TomoSeq data search

Data search

Results for MligTC455_21986

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21986

2579

53.74

Mlig455_020139

Neo: -

Age: logFC(26M/2M)=0.343

ACTN1

Mlig455_020139 {REF} {Length: 4866} {Pfam: Spectrin repeat [PF00435.23, score=123.0]; Ca2+ insensitive EF hand [PF08726.12, score=86.5]; EF hand [PF00036.34, score=31.2]; EF-hand domain [PF13405.8, score=23.5]; EF-hand domain pair [PF13499.8, score=21.4]} {Human: ENSG00000072110, ACTN1, actinin alpha 1, [Score=541, Expect=0.0]; ENSG00000282844, ACTN4, actinin alpha 4, [Score=538, Expect=0.0]; ENSG00000130402, ACTN4, actinin alpha 4, [Score=538, Expect=0.0]; ENSG00000077522, ACTN2, actinin alpha 2, [Score=535, Expect=0.0]} {Mouse: ENSMUSG00000052374, Actn2, actinin alpha 2, [Score=538, Expect=0.0]; ENSMUSG00000015143, Actn1, actinin, alpha 1, [Score=538, Expect=0.0]; ENSMUSG00000054808, Actn4, actinin alpha 4, [Score=532, Expect=0.0]; ENSMUSG00000006457, Actn3, actinin alpha 3, [Score=513, Expect=1e-173]} {Dmel: FBgn0000667, Actn, alpha actinin, [Score=587, Expect=0.0]} {Celegans: WBGene00000228, atn-1, AcTiniN, [Score=501, Expect=1e-170]} {Smed: dd_Smed_v6_5647_0_1, dd_Smed_v6_5647_0_1, [Score=491, Expect=2e-167]} {RNA1509_26673} {RNA1310_1661} {RNA815_458.1}

Cumulative graph for MligTC455_21986

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.111	5.928	0.86041	1.00000
RegionR2	-0.283	5.928	0.33628	0.72788
RegionR3	-0.069	5.928	0.76993	1.00000
RegionR4	0.885	5.928	0.00170	0.01576
RegionR5	-0.292	5.928	0.20660	0.50049
RegionR6	0.092	5.928	0.70262	1.00000
RegionR7	-0.039	5.928	0.89227	1.00000
RegionR8	-0.183	5.928	0.61072	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.866	5.928	0.09181	0.80142
RegenerationR2	0.067	5.928	0.79570	0.98823
RegenerationR3	0.031	5.928	0.91361	1.00000
RegenerationR4	-0.536	5.928	0.06514	0.40768
RegenerationR5	0.005	5.928	0.98460	1.00000
RegenerationR6	-0.159	5.928	0.57384	0.85401
RegenerationBL	0.076	5.928	0.79990	1.00000
RegenerationTP	-0.613	5.928	0.08036	0.45083

