TomoSeq data search

Data search

Results for MligTC455_21987

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21987

2823

58.82

Mlig455_045026

Neo: -

Age: -

ACTN2

Mlig455_045026 {REF} {Length: 4890} {Pfam: Calponin homology (CH) domain [PF00307.33, score=204.9]; Spectrin repeat [PF00435.23, score=164.3]; Ca2+ insensitive EF hand [PF08726.12, score=84.4]; CAMSAP CH domain [PF11971.10, score=59.5]; EF hand [PF00036.34, score=29.1]; EF-hand domain [PF13405.8, score=21.5]; EF-hand domain pair [PF13499.8, score=19.9]} {Human: ENSG00000077522, ACTN2, actinin alpha 2, [Score=1076, Expect=0.0]; ENSG00000130402, ACTN4, actinin alpha 4, [Score=1058, Expect=0.0]; ENSG00000282844, ACTN4, actinin alpha 4, [Score=1058, Expect=0.0]; ENSG00000248746, ACTN3, actinin alpha 3 (gene/pseudogene), [Score=1033, Expect=0.0]} {Mouse: ENSMUSG00000052374, Actn2, actinin alpha 2, [Score=1082, Expect=0.0]; ENSMUSG00000054808, Actn4, actinin alpha 4, [Score=1053, Expect=0.0]; ENSMUSG00000006457, Actn3, actinin alpha 3, [Score=1051, Expect=0.0]} {Dmel: FBgn0000667, Actn, alpha actinin, [Score=1113, Expect=0.0]} {Celegans: WBGene00000228, atn-1, AcTiniN, [Score=1030, Expect=0.0]} {Smed: dd_Smed_v6_1951_0_1, dd_Smed_v6_1951_0_1, [Score=940, Expect=0.0]} {RNA1509_1337} {RNA1310_1154} {RNA815_458.1}

Cumulative graph for MligTC455_21987

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.369	6.046	0.49569	1.00000
RegionR2	-0.379	6.046	0.14644	0.47728
RegionR3	-0.169	6.046	0.42295	0.94550
RegionR4	0.801	6.046	0.00152	0.01439
RegionR5	-0.373	6.046	0.06805	0.23329
RegionR6	0.054	6.046	0.79983	1.00000
RegionR7	-0.185	6.046	0.48311	1.00000
RegionR8	-0.118	6.046	0.71214	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.45	6.046	0.01423	0.50403
RegenerationR2	0.118	6.046	0.61002	0.91974
RegenerationR3	0.08	6.046	0.75020	0.96501
RegenerationR4	-0.49	6.046	0.05839	0.38788
RegenerationR5	0.038	6.046	0.87678	1.00000
RegenerationR6	-0.312	6.046	0.21972	0.56361
RegenerationBL	-0.011	6.046	0.96789	1.00000
RegenerationTP	-0.533	6.046	0.09185	0.47638

