Data search
Results for MligTC455_21921
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21921 | 274 | 5.71 | Mlig455_051476 | Neo: - Age: - Region-enriched R2: 2.454/0.02341 |
GRIK3 | Mlig455_051476 {REF} {Length: 4017} {Pfam: Ligand-gated ion channel [PF00060.28, score=178.0]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=134.9]; Receptor family ligand binding region [PF01094.30, score=89.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=70.1]; Periplasmic binding protein [PF13458.8, score=19.4]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=606, Expect=0.0]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=605, Expect=0.0]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=584, Expect=0.0]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=610, Expect=0.0]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=604, Expect=0.0]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=589, Expect=0.0]} {Dmel: FBgn0038837, CG3822, [RH, Score=648, Expect=0.0]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=455, Expect=5e-146]} {Smed: dd_Smed_v6_4267_0_7, dd_Smed_v6_4267_0_7, [RH, Score=642, Expect=0.0]} {RNA1509_12744, RNA1509_44431, RNA1509_57402} {RNA1310_4145.2, RNA1509_12744, RNA1509_44431, RNA1509_57402} {RNA1509_12744, RNA1509_44431, RNA1509_57402, RNA815_1968.1} |
Cumulative graph for MligTC455_21921
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.075 | 3.055 | 0.12996 | 0.72758 | |
| RegionR2 | 2.454 | 3.055 | 0.00110 | 0.02341 | |
| RegionR3 | 0.487 | 3.055 | 0.58536 | 1.00000 | |
| RegionR4 | -0.631 | 3.055 | 0.96719 | 1.00000 | |
| RegionR5 | -0.854 | 3.055 | 0.98146 | 1.00000 | |
| RegionR6 | 0.934 | 3.055 | 0.25750 | 0.84394 | |
| RegionR7 | 1.672 | 3.055 | 0.06948 | 0.50593 | |
| RegionR8 | 2.013 | 3.055 | 0.06901 | 0.50407 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.873 | 3.055 | 0.23035 | 0.96044 | |
| RegenerationR2 | -0.255 | 3.055 | 0.52829 | 0.88322 | |
| RegenerationR3 | 0.962 | 3.055 | 0.07225 | 0.44956 | |
| RegenerationR4 | 0.25 | 3.055 | 0.66155 | 0.93856 | |
| RegenerationR5 | 0.333 | 3.055 | 0.54504 | 0.88295 | |
| RegenerationR6 | -0.419 | 3.055 | 0.44390 | 0.76662 | |
| RegenerationBL | -1.687 | 3.055 | 0.03877 | 0.22322 | |
| RegenerationTP | -0.171 | 3.055 | 0.80142 | 1.00000 |
Genes with expression patterns similar to MligTC455_21921
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21921 | 274 | 5.71 | Mlig455_051476 | Neo: - Age: - Region-enriched R2: 2.454/0.02341 |
GRIK3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051476 {REF} {Length: 4017} {Pfam: Ligand-gated ion channel [PF00060.28, score=178.0]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=134.9]; Receptor family ligand binding region [PF01094.30, score=89.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=70.1]; Periplasmic binding protein [PF13458.8, score=19.4]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=606, Expect=0.0]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=605, Expect=0.0]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=584, Expect=0.0]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=610, Expect=0.0]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=604, Expect=0.0]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=589, Expect=0.0]} {Dmel: FBgn0038837, CG3822, [RH, Score=648, Expect=0.0]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=455, Expect=5e-146]} {Smed: dd_Smed_v6_4267_0_7, dd_Smed_v6_4267_0_7, [RH, Score=642, Expect=0.0]} {RNA1509_12744, RNA1509_44431, RNA1509_57402} {RNA1310_4145.2, RNA1509_12744, RNA1509_44431, RNA1509_57402} {RNA1509_12744, RNA1509_44431, RNA1509_57402, RNA815_1968.1} |
| 2. | MligTC455_47741 | 102 | 2.13 | Mlig455_004211 | Neo: - Age: Down-Up-Up |
3.356 | - | - | 0.797 | 0.961 | 0.854 | 0.744 | Mlig455_004211 {REF} {Length: 1794} {RNA1310_23101} {RNA815_45601} | |
| 3. | MligTC455_34258 | 536 | 11.17 | Mlig455_039100 | Neo: - Age: Up-Down-Down |
