TomoSeq data search

Data search

Results for MligTC455_36510

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36510

33

0.68

Mlig455_029769, Mlig455_029922

Neo: -

Age: Down-Up-Up

SLC35B3

Mlig455_029769 {REF} {Length: 776} {RNA1310_16119} {RNA815_25188}

Mlig455_029922 {REF} {Length: 1637} {TRANSSPLICED} {Pfam: UAA transporter family [PF08449.13, score=70.4]; Cytochrome c oxidase subunit VIc [PF02937.17, score=18.9]} {Human: ENSG00000124786, SLC35B3, solute carrier family 35 member B3, [Score=103, Expect=2e-24]} {Mouse: ENSMUSG00000021432, Slc35b3, solute carrier family 35, member B3, [Score=114, Expect=3e-27]} {Dmel: FBgn0036695, Papst2, PAPS transporter 2, [Score=100, Expect=1e-22]} {Celegans: WBGene00018827, pst-2, Adenosine 3'-phospho 5'-phosphosulfate transporter 2, [Score=93.2, Expect=1e-20]} {Smed: dd_Smed_v6_8200_0_1, dd_Smed_v6_8200_0_1, [Score=101, Expect=2e-23]} {RNA1509_40272, RNA1509_56251} {RNA1310_16119, RNA1509_56251} {RNA1509_56251, RNA815_25188}

Cumulative graph for MligTC455_36510

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.136	0.836	0.99399	1.00000
RegionR2	-1.04	0.836	0.81237	1.00000
RegionR3	-1.001	0.836	0.99929	1.00000
RegionR4	4.959	0.836	0.01249	0.07202
RegionR5	0.636	0.836	0.99715	1.00000
RegionR6	-0.719	0.836	1.00000	1.00000
RegionR7	-1.7	0.836	0.99623	1.00000
RegionR8	3.001	0.836	0.19251	0.78533

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.039	0.836	1.00000	1.00000
RegenerationR2	0.674	0.836	0.79709	0.98867
RegenerationR3	2.223	0.836	0.31499	0.74503
RegenerationR4	-2.096	0.836	0.35254	0.78219
RegenerationR5	-0.109	0.836	0.64901	0.93217
RegenerationR6	0.748	0.836	0.67157	0.90949
RegenerationBL	-0.042	0.836	0.86444	1.00000
RegenerationTP	1.108	0.836	0.77231	1.00000