Genes with expression patterns similar to MligTC455_21986

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21986	2579	53.74	Mlig455_020139	Neo: - Age: logFC(26M/2M)=0.343	ACTN1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020139 {REF} {Length: 4866} {Pfam: Spectrin repeat [PF00435.23, score=123.0]; Ca2+ insensitive EF hand [PF08726.12, score=86.5]; EF hand [PF00036.34, score=31.2]; EF-hand domain [PF13405.8, score=23.5]; EF-hand domain pair [PF13499.8, score=21.4]} {Human: ENSG00000072110, ACTN1, actinin alpha 1, [Score=541, Expect=0.0]; ENSG00000282844, ACTN4, actinin alpha 4, [Score=538, Expect=0.0]; ENSG00000130402, ACTN4, actinin alpha 4, [Score=538, Expect=0.0]; ENSG00000077522, ACTN2, actinin alpha 2, [Score=535, Expect=0.0]} {Mouse: ENSMUSG00000052374, Actn2, actinin alpha 2, [Score=538, Expect=0.0]; ENSMUSG00000015143, Actn1, actinin, alpha 1, [Score=538, Expect=0.0]; ENSMUSG00000054808, Actn4, actinin alpha 4, [Score=532, Expect=0.0]; ENSMUSG00000006457, Actn3, actinin alpha 3, [Score=513, Expect=1e-173]} {Dmel: FBgn0000667, Actn, alpha actinin, [Score=587, Expect=0.0]} {Celegans: WBGene00000228, atn-1, AcTiniN, [Score=501, Expect=1e-170]} {Smed: dd_Smed_v6_5647_0_1, dd_Smed_v6_5647_0_1, [Score=491, Expect=2e-167]} {RNA1509_26673} {RNA1310_1661} {RNA815_458.1}
2.	MligTC455_21987	2823	58.82	Mlig455_045026	Neo: - Age: -	ACTN2	5.79	0.962	0.975	0.900	0.983	0.984	0.986	Mlig455_045026 {REF} {Length: 4890} {Pfam: Calponin homology (CH) domain [PF00307.33, score=204.9]; Spectrin repeat [PF00435.23, score=164.3]; Ca2+ insensitive EF hand [PF08726.12, score=84.4]; CAMSAP CH domain [PF11971.10, score=59.5]; EF hand [PF00036.34, score=29.1]; EF-hand domain [PF13405.8, score=21.5]; EF-hand domain pair [PF13499.8, score=19.9]} {Human: ENSG00000077522, ACTN2, actinin alpha 2, [Score=1076, Expect=0.0]; ENSG00000130402, ACTN4, actinin alpha 4, [Score=1058, Expect=0.0]; ENSG00000282844, ACTN4, actinin alpha 4, [Score=1058, Expect=0.0]; ENSG00000248746, ACTN3, actinin alpha 3 (gene/pseudogene), [Score=1033, Expect=0.0]} {Mouse: ENSMUSG00000052374, Actn2, actinin alpha 2, [Score=1082, Expect=0.0]; ENSMUSG00000054808, Actn4, actinin alpha 4, [Score=1053, Expect=0.0]; ENSMUSG00000006457, Actn3, actinin alpha 3, [Score=1051, Expect=0.0]} {Dmel: FBgn0000667, Actn, alpha actinin, [Score=1113, Expect=0.0]} {Celegans: WBGene00000228, atn-1, AcTiniN, [Score=1030, Expect=0.0]} {Smed: dd_Smed_v6_1951_0_1, dd_Smed_v6_1951_0_1, [Score=940, Expect=0.0]} {RNA1509_1337} {RNA1310_1154} {RNA815_458.1}
3.	MligTC455_32850	737	15.36	Mlig455_026517	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_026517 {REF} {Length: 2652} {Pfam: Plectin repeat [PF00681.22, score=24.6]} {RNA1509_45383, RNA1509_45883} {RNA1310_7758.2, RNA1509_45383} {RNA1509_45383, RNA815_9451}
4.	MligTC455_52371	366	7.63	Mlig455_058035	Neo: - Age: -	ACBD3	0.969	-	-	-	-	0.969	-	Mlig455_058035 {REF} {Length: 2844} {TRANSSPLICED} {Pfam: Golgi-dynamics membrane-trafficking [PF13897.8, score=93.0]} {Human: ENSG00000182827, ACBD3, acyl-CoA binding domain containing 3, [Score=96.7, Expect=3e-22]} {Mouse: ENSMUSG00000026499, Acbd3, acyl-Coenzyme A binding domain containing 3, [Score=93.6, Expect=2e-21]} {Dmel: FBgn0031061, CG14232, [Score=98.6, Expect=3e-23]} {Celegans: WBGene00012765, Y41E3.7, [Score=122, Expect=5e-34]} {Smed: dd_Smed_v6_2498_0_1, dd_Smed_v6_2498_0_1, [Score=142, Expect=6e-41]} {RNA1509_14041} {RNA1310_22568} {RNA815_7615}