UNC80 | 2.467 | - | - | - | 0.953 | 0.804 | 0.710 | Mlig455_039100 {REF} {Length: 6695} {Pfam: Protein UNC80 [PF19424.1, score=644.7]} {Human: ENSG00000144406, UNC80, unc-80 homolog, NALCN channel complex subunit, [Score=622, Expect=0.0]} {Mouse: ENSMUSG00000055567, Unc80, unc-80, NALCN activator, [Score=619, Expect=0.0]} {Dmel: FBgn0039536, unc80, uncoordinated 80, [Score=642, Expect=0.0]} {Celegans: WBGene00006812, unc-80, [Score=620, Expect=0.0]} {Smed: dd_Smed_v6_5118_0_1, dd_Smed_v6_5118_0_1, [Score=854, Expect=0.0]} {RNA1509_23382} {RNA1310_463.1} {RNA815_194.1} |
| 4. | MligTC455_46418 | 178 | 3.71 | Mlig455_056428 | Neo: - Age: - |
1.809 | - | - | - | 0.968 | 0.841 | - | Mlig455_056428 {REF} {Length: 3626} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=49.8]} {RNA1509_14623} {RNA1310_25579, RNA1509_14623} {RNA1509_14623, RNA815_35028} | |
| 5. | MligTC455_21668 | 84 | 1.74 | Mlig455_024837 | Neo: - |
PPP3R1 | 1.723 | - | - | - | 0.955 | 0.768 | - | Mlig455_024837 {REF} {Length: 1650} {Pfam: EF hand [PF00036.34, score=92.6]; EF-hand domain pair [PF13499.8, score=86.6]; EF-hand domain [PF13405.8, score=74.3]; EF hand [PF13202.8, score=72.6]; EF-hand domain pair [PF13833.8, score=65.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=30.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=27.0]; EF-hand domain [PF14658.8, score=21.7]} {Human: ENSG00000221823, PPP3R1, protein phosphatase 3 regulatory subunit B, alpha, [RH, Score=289, Expect=5e-101]} {Mouse: ENSMUSG00000033953, Ppp3r1, protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I), [RH, Score=289, Expect=3e-101]} {Dmel: FBgn0010014, CanB, Calcineurin B, [RH, Score=282, Expect=1e-98]} {Celegans: WBGene00000554, cnb-1, Protein phosphatase 2B regulatory subunit cnb-1, [RH, Score=272, Expect=7e-95]} {Smed: dd_Smed_v6_5589_0_1, dd_Smed_v6_5589_0_1, [RH, Score=281, Expect=1e-98]} {RNA1509_14613} {RNA1310_16848.1} {RNA815_6272} |
| 6. | MligTC455_15735 | 214 | 4.45 | Mlig455_053725 | Neo: - Age: Up-Down-Up |
NAA30 | 0.961 | - | - | 0.961 | - | - | - | Mlig455_053725 {REF} {Length: 719} {TRANSSPLICED} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=67.0]; Acetyltransferase (GNAT) domain [PF13508.9, score=43.9]; Acetyltransferase (GNAT) domain [PF13673.9, score=36.8]; FR47-like protein [PF08445.12, score=33.5]; Acetyltransferase (GNAT) domain [PF13523.8, score=26.3]} {Human: ENSG00000139977, NAA30, N(alpha)-acetyltransferase 30, NatC catalytic subunit, [RH, Score=195, Expect=1e-61]} {Mouse: ENSMUSG00000036282, Naa30, N(alpha)-acetyltransferase 30, NatC catalytic subunit, [RH, Score=198, Expect=4e-63]} {Dmel: FBgn0024362, Naa30A, N(alpha)-acetyltransferase 30 A, [RH, Score=166, Expect=1e-50]} {Celegans: WBGene00015074, natc-2, N-alpha-AcetylTransferase C complex subunit, [RH, Score=173, Expect=2e-54]} {Smed: dd_Smed_v6_8724_0_1, dd_Smed_v6_8724_0_1, [RH, Score=201, Expect=1e-65]} {RNA1509_23974} {RNA1310_47162} {RNA815_24882} |
| 7. | MligTC455_47851 | 36 | 0.76 | Mlig455_047832 | Neo: - Age: - |
PACRGL | 0.957 | - | - | - | - | 0.957 | - | Mlig455_047832 {REF} {Length: 1939} {Pfam: Parkin co-regulated protein [PF10274.11, score=119.9]} {Human: ENSG00000163138, PACRGL, parkin coregulated like, [RH, Score=167, Expect=1e-51]} {Mouse: ENSMUSG00000029089, 5730480H06Rik, RIKEN cDNA 5730480H06 gene, [RH, Score=152, Expect=1e-45]} {Dmel: FBgn0034454, CG15120, [Score=62.0, Expect=2e-11]} {RNA1310_58381} |
| 8. | MligTC455_43191 | 1655 | 34.47 | Mlig455_016868, Mlig455_016872 | Neo: - Age: logFC(26M/2M)=0.657 Region-enriched R3: 1.109/0.00086 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_016868 {REF} {Length: 1193} {RNA1509_38068} {RNA1310_40200, RNA1509_38068} {RNA1509_38068, RNA815_19109.1} Mlig455_016872 {REF} {Length: 1107} {TRANSSPLICED} {RNA1509_28597, RNA1509_38068, RNA1509_38649} {RNA1310_40200, RNA1509_28597, RNA1509_38649} {RNA1509_28597, RNA1509_38649, RNA815_19109.1} |
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