Genes with expression patterns similar to MligTC455_36510

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36510	33	0.68	Mlig455_029769, Mlig455_029922	Neo: - Age: Down-Up-Up	SLC35B3	2	-	-	-	1.000	-	1.000	Mlig455_029769 {REF} {Length: 776} {RNA1310_16119} {RNA815_25188} Mlig455_029922 {REF} {Length: 1637} {TRANSSPLICED} {Pfam: UAA transporter family [PF08449.13, score=70.4]; Cytochrome c oxidase subunit VIc [PF02937.17, score=18.9]} {Human: ENSG00000124786, SLC35B3, solute carrier family 35 member B3, [Score=103, Expect=2e-24]} {Mouse: ENSMUSG00000021432, Slc35b3, solute carrier family 35, member B3, [Score=114, Expect=3e-27]} {Dmel: FBgn0036695, Papst2, PAPS transporter 2, [Score=100, Expect=1e-22]} {Celegans: WBGene00018827, pst-2, Adenosine 3'-phospho 5'-phosphosulfate transporter 2, [Score=93.2, Expect=1e-20]} {Smed: dd_Smed_v6_8200_0_1, dd_Smed_v6_8200_0_1, [Score=101, Expect=2e-23]} {RNA1509_40272, RNA1509_56251} {RNA1310_16119, RNA1509_56251} {RNA1509_56251, RNA815_25188}
2.	MligTC455_21525	290	6.04	Mlig455_052729	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.421 Region-enriched R4: 2.955/0.03057 Regeneration-downregulated BL: -4.129 Regeneration-depleted BL: -4.129	SLC26A4	0.979	-	-	-	-	-	0.979	Mlig455_052729 {REF} {Length: 5485} {Pfam: Sulfate permease family [PF00916.22, score=271.4]} {Human: ENSG00000091137, SLC26A4, solute carrier family 26 member 4, [Score=248, Expect=4e-72]} {Mouse: ENSMUSG00000020651, Slc26a4, solute carrier family 26, member 4, [Score=242, Expect=5e-70]; ENSMUSG00000034320, Slc26a2, solute carrier family 26 (sulfate transporter), member 2, [Score=236, Expect=3e-68]} {Dmel: FBgn0036770, Prestin, [Score=193, Expect=1e-52]} {Celegans: WBGene00012259, sulp-7, Anion transporter SULP-7c; SULfate Permease family, [Score=196, Expect=7e-55]} {Smed: dd_Smed_v6_4250_0_1, dd_Smed_v6_4250_0_1, [Score=248, Expect=1e-72]} {RNA1509_26971, RNA1509_42478} {RNA1310_9220.2, RNA1509_26971, RNA1509_42478} {RNA1509_26971, RNA1509_42478, RNA815_1075.1}
3.	MligTC455_36990	44	0.91	Mlig455_042274	Neo: - Age: -		0.973	-	-	-	-	-	0.973	Mlig455_042274 {REF} {Length: 1793} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=36.0]; TgpA N-terminal domain [PF11992.10, score=19.0]} {Smed: dd_Smed_v6_24483_0_1, dd_Smed_v6_24483_0_1, [RH, Score=138, Expect=2e-36]} {RNA1310_21197} {RNA815_30263}
4.	MligTC455_28989	92	1.92	Mlig455_016760	Neo: - Age: Up-Down-Down		0.972	-	-	-	-	-	0.972	Mlig455_016760 {REF} {Length: 2689} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59281} {RNA1310_51359} {RNA815_16150.1}
5.	MligTC455_25059	318	6.63	Mlig455_011858	Neo: - Age: logFC(26M/2M)=-0.243 Regeneration-downregulated BL: -7.201 Regeneration-depleted BL: -7.201	RASEF	0.971	-	-	-	-	-	0.971	Mlig455_011858 {REF} {Length: 4102} {Pfam: Ras family [PF00071.24, score=167.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=104.0]; ADP-ribosylation factor family [PF00025.23, score=55.2]; EF-hand domain pair [PF13499.8, score=42.0]; EF hand [PF00036.34, score=41.4]; EF-hand domain [PF13405.8, score=39.3]; 50S ribosome-binding GTPase [PF01926.25, score=35.1]; EF-hand domain pair [PF13833.8, score=33.0]; EF hand [PF13202.8, score=28.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=25.9]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.8]; Signal recognition particle receptor beta subunit [PF09439.12, score=21.8]} {Human: ENSG00000165105, RASEF, RAS and EF-hand domain containing, [RH, Score=221, Expect=9e-61]} {Mouse: ENSMUSG00000043003, Rasef, RAS and EF hand domain containing, [RH, Score=222, Expect=9e-63]} {Dmel: FBgn0285937, Rab1, [Score=145, Expect=2e-39]} {Celegans: WBGene00016344, rsef-1, Ras and EF-hand domain-containing protein homolog, [RH, Score=188, Expect=3e-50]} {Smed: dd_Smed_v6_4284_0_1, dd_Smed_v6_4284_0_1, [RH, Score=225, Expect=2e-62]} {RNA1509_21698} {RNA1310_2939.1, RNA1509_21698} {RNA1509_21698, RNA815_9067}
6.	MligTC455_22105	59	1.24	Mlig455_041722	Neo: - Age: Down-Down-Up		0.97	-	-	-	-	-	0.970	Mlig455_041722 {REF} {Length: 3310} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=66.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=53.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=28.0]; Integrase core domain [PF13683.8, score=23.3]; Integrase core domain [PF00665.28, score=22.5]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=73.9, Expect=6e-13]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=73.9, Expect=6e-13]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=164, Expect=3e-43]} {RNA1509_57080} {RNA1310_6076.2} {RNA815_2898}