Genes with expression patterns similar to MligTC455_21987

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21987	2823	58.82	Mlig455_045026	Neo: - Age: -	ACTN2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_045026 {REF} {Length: 4890} {Pfam: Calponin homology (CH) domain [PF00307.33, score=204.9]; Spectrin repeat [PF00435.23, score=164.3]; Ca2+ insensitive EF hand [PF08726.12, score=84.4]; CAMSAP CH domain [PF11971.10, score=59.5]; EF hand [PF00036.34, score=29.1]; EF-hand domain [PF13405.8, score=21.5]; EF-hand domain pair [PF13499.8, score=19.9]} {Human: ENSG00000077522, ACTN2, actinin alpha 2, [Score=1076, Expect=0.0]; ENSG00000130402, ACTN4, actinin alpha 4, [Score=1058, Expect=0.0]; ENSG00000282844, ACTN4, actinin alpha 4, [Score=1058, Expect=0.0]; ENSG00000248746, ACTN3, actinin alpha 3 (gene/pseudogene), [Score=1033, Expect=0.0]} {Mouse: ENSMUSG00000052374, Actn2, actinin alpha 2, [Score=1082, Expect=0.0]; ENSMUSG00000054808, Actn4, actinin alpha 4, [Score=1053, Expect=0.0]; ENSMUSG00000006457, Actn3, actinin alpha 3, [Score=1051, Expect=0.0]} {Dmel: FBgn0000667, Actn, alpha actinin, [Score=1113, Expect=0.0]} {Celegans: WBGene00000228, atn-1, AcTiniN, [Score=1030, Expect=0.0]} {Smed: dd_Smed_v6_1951_0_1, dd_Smed_v6_1951_0_1, [Score=940, Expect=0.0]} {RNA1509_1337} {RNA1310_1154} {RNA815_458.1}
2.	MligTC455_21986	2579	53.74	Mlig455_020139	Neo: - Age: logFC(26M/2M)=0.343	ACTN1	5.79	0.962	0.975	0.900	0.983	0.984	0.986	Mlig455_020139 {REF} {Length: 4866} {Pfam: Spectrin repeat [PF00435.23, score=123.0]; Ca2+ insensitive EF hand [PF08726.12, score=86.5]; EF hand [PF00036.34, score=31.2]; EF-hand domain [PF13405.8, score=23.5]; EF-hand domain pair [PF13499.8, score=21.4]} {Human: ENSG00000072110, ACTN1, actinin alpha 1, [Score=541, Expect=0.0]; ENSG00000282844, ACTN4, actinin alpha 4, [Score=538, Expect=0.0]; ENSG00000130402, ACTN4, actinin alpha 4, [Score=538, Expect=0.0]; ENSG00000077522, ACTN2, actinin alpha 2, [Score=535, Expect=0.0]} {Mouse: ENSMUSG00000052374, Actn2, actinin alpha 2, [Score=538, Expect=0.0]; ENSMUSG00000015143, Actn1, actinin, alpha 1, [Score=538, Expect=0.0]; ENSMUSG00000054808, Actn4, actinin alpha 4, [Score=532, Expect=0.0]; ENSMUSG00000006457, Actn3, actinin alpha 3, [Score=513, Expect=1e-173]} {Dmel: FBgn0000667, Actn, alpha actinin, [Score=587, Expect=0.0]} {Celegans: WBGene00000228, atn-1, AcTiniN, [Score=501, Expect=1e-170]} {Smed: dd_Smed_v6_5647_0_1, dd_Smed_v6_5647_0_1, [Score=491, Expect=2e-167]} {RNA1509_26673} {RNA1310_1661} {RNA815_458.1}
3.	MligTC455_28422	4149	86.45	Mlig455_034947	Neo: - Age: -	NRCAM	1.801	-	-	-	-	0.960	0.841	Mlig455_034947 {REF} {Length: 4799} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=211.5]; Immunoglobulin I-set domain [PF07679.18, score=207.0]; Immunoglobulin domain [PF13895.8, score=160.6]; Immunoglobulin domain [PF00047.27, score=138.3]; Fibronectin type III domain [PF00041.23, score=100.2]; Immunoglobulin V-set domain [PF07686.19, score=78.2]; Immunoglobulin domain [PF18452.3, score=25.6]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=25.5]} {Human: ENSG00000091129, NRCAM, neuronal cell adhesion molecule, [RH, Score=353, Expect=9e-101]; ENSG00000163531, NFASC, neurofascin, [RH, Score=350, Expect=7e-101]} {Mouse: ENSMUSG00000026442, Nfasc, neurofascin, [RH, Score=353, Expect=9e-102]; ENSMUSG00000020598, Nrcam, neuronal cell adhesion molecule, [RH, Score=345, Expect=9e-99]} {Dmel: FBgn0264975, Nrg, Neuroglian, [RH, Score=510, Expect=2e-157]} {Celegans: WBGene00004732, sax-7, SAX-7 LONGFORM; Sensory AXon guidance, [RH, Score=328, Expect=1e-92]} {Smed: dd_Smed_v6_1916_0_1, dd_Smed_v6_1916_0_1, [RH, Score=777, Expect=0.0]} {RNA1509_629} {RNA1310_1408, RNA1509_629} {RNA1509_629, RNA815_388}