5.	MligTC455_30045	1464	30.5	Mlig455_067017, Mlig455_067057	Neo: - Age: -	UXS1	0.954	-	-	-	-	0.954	-	Mlig455_067017 {REF} {Length: 2328} {TRANSSPLICED} {Pfam: GDP-mannose 4,6 dehydratase [PF16363.7, score=198.3]; NAD dependent epimerase/dehydratase family [PF01370.23, score=168.4]; RmlD substrate binding domain [PF04321.19, score=40.6]; Male sterility protein [PF07993.14, score=39.1]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=32.7]; Polysaccharide biosynthesis protein [PF02719.17, score=31.5]} {Human: ENSG00000115652, UXS1, UDP-glucuronate decarboxylase 1, [RH, Score=499, Expect=2e-176]} {Mouse: ENSMUSG00000057363, Uxs1, UDP-glucuronate decarboxylase 1, [RH, Score=499, Expect=1e-176]} {Dmel: FBgn0035848, Uxs, UDP-xylose synthase, [RH, Score=483, Expect=6e-170]} {Celegans: WBGene00005019, sqv-1, SQuashed Vulva; UDP-glucuronic acid decarboxylase, [RH, Score=467, Expect=2e-163]} {Smed: dd_Smed_v6_8645_0_1, dd_Smed_v6_8645_0_1, [RH, Score=419, Expect=7e-146]} {RNA1509_12952, RNA1509_37901} {RNA1310_12806, RNA1509_12952, RNA1509_37901} {RNA1509_12952, RNA1509_37901, RNA815_9237} Mlig455_067057 {REF} {Length: 2297} {TRANSSPLICED} {Pfam: GDP-mannose 4,6 dehydratase [PF16363.7, score=198.3]; NAD dependent epimerase/dehydratase family [PF01370.23, score=168.7]; RmlD substrate binding domain [PF04321.19, score=40.8]; Male sterility protein [PF07993.14, score=39.2]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=31.3]; Polysaccharide biosynthesis protein [PF02719.17, score=31.3]} {Human: ENSG00000115652, UXS1, UDP-glucuronate decarboxylase 1, [RH, Score=499, Expect=2e-176]} {Mouse: ENSMUSG00000057363, Uxs1, UDP-glucuronate decarboxylase 1, [RH, Score=499, Expect=1e-176]} {Dmel: FBgn0035848, Uxs, UDP-xylose synthase, [RH, Score=483, Expect=7e-170]} {Celegans: WBGene00005019, sqv-1, SQuashed Vulva; UDP-glucuronic acid decarboxylase, [RH, Score=467, Expect=2e-163]} {Smed: dd_Smed_v6_8645_0_1, dd_Smed_v6_8645_0_1, [RH, Score=419, Expect=7e-146]} {RNA1509_12952} {RNA1310_12806} {RNA815_9237}
6.	MligTC455_25482	2587	53.89	Mlig455_028554, Mlig455_064743	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.504	SLC25A36	0.951	-	-	-	-	0.951	-	Mlig455_028554 {REF} {Length: 2847} {Pfam: Mitochondrial carrier protein [PF00153.29, score=195.1]} {Human: ENSG00000114120, SLC25A36, solute carrier family 25 member 36, [RH, Score=261, Expect=6e-85]} {Mouse: ENSMUSG00000032449, Slc25a36, solute carrier family 25, member 36, [RH, Score=258, Expect=3e-84]} {Dmel: FBgn0031359, Rim2, Replication in mitochondria 2, [RH, Score=254, Expect=3e-82]} {Celegans: WBGene00011662, T09F3.2, Carrier protein (C2), [RH, Score=163, Expect=7e-47]} {Smed: dd_Smed_v6_8768_0_1, dd_Smed_v6_8768_0_1, [RH, Score=256, Expect=2e-83]} {RNA1509_3960} {RNA1310_11164.1} {RNA815_2325.1} Mlig455_064743 {REF} {Length: 3677} {Pfam: Mitochondrial carrier protein [PF00153.29, score=194.5]; Mitochondrial SLC25 homolog [PF18405.3, score=17.7]} {Human: ENSG00000114120, SLC25A36, solute carrier family 25 member 36, [RH, Score=261, Expect=6e-85]} {Mouse: ENSMUSG00000032449, Slc25a36, solute carrier family 25, member 36, [RH, Score=258, Expect=3e-84]} {Dmel: FBgn0031359, Rim2, Replication in mitochondria 2, [RH, Score=255, Expect=2e-82]} {Celegans: WBGene00011662, T09F3.2, Carrier protein (C2), [RH, Score=161, Expect=6e-46]} {Smed: dd_Smed_v6_8768_0_1, dd_Smed_v6_8768_0_1, [RH, Score=257, Expect=1e-83]} {RNA1509_3960} {RNA1310_11164.1, RNA1509_3960} {RNA1509_3960, RNA815_2325.1}
7.	MligTC455_51534	1205	25.1	Mlig455_056636	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_056636 {REF} {Length: 3390} {TRANSSPLICED} {RNA1509_19738, RNA1509_24799, RNA1509_43268, RNA1509_47767, RNA1509_47941, RNA1509_50043} {RNA1310_480.1, RNA1509_19738, RNA1509_24799, RNA1509_43268, RNA1509_47767, RNA1509_47941, RNA1509_50043} {RNA1509_19738, RNA1509_24799, RNA1509_43268, RNA1509_47767, RNA1509_47941, RNA1509_50043, RNA815_1360.1}

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