7.	MligTC455_47986	81	1.69	Mlig455_069736	Neo: - Age: -		0.968	-	-	-	-	-	0.968	Mlig455_069736 {REF} {Length: 439} {RNA1310_81796} {RNA815_47965}
8.	MligTC455_53398	128	2.67	Mlig455_026028, Mlig455_050839	Neo: - Age: logFC(26M/2M)=-0.312 Region-enriched R7: 2.957/0.04443		0.968	-	-	-	-	-	0.968	Mlig455_026028 {REF} {Length: 2365} {Smed: dd_Smed_v6_5057_0_1, dd_Smed_v6_5057_0_1, [Score=87.0, Expect=7e-19]} {RNA1509_41869} {RNA1310_7345} {RNA815_2474} Mlig455_050839 {REF} {Length: 2813} {Smed: dd_Smed_v6_5057_0_1, dd_Smed_v6_5057_0_1, [Score=87.4, Expect=8e-19]} {RNA1509_19815, RNA1509_41869} {RNA1310_7345, RNA1509_19815, RNA1509_41869} {RNA1509_19815, RNA1509_41869, RNA815_2474}
9.	MligTC455_52599	150	3.13	Mlig455_047898, Mlig455_047984	Neo: - Age: Down-Up-Down Region-enriched R4: 1.871/0.01197 Regeneration-downregulated R4: -2.949 Regeneration-depleted R4: -2.949	ADRA1A	0.966	-	-	-	-	-	0.966	Mlig455_047898 {REF} {Length: 1932} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=101.4]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=29.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=26.9]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=78.6, Expect=5e-15]} {Mouse: ENSMUSG00000056380, Gpr50, G-protein-coupled receptor 50, [Score=79.3, Expect=2e-15]; ENSMUSG00000045875, Adra1a, adrenergic receptor, alpha 1a, [Score=76.3, Expect=2e-14]} {Dmel: FBgn0025631, moody, [Score=68.6, Expect=5e-12]} {Celegans: WBGene00006475, tyra-3, TYRAmine receptor, [Score=61.6, Expect=6e-10]} {Smed: dd_Smed_v6_15479_0_1, dd_Smed_v6_15479_0_1, [Score=82.0, Expect=7e-17]} {RNA1310_11537} {RNA815_15213} Mlig455_047984 {REF} {Length: 1890} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=101.4]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=29.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=26.9]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=78.6, Expect=5e-15]} {Mouse: ENSMUSG00000056380, Gpr50, G-protein-coupled receptor 50, [Score=79.3, Expect=2e-15]; ENSMUSG00000045875, Adra1a, adrenergic receptor, alpha 1a, [Score=76.3, Expect=2e-14]} {Dmel: FBgn0025631, moody, [Score=68.6, Expect=5e-12]} {Celegans: WBGene00006475, tyra-3, TYRAmine receptor, [Score=61.2, Expect=6e-10]} {Smed: dd_Smed_v6_15479_0_1, dd_Smed_v6_15479_0_1, [Score=82.0, Expect=7e-17]} {RNA1310_11537} {RNA815_15213}
10.	MligTC455_49720	94	1.96	Mlig455_012341	Neo: - Age: -	CACNA2D4	0.965	-	-	-	-	-	0.965	Mlig455_012341 {REF} {Length: 3966} {Pfam: Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=38.3]} {Human: ENSG00000151062, CACNA2D4, calcium voltage-gated channel auxiliary subunit alpha2delta 4, [Score=187, Expect=2e-48]; ENSG00000284953, CACNA2D4, calcium voltage-gated channel auxiliary subunit alpha2delta 4, [Score=187, Expect=2e-48]} {Mouse: ENSMUSG00000041460, Cacna2d4, calcium channel, voltage-dependent, alpha 2/delta subunit 4, [Score=192, Expect=3e-50]} {Dmel: FBgn0261041, stj, straightjacket, [Score=181, Expect=1e-46]} {Celegans: WBGene00006772, unc-36, Voltage-dependent calcium channel unc-36, [Score=109, Expect=4e-24]} {Smed: dd_Smed_v6_8926_0_2, dd_Smed_v6_8926_0_2, [Score=202, Expect=1e-53]} {RNA1509_21808} {RNA1310_2669.1} {RNA815_5027}
11.	MligTC455_42483	23	0.48	Mlig455_058290	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_058290 {REF} {Length: 1476} {NoTransDecoderORF} {RNA1509_25786} {RNA1310_64824} {RNA815_44462}
12.	MligTC455_09735	18	0.37	Mlig455_006484	Neo: - Age: -		0.961	-	-	-	0.961	-	-	Mlig455_006484 {REF} {Length: 2559} {NoTransDecoderORF} {RNA1509_46209} {RNA1310_96313.1} {RNA815_20255}
13.	MligTC455_43352	95	1.98	Mlig455_036042, Mlig455_036143, Mlig455_036169	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_036042 {REF} {Length: 601} {NoTransDecoderORF} {RNA1310_52240} {RNA815_32818} Mlig455_036143 {REF} {Length: 706} {RNA1310_52240} {RNA815_32818} Mlig455_036169 {REF} {Length: 944} {NoTransDecoderORF} {RNA1310_52240} {RNA815_32818}

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