4.	MligTC455_28624	1118	23.3	Mlig455_053977	Neo: - Age: -	RPS6KA1	0.967	-	-	-	-	-	0.967	Mlig455_053977 {REF} {Length: 4063} {Pfam: Protein kinase domain [PF00069.27, score=390.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=215.1]; ABC1 atypical kinase-like domain [PF03109.18, score=44.8]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=35.1]; Kinase-like [PF14531.8, score=34.3]; Phosphotransferase enzyme family [PF01636.25, score=27.5]; Fungal protein kinase [PF17667.3, score=22.0]} {Human: ENSG00000281877, RPS6KA1, ribosomal protein S6 kinase A1, [Score=754, Expect=0.0]; ENSG00000117676, RPS6KA1, ribosomal protein S6 kinase A1, [Score=754, Expect=0.0]; ENSG00000071242, RPS6KA2, ribosomal protein S6 kinase A2, [Score=748, Expect=0.0]; ENSG00000177189, RPS6KA3, ribosomal protein S6 kinase A3, [Score=744, Expect=0.0]} {Mouse: ENSMUSG00000003644, Rps6ka1, ribosomal protein S6 kinase polypeptide 1, [Score=756, Expect=0.0]; ENSMUSG00000023809, Rps6ka2, ribosomal protein S6 kinase, polypeptide 2, [Score=755, Expect=0.0]; ENSMUSG00000031309, Rps6ka3, ribosomal protein S6 kinase polypeptide 3, [Score=743, Expect=0.0]} {Dmel: FBgn0262866, S6kII, Ribosomal protein S6 kinase II, [Score=657, Expect=0.0]} {Celegans: WBGene00011352, rskn-1, Putative ribosomal protein S6 kinase alpha-1, [Score=632, Expect=0.0]} {Smed: dd_Smed_v6_4316_0_1, dd_Smed_v6_4316_0_1, [Score=717, Expect=0.0]} {RNA1509_1755} {RNA1310_2220.1} {RNA815_703.1}
5.	MligTC455_42363	1971	41.07	Mlig455_021431	Neo: - Age: logFC(26M/2M)=-0.140	PPP2R5A	0.951	-	-	-	-	0.951	-	Mlig455_021431 {REF} {Length: 3612} {TRANSSPLICED} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=574.1]} {Human: ENSG00000066027, PPP2R5A, protein phosphatase 2 regulatory subunit B'alpha, [RH, Score=658, Expect=0.0]; ENSG00000154001, PPP2R5E, protein phosphatase 2 regulatory subunit B'epsilon, [RH, Score=642, Expect=0.0]} {Mouse: ENSMUSG00000026626, Ppp2r5a, protein phosphatase 2, regulatory subunit B', alpha, [RH, Score=669, Expect=0.0]; ENSMUSG00000021051, Ppp2r5e, protein phosphatase 2, regulatory subunit B', epsilon, [RH, Score=641, Expect=0.0]} {Dmel: FBgn0027492, wdb, widerborst, [RH, Score=652, Expect=0.0]} {Celegans: WBGene00012348, pptr-1, Serine/threonine-protein phosphatase 2A regulatory subunit pptr-1, [RH, Score=635, Expect=0.0]} {Smed: dd_Smed_v6_2613_0_4, dd_Smed_v6_2613_0_4, [RH, Score=696, Expect=0.0]} {RNA1509_38987, RNA1509_4079, RNA1509_44859} {RNA1310_10063.1, RNA1509_38987, RNA1509_4079, RNA1509_44859} {RNA1509_38987, RNA1509_4079, RNA1509_44859, RNA815_3543}
6.	MligTC455_51534	1205	25.1	Mlig455_056636	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_056636 {REF} {Length: 3390} {TRANSSPLICED} {RNA1509_19738, RNA1509_24799, RNA1509_43268, RNA1509_47767, RNA1509_47941, RNA1509_50043} {RNA1310_480.1, RNA1509_19738, RNA1509_24799, RNA1509_43268, RNA1509_47767, RNA1509_47941, RNA1509_50043} {RNA1509_19738, RNA1509_24799, RNA1509_43268, RNA1509_47767, RNA1509_47941, RNA1509_50043, RNA815_1360.1}

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