Data search
Results for MligTC455_22114
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22114 | 58 | 1.20 | Mlig455_011205 | Neo: - Age: Up-Down-Up |
Mlig455_011205 {REF} {Length: 4492} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=67.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=28.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.9]; Integrase core domain [PF13683.8, score=22.7]; Aspartyl protease [PF13650.8, score=22.1]; Integrase core domain [PF00665.28, score=21.9]} {Smed: dd_Smed_v6_6746_0_1, dd_Smed_v6_6746_0_1, [Score=64.3, Expect=2e-10]} {RNA1509_57080} {RNA1310_6076.2} {RNA815_6067.1} |
Cumulative graph for MligTC455_22114
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.707 | 1.33 | 0.84204 | 1.00000 | |
| RegionR2 | -0.682 | 1.33 | 0.98207 | 1.00000 | |
| RegionR3 | -0.616 | 1.33 | 0.97555 | 1.00000 | |
| RegionR4 | 1.061 | 1.33 | 0.58273 | 0.89890 | |
| RegionR5 | -0.838 | 1.33 | 0.98603 | 1.00000 | |
| RegionR6 | -0.26 | 1.33 | 0.94775 | 1.00000 | |
| RegionR7 | 0.346 | 1.33 | 0.80796 | 1.00000 | |
| RegionR8 | 1.696 | 1.33 | 0.46442 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.531 | 1.33 | 0.99984 | 1.00000 | |
| RegenerationR2 | -1.532 | 1.33 | 0.37680 | 0.79987 | |
| RegenerationR3 | -1.466 | 1.33 | 0.42713 | 0.81934 | |
| RegenerationR4 | -2.545 | 1.33 | 0.15679 | 0.58820 | |
| RegenerationR5 | -0.154 | 1.33 | 0.89366 | 1.00000 | |
| RegenerationR6 | -0.553 | 1.33 | 0.74159 | 0.94801 | |
| RegenerationBL | 0.709 | 1.33 | 0.73902 | 1.00000 | |
| RegenerationTP | -0.159 | 1.33 | 0.91106 | 1.00000 |
Genes with expression patterns similar to MligTC455_22114
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_22114 | 58 | 1.2 | Mlig455_011205 | Neo: - Age: Up-Down-Up |
3 | - | - | 1.000 | - | 1.000 | 1.000 | Mlig455_011205 {REF} {Length: 4492} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=67.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=28.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.9]; Integrase core domain [PF13683.8, score=22.7]; Aspartyl protease [PF13650.8, score=22.1]; Integrase core domain [PF00665.28, score=21.9]} {Smed: dd_Smed_v6_6746_0_1, dd_Smed_v6_6746_0_1, [Score=64.3, Expect=2e-10]} {RNA1509_57080} {RNA1310_6076.2} {RNA815_6067.1} | |
| 2. | MligTC455_23145 | 43 | 0.91 | Mlig455_014752 | Neo: - Age: logFC(26M/2M)=-0.605 |
AC243734.1 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_014752 {REF} {Length: 3129} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=213.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=186.0]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=425, Expect=1e-143]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=425, Expect=1e-143]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=421, Expect=4e-142]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [RH, Score=429, Expect=1e-145]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [RH, Score=491, Expect=7e-166]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [RH, Score=402, Expect=5e-135]} {Smed: dd_Smed_v6_18184_0_1, dd_Smed_v6_18184_0_1, [RH, Score=486, Expect=1e-167]} {RNA1310_22414.1} {RNA815_34255} |
| 3. | MligTC455_32278 | 31 | 0.65 | Mlig455_041080 | Neo: - Age: Up-Down-Down |
USH2A | 0.963 | - | - | - | - | - | 0.963 | Mlig455_041080 {REF} {Length: 15804} {Pfam: Fibronectin type III domain [PF00041.23, score=464.0]; Laminin EGF domain [PF00053.26, score=197.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=110.9]; Laminin G domain [PF02210.26, score=79.7]; Laminin G domain [PF00054.25, score=43.4]; Fibronectin type III domain [PF16893.7, score=43.3]; Chitinase A, N-terminal domain [PF08329.12, score=22.2]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=20.5]} {Human: ENSG00000042781, USH2A, usherin, [Score=1148, Expect=0.0]} {Mouse: ENSMUSG00000026609, Ush2a, usherin, [Score=1111, Expect=0.0]} {Dmel: FBgn0261563, wb, wing blister, [Score=265, Expect=7e-70]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=267, Expect=1e-70]} {Smed: dd_Smed_v6_7924_0_5, dd_Smed_v6_7924_0_5, [Score=229, Expect=2e-59]} {RNA1509_43154} {RNA1310_15599} {RNA815_35868} |
| 4. | MligTC455_16918 | 1218 | 25.38 | Mlig455_039085, Mlig455_042780 | Neo: - Age: Up-Down-Down Region-enriched R8: 5.308/0.00000 |
