Data search
Results for MligTC455_22105
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22105 | 59 | 1.24 | Mlig455_041722 | Neo: - Age: Down-Down-Up |
Mlig455_041722 {REF} {Length: 3310} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=66.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=53.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=28.0]; Integrase core domain [PF13683.8, score=23.3]; Integrase core domain [PF00665.28, score=22.5]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=73.9, Expect=6e-13]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=73.9, Expect=6e-13]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=164, Expect=3e-43]} {RNA1509_57080} {RNA1310_6076.2} {RNA815_2898} |
Cumulative graph for MligTC455_22105
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.118 | 1.226 | 0.99983 | 1.00000 | |
| RegionR2 | 0.719 | 1.226 | 0.49038 | 0.87208 | |
| RegionR3 | 1.809 | 1.226 | 0.12847 | 0.61609 | |
| RegionR4 | 0.598 | 1.226 | 0.41248 | 0.73966 | |
| RegionR5 | -1.886 | 1.226 | 1.00000 | 1.00000 | |
| RegionR6 | 0.071 | 1.226 | 0.60962 | 1.00000 | |
| RegionR7 | -3.127 | 1.226 | 1.00000 | 1.00000 | |
| RegionR8 | 3.934 | 1.226 | 0.03887 | 0.38817 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.266 | 1.226 | 0.70996 | 1.00000 | |
| RegenerationR2 | -2.073 | 1.226 | 0.05167 | 0.37544 | |
| RegenerationR3 | -1.102 | 1.226 | 0.26960 | 0.70374 | |
| RegenerationR4 | -1.025 | 1.226 | 0.49282 | 0.86583 | |
| RegenerationR5 | 1.424 | 1.226 | 0.18120 | 0.61109 | |
| RegenerationR6 | -2.572 | 1.226 | 0.11648 | 0.41982 | |
| RegenerationBL | -4.698 | 1.226 | 1.00000 | 1.00000 | |
| RegenerationTP | 2.189 | 1.226 | 0.31349 | 0.75843 |
Genes with expression patterns similar to MligTC455_22105
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_22105 | 59 | 1.24 | Mlig455_041722 | Neo: - Age: Down-Down-Up |
3 | - | - | 1.000 | - | 1.000 | 1.000 | Mlig455_041722 {REF} {Length: 3310} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=66.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=53.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=28.0]; Integrase core domain [PF13683.8, score=23.3]; Integrase core domain [PF00665.28, score=22.5]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=73.9, Expect=6e-13]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=73.9, Expect=6e-13]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=164, Expect=3e-43]} {RNA1509_57080} {RNA1310_6076.2} {RNA815_2898} | |
| 2. | MligTC455_47986 | 81 | 1.69 | Mlig455_069736 | Neo: - Age: - |
1.728 | - | - | - | - | 0.768 | 0.960 | Mlig455_069736 {REF} {Length: 439} {RNA1310_81796} {RNA815_47965} | |
| 3. | MligTC455_36510 | 33 | 0.68 | Mlig455_029769, Mlig455_029922 | Neo: - Age: Down-Up-Up |
SLC35B3 | 0.97 | - | - | - | - | - | 0.970 | Mlig455_029769 {REF} {Length: 776} {RNA1310_16119} {RNA815_25188} Mlig455_029922 {REF} {Length: 1637} {TRANSSPLICED} {Pfam: UAA transporter family [PF08449.13, score=70.4]; Cytochrome c oxidase subunit VIc [PF02937.17, score=18.9]} {Human: ENSG00000124786, SLC35B3, solute carrier family 35 member B3, [Score=103, Expect=2e-24]} {Mouse: ENSMUSG00000021432, Slc35b3, solute carrier family 35, member B3, [Score=114, Expect=3e-27]} {Dmel: FBgn0036695, Papst2, PAPS transporter 2, [Score=100, Expect=1e-22]} {Celegans: WBGene00018827, pst-2, Adenosine 3'-phospho 5'-phosphosulfate transporter 2, [Score=93.2, Expect=1e-20]} {Smed: dd_Smed_v6_8200_0_1, dd_Smed_v6_8200_0_1, [Score=101, Expect=2e-23]} {RNA1509_40272, RNA1509_56251} {RNA1310_16119, RNA1509_56251} {RNA1509_56251, RNA815_25188} |
