TomoSeq data search

Data search

Results for MligTC455_22152

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22152

7067

147.22

Mlig455_016051

Neo: -

Age: -

Region-enriched R3: 1.307/0.00030

XDH

Mlig455_016051 {REF} {Length: 4858} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=403.3]; [2Fe-2S] binding domain [PF01799.22, score=95.5]; FAD binding domain in molybdopterin dehydrogenase [PF00941.23, score=89.0]; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain [PF01315.24, score=75.4]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.19, score=67.3]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=26.4]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=516, Expect=3e-160]; ENSG00000138356, AOX1, aldehyde oxidase 1, [Score=503, Expect=2e-155]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=521, Expect=4e-162]; ENSMUSG00000063558, Aox1, aldehyde oxidase 1, [Score=498, Expect=1e-153]} {Dmel: FBgn0038348, AOX2, Aldehyde oxidase 2, [RH, Score=674, Expect=0.0]} {Celegans: WBGene00010083, xhd-1, [Score=504, Expect=4e-156]} {RNA1509_21663, RNA1509_325, RNA1509_45555, RNA1509_9229, RNA1509_9570} {RNA1310_1603.1, RNA1509_21663, RNA1509_45555, RNA1509_9229, RNA1509_9570} {RNA1509_21663, RNA1509_45555, RNA1509_9229, RNA1509_9570, RNA815_224.2}

Cumulative graph for MligTC455_22152

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.679	7.329	0.21898	0.86114
RegionR2	0.262	7.329	0.46189	0.84894
RegionR3	1.307	7.329	0.00000	0.00030
RegionR4	0.66	7.329	0.05500	0.20572
RegionR5	0.369	7.329	0.20341	0.49556
RegionR6	0.443	7.329	0.14162	0.67486
RegionR7	-1.288	7.329	0.00053	0.02145
RegionR8	-1.073	7.329	0.00981	0.18647

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.668	7.329	0.32632	1.00000
RegenerationR2	0.031	7.329	0.93618	1.00000
RegenerationR3	-0.292	7.329	0.45389	0.83388
RegenerationR4	0.067	7.329	0.86729	1.00000
RegenerationR5	0.536	7.329	0.16889	0.59607
RegenerationR6	0.094	7.329	0.80741	0.98099
RegenerationBL	0.099	7.329	0.78771	1.00000
RegenerationTP	0.352	7.329	0.39180	0.82340