MECOM | 0.952 | - | - | - | - | - | 0.952 | Mlig455_039085 {REF} {Length: 4916} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=99.3]; C2H2-type zinc finger [PF13894.8, score=76.6]; Zinc-finger double domain [PF13465.8, score=72.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=41.2]; C2H2-type zinc finger [PF13912.8, score=35.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=25.5]; Zinc-finger of C2H2 type [PF12874.9, score=20.9]; C2H2-type zinc-finger domain [PF13909.8, score=18.4]} {Human: ENSG00000085276, MECOM, MDS1 and EVI1 complex locus, [RH, Score=147, Expect=6e-35]; ENSG00000142611, PRDM16, PR/SET domain 16, [RH, Score=145, Expect=3e-34]} {Mouse: ENSMUSG00000027684, Mecom, MDS1 and EVI1 complex locus, [RH, Score=146, Expect=2e-35]; ENSMUSG00000039410, Prdm16, PR domain containing 16, [RH, Score=146, Expect=9e-35]} {Dmel: FBgn0045852, ham, hamlet, [RH, Score=149, Expect=1e-36]} {Celegans: WBGene00015646, mlt-10, [Score=172, Expect=3e-44]} {Smed: dd_Smed_v6_22685_0_1, dd_Smed_v6_22685_0_1, [RH, Score=145, Expect=5e-38]} {RNA1509_21422} {RNA1310_3577} {RNA815_16096} Mlig455_042780 {REF} {Length: 3778} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=70.4]; Zinc-finger double domain [PF13465.8, score=59.4]; C2H2-type zinc finger [PF13894.8, score=36.4]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=29.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=29.0]; C2H2-type zinc finger [PF13912.8, score=28.6]; Zinc-finger of C2H2 type [PF12874.9, score=24.8]; C2H2-type zinc-finger domain [PF13909.8, score=21.2]; GAGA factor [PF09237.13, score=19.5]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=18.9]} {Human: ENSG00000085276, MECOM, MDS1 and EVI1 complex locus, [RH, Score=141, Expect=6e-35]; ENSG00000142611, PRDM16, PR/SET domain 16, [RH, Score=139, Expect=3e-34]} {Mouse: ENSMUSG00000027684, Mecom, MDS1 and EVI1 complex locus, [RH, Score=141, Expect=3e-35]; ENSMUSG00000039410, Prdm16, PR domain containing 16, [RH, Score=140, Expect=1e-34]} {Dmel: FBgn0032707, CG10348, [RH, Score=144, Expect=8e-37]} {Celegans: WBGene00001207, egl-43, Egl-43, [RH, Score=98.2, Expect=2e-22]} {Smed: dd_Smed_v6_22685_0_1, dd_Smed_v6_22685_0_1, [RH, Score=144, Expect=9e-39]} {RNA1509_21422} {RNA1310_3577} {RNA815_16096} |
| 5. | MligTC455_17438 | 46 | 0.96 | Mlig455_009857 | Neo: - Age: Up-Down-Down |
FBXO11 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_009857 {REF} {Length: 4725} {Pfam: F-box-like [PF12937.9, score=48.8]; F-box domain [PF00646.35, score=34.0]} {Human: ENSG00000138081, FBXO11, F-box protein 11, [RH, Score=52.8, Expect=8e-08]} {Mouse: ENSMUSG00000005371, Fbxo11, F-box protein 11, [Score=51.2, Expect=3e-06]} {Dmel: FBgn0039667, CG2010, [RH, Score=463, Expect=5e-159]} {Celegans: WBGene00020884, T28B4.1, [RH, Score=398, Expect=1e-133]} {Smed: dd_Smed_v6_3719_0_1, dd_Smed_v6_3719_0_1, [RH, Score=592, Expect=0.0]} {RNA1310_14873} {RNA815_6627} |
| 6. | MligTC455_08996 | 36 | 0.74 | Mlig455_026604 | Neo: - Age: - |
ANK1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_026604 {REF} {Length: 3269} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=180.0]; Ankyrin repeat [PF00023.32, score=153.8]; Ankyrin repeats (many copies) [PF13637.8, score=145.9]; Ankyrin repeat [PF13606.8, score=137.9]; Ankyrin repeats (many copies) [PF13857.8, score=125.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=159, Expect=6e-41]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=144, Expect=3e-36]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=143, Expect=4e-36]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=142, Expect=1e-35]; ENSMUSG00000032257, Ankk1, ankyrin repeat and kinase domain containing 1, [Score=138, Expect=2e-34]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=156, Expect=2e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=149, Expect=2e-38]} {Smed: dd_Smed_v6_11663_0_2, dd_Smed_v6_11663_0_2, [Score=132, Expect=5e-33]} {RNA1509_49335} {RNA1310_6702} {RNA815_17045} |
| 7. | MligTC455_49056 | 35 | 0.73 | Mlig455_050966 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_050966 {REF} {Length: 3161} {RNA1310_22446.1} {RNA815_21821.1} | |
| 8. | MligTC455_40587 | 52 | 1.09 | Mlig455_002665 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_002665 {REF} {Length: 2505} {TRANSSPLICED} {Smed: dd_Smed_v6_14679_0_1, dd_Smed_v6_14679_0_1, [Score=85.9, Expect=9e-18]} |
Berezikov Lab - 2020-2021 © ERIBA