| 4. | MligTC455_25059 | 318 | 6.63 | Mlig455_011858 | Neo: - Age: logFC(26M/2M)=-0.243 Regeneration-downregulated BL: -7.201 Regeneration-depleted BL: -7.201 |
RASEF | 0.965 | - | - | - | - | - | 0.965 | Mlig455_011858 {REF} {Length: 4102} {Pfam: Ras family [PF00071.24, score=167.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=104.0]; ADP-ribosylation factor family [PF00025.23, score=55.2]; EF-hand domain pair [PF13499.8, score=42.0]; EF hand [PF00036.34, score=41.4]; EF-hand domain [PF13405.8, score=39.3]; 50S ribosome-binding GTPase [PF01926.25, score=35.1]; EF-hand domain pair [PF13833.8, score=33.0]; EF hand [PF13202.8, score=28.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=25.9]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.8]; Signal recognition particle receptor beta subunit [PF09439.12, score=21.8]} {Human: ENSG00000165105, RASEF, RAS and EF-hand domain containing, [RH, Score=221, Expect=9e-61]} {Mouse: ENSMUSG00000043003, Rasef, RAS and EF hand domain containing, [RH, Score=222, Expect=9e-63]} {Dmel: FBgn0285937, Rab1, [Score=145, Expect=2e-39]} {Celegans: WBGene00016344, rsef-1, Ras and EF-hand domain-containing protein homolog, [RH, Score=188, Expect=3e-50]} {Smed: dd_Smed_v6_4284_0_1, dd_Smed_v6_4284_0_1, [RH, Score=225, Expect=2e-62]} {RNA1509_21698} {RNA1310_2939.1, RNA1509_21698} {RNA1509_21698, RNA815_9067} |
| 5. | MligTC455_26296 | 29 | 0.6 | Mlig455_039775 | Neo: - |
0.964 | - | - | - | - | - | 0.964 | Mlig455_039775 {REF} {Length: 11147} {RNA1509_17190} {RNA1310_9848.1} {RNA815_5685.1} | |
| 6. | MligTC455_52599 | 150 | 3.13 | Mlig455_047898, Mlig455_047984 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.871/0.01197 Regeneration-downregulated R4: -2.949 Regeneration-depleted R4: -2.949 |
ADRA1A | 0.958 | - | - | - | - | - | 0.958 | Mlig455_047898 {REF} {Length: 1932} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=101.4]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=29.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=26.9]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=78.6, Expect=5e-15]} {Mouse: ENSMUSG00000056380, Gpr50, G-protein-coupled receptor 50, [Score=79.3, Expect=2e-15]; ENSMUSG00000045875, Adra1a, adrenergic receptor, alpha 1a, [Score=76.3, Expect=2e-14]} {Dmel: FBgn0025631, moody, [Score=68.6, Expect=5e-12]} {Celegans: WBGene00006475, tyra-3, TYRAmine receptor, [Score=61.6, Expect=6e-10]} {Smed: dd_Smed_v6_15479_0_1, dd_Smed_v6_15479_0_1, [Score=82.0, Expect=7e-17]} {RNA1310_11537} {RNA815_15213} Mlig455_047984 {REF} {Length: 1890} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=101.4]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=29.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=26.9]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=78.6, Expect=5e-15]} {Mouse: ENSMUSG00000056380, Gpr50, G-protein-coupled receptor 50, [Score=79.3, Expect=2e-15]; ENSMUSG00000045875, Adra1a, adrenergic receptor, alpha 1a, [Score=76.3, Expect=2e-14]} {Dmel: FBgn0025631, moody, [Score=68.6, Expect=5e-12]} {Celegans: WBGene00006475, tyra-3, TYRAmine receptor, [Score=61.2, Expect=6e-10]} {Smed: dd_Smed_v6_15479_0_1, dd_Smed_v6_15479_0_1, [Score=82.0, Expect=7e-17]} {RNA1310_11537} {RNA815_15213} |
| 7. | MligTC455_19109 | 38 | 0.79 | Mlig455_044535 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_044535 {REF} {Length: 2432} {RNA1310_41313} {RNA815_22204} |
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