Genes with expression patterns similar to MligTC455_22152

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22152	7067	147.22	Mlig455_016051	Neo: - Age: - Region-enriched R3: 1.307/0.00030	XDH	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016051 {REF} {Length: 4858} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=403.3]; [2Fe-2S] binding domain [PF01799.22, score=95.5]; FAD binding domain in molybdopterin dehydrogenase [PF00941.23, score=89.0]; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain [PF01315.24, score=75.4]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.19, score=67.3]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=26.4]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=516, Expect=3e-160]; ENSG00000138356, AOX1, aldehyde oxidase 1, [Score=503, Expect=2e-155]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=521, Expect=4e-162]; ENSMUSG00000063558, Aox1, aldehyde oxidase 1, [Score=498, Expect=1e-153]} {Dmel: FBgn0038348, AOX2, Aldehyde oxidase 2, [RH, Score=674, Expect=0.0]} {Celegans: WBGene00010083, xhd-1, [Score=504, Expect=4e-156]} {RNA1509_21663, RNA1509_325, RNA1509_45555, RNA1509_9229, RNA1509_9570} {RNA1310_1603.1, RNA1509_21663, RNA1509_45555, RNA1509_9229, RNA1509_9570} {RNA1509_21663, RNA1509_45555, RNA1509_9229, RNA1509_9570, RNA815_224.2}
2.	MligTC455_22153	3277	68.26	Mlig455_054983	Neo: - Age: - Region-enriched R3: 1.428/0.00000	XDH	4.663	0.927	0.977	-	0.934	0.901	0.924	Mlig455_054983 {REF} {Length: 4979} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=402.2]; [2Fe-2S] binding domain [PF01799.22, score=95.5]; FAD binding domain in molybdopterin dehydrogenase [PF00941.23, score=89.2]; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain [PF01315.24, score=75.4]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.19, score=67.3]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=26.4]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=513, Expect=5e-159]; ENSG00000138356, AOX1, aldehyde oxidase 1, [Score=499, Expect=7e-154]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=516, Expect=4e-160]; ENSMUSG00000063558, Aox1, aldehyde oxidase 1, [Score=495, Expect=2e-152]} {Dmel: FBgn0038348, AOX2, Aldehyde oxidase 2, [RH, Score=671, Expect=0.0]} {Celegans: WBGene00010083, xhd-1, [Score=505, Expect=2e-156]} {RNA1509_325, RNA1509_48876, RNA1509_54020} {RNA1310_1603.1, RNA1509_325, RNA1509_48876, RNA1509_54020} {RNA1509_325, RNA1509_48876, RNA1509_54020, RNA815_224.2}
3.	MligTC455_42760	1892	39.41	Mlig455_009075, Mlig455_058106	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.413 Region-enriched R3: 1.115/0.01103	LITAF	3.391	0.836	0.719	-	0.965	-	0.871	Mlig455_009075 {REF} {Length: 1925} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=83.0]} {Human: ENSG00000189067, LITAF, lipopolysaccharide induced TNF factor, [RH, Score=96.7, Expect=2e-25]} {Mouse: ENSMUSG00000022500, Litaf, LPS-induced TN factor, [RH, Score=94.7, Expect=1e-24]} {Dmel: FBgn0052280, CG32280, [Score=67.4, Expect=1e-14]} {Celegans: WBGene00009484, F36G3.3, [Score=70.1, Expect=1e-15]} {Smed: dd_Smed_v6_353_0_1, dd_Smed_v6_353_0_1, [Score=77.0, Expect=1e-18]} {RNA1509_16693, RNA1509_40787} {RNA1310_19742, RNA1509_40787} {RNA1509_40787, RNA815_7404.1} Mlig455_058106 {REF} {Length: 2274} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=83.1]} {Human: ENSG00000189067, LITAF, lipopolysaccharide induced TNF factor, [RH, Score=96.7, Expect=2e-25]} {Mouse: ENSMUSG00000022500, Litaf, LPS-induced TN factor, [RH, Score=94.7, Expect=8e-25]} {Dmel: FBgn0052280, CG32280, [Score=67.0, Expect=1e-14]} {Celegans: WBGene00009484, F36G3.3, [Score=69.7, Expect=2e-15]} {Smed: dd_Smed_v6_353_0_1, dd_Smed_v6_353_0_1, [Score=77.0, Expect=1e-18]} {RNA1509_16693, RNA1509_20163, RNA1509_44637, RNA1509_6496} {RNA1310_19742, RNA1509_16693, RNA1509_20163, RNA1509_44637, RNA1509_6496} {RNA1509_16693, RNA1509_20163, RNA1509_44637, RNA1509_6496, RNA815_7404.1}
4.	MligTC455_37433	7268	151.41	Mlig455_013022, Mlig455_013050, Mlig455_013070	Neo: - Age: Down-Up-Up Region-enriched R3: 1.556/0.00049 Region-enriched R2: 1.281/0.03004		3.356	0.704	-	-	0.852	0.829	0.971	Mlig455_013022 {REF} {Length: 3627} {TRANSSPLICED} {RNA1509_34717, RNA1509_4091, RNA1509_4459} {RNA1310_32053, RNA1509_34717, RNA1509_4091, RNA1509_4459} {RNA1509_34717, RNA1509_4091, RNA1509_4459, RNA815_22988.1} Mlig455_013050 {REF} {Length: 1297} {RNA1509_34717} {RNA1310_32053} {RNA815_22988.1} Mlig455_013070 {REF} {Length: 2075} {RNA1509_34717} {RNA1310_32053} {RNA815_22988.1}
5.	MligTC455_52123	2731	56.9	Mlig455_016050	Neo: - Age: logFC(26M/2M)=0.619 Region-enriched R4: 1.844/0.00026 Region-enriched R3: 1.436/0.00119	SORD	3.319	0.762	0.819	-	-	0.754	0.984	Mlig455_016050 {REF} {Length: 2282} {Pfam: Alcohol dehydrogenase GroES-like domain [PF08240.14, score=78.2]; Zinc-binding dehydrogenase [PF00107.28, score=43.3]; Glucose dehydrogenase C-terminus [PF16912.7, score=38.3]} {Human: ENSG00000140263, SORD, sorbitol dehydrogenase, [Score=88.6, Expect=4e-19]} {Mouse: ENSMUSG00000027227, Sord, sorbitol dehydrogenase, [Score=76.3, Expect=6e-15]} {Dmel: FBgn0022359, Sodh-2, Sorbitol dehydrogenase-2, [Score=72.4, Expect=7e-14]} {Smed: dd_Smed_v6_1002_0_1, dd_Smed_v6_1002_0_1, [Score=97.1, Expect=2e-22]} {RNA1509_31307, RNA1509_32515, RNA1509_37328, RNA1509_41461} {RNA1310_27503.1, RNA1509_31307, RNA1509_32515, RNA1509_37328, RNA1509_41461} {RNA1509_31307, RNA1509_32515, RNA1509_37328, RNA1509_41461, RNA815_11995}
6.	MligTC455_27711	5412	112.74	Mlig455_015953	Neo: - Age: -		1.869	-	-	-	0.886	0.983	-	Mlig455_015953 {REF} {Length: 4324} {TRANSSPLICED} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=59.3, Expect=2e-08]} {RNA1509_1071, RNA1509_17652, RNA1509_2106, RNA1509_25765, RNA1509_25775, RNA1509_33455, RNA1509_34384, RNA1509_40442, RNA1509_42939, RNA1509_46109, RNA1509_46798, RNA1509_48212} {RNA1310_1918.1, RNA1509_1071, RNA1509_17652, RNA1509_2106, RNA1509_25765, RNA1509_25775, RNA1509_33455, RNA1509_34384, RNA1509_40442, RNA1509_42939, RNA1509_46109, RNA1509_46798, RNA1509_48212} {RNA1509_1071, RNA1509_17652, RNA1509_2106, RNA1509_25765, RNA1509_25775, RNA1509_33455, RNA1509_34384, RNA1509_40442, RNA1509_42939, RNA1509_46109, RNA1509_46798, RNA1509_48212, RNA815_538.1}
7.	MligTC455_27712	5577	116.18	Mlig455_059719	Neo: - Age: -		1.79	-	-	-	0.831	0.959	-	Mlig455_059719 {REF} {Length: 4325} {TRANSSPLICED} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=65.5, Expect=2e-10]} {RNA1509_1071, RNA1509_17967, RNA1509_19113, RNA1509_29157, RNA1509_39122, RNA1509_51921} {RNA1310_1918.1, RNA1509_17967, RNA1509_19113, RNA1509_29157, RNA1509_39122, RNA1509_51921} {RNA1509_17967, RNA1509_19113, RNA1509_29157, RNA1509_39122, RNA1509_51921, RNA815_538.1}
8.	MligTC455_50495	13124	273.42	Mlig455_011775	Neo: - Age: -	AZIN2	1.747	-	-	-	0.952	0.795	-	Mlig455_011775 {REF} {Length: 2502} {TRANSSPLICED} {Pfam: Pyridoxal-dependent decarboxylase, pyridoxal binding domain [PF02784.18, score=43.6]} {Human: ENSG00000142920, AZIN2, antizyme inhibitor 2, [RH, Score=75.1, Expect=6e-14]; ENSG00000155096, AZIN1, antizyme inhibitor 1, [RH, Score=73.2, Expect=2e-13]} {Mouse: ENSMUSG00000037458, Azin1, antizyme inhibitor 1, [RH, Score=74.7, Expect=6e-14]; ENSMUSG00000028789, Azin2, antizyme inhibitor 2, [RH, Score=73.2, Expect=2e-13]} {Dmel: FBgn0013307, Odc1, Ornithine decarboxylase 1, [RH, Score=66.2, Expect=2e-11]} {Celegans: WBGene00003844, odc-1, Ornithine decarboxylase, [RH, Score=83.2, Expect=5e-17]} {RNA1509_10078, RNA1509_11070, RNA1509_3040, RNA1509_352, RNA1509_3782, RNA1509_4544, RNA1509_4958} {RNA1310_7220, RNA1509_10078, RNA1509_11070, RNA1509_3040, RNA1509_352, RNA1509_3782, RNA1509_4544, RNA1509_4958} {RNA1509_10078, RNA1509_11070, RNA1509_3040, RNA1509_352, RNA1509_3782, RNA1509_4544, RNA1509_4958, RNA815_2372.1}
9.	MligTC455_44973	1023	21.31	Mlig455_009228	Neo: - Age: Down-Up-Up	SC5D	0.975	-	-	-	0.975	-	-	Mlig455_009228 {REF} {Length: 1577} {Pfam: Fatty acid hydroxylase superfamily [PF04116.15, score=84.0]} {Human: ENSG00000109929, SC5D, sterol-C5-desaturase, [RH, Score=350, Expect=2e-121]} {Mouse: ENSMUSG00000032018, Sc5d, sterol-C5-desaturase, [RH, Score=350, Expect=2e-121]} {Dmel: FBgn0030509, CG11162, [Score=63.5, Expect=2e-11]} {Celegans: WBGene00009903, F49E12.10, [Score=58.2, Expect=9e-10]} {Smed: dd_Smed_v6_2938_0_1, dd_Smed_v6_2938_0_1, [Score=57.4, Expect=2e-09]} {RNA1509