040} {TRANSSPLICED} {Pfam: mbt repeat [PF02820.20, score=135.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=46.2]; SLED domain [PF12140.10, score=42.9]; SAM domain (Sterile alpha motif) [PF07647.19, score=34.6]; Sterile alpha motif (SAM)/Pointed domain [PF02198.18, score=23.7]} {Human: ENSG00000102098, SCML2, Scm polycomb group protein like 2, [RH, Score=290, Expect=5e-87]; ENSG00000010803, SCMH1, Scm polycomb group protein homolog 1, [RH, Score=287, Expect=2e-86]} {Mouse: ENSMUSG00000000085, Scmh1, sex comb on midleg homolog 1, [RH, Score=341, Expect=9e-107]} {Dmel: FBgn0003334, Scm, Sex comb on midleg, [RH, Score=256, Expect=2e-73]} {Celegans: WBGene00003041, lin-61, [RH, Score=90.1, Expect=1e-18]} {Smed: dd_Smed_v6_10208_0_2, dd_Smed_v6_10208_0_2, [RH, Score=173, Expect=4e-46]} {RNA1509_42002} {RNA1310_6155} {RNA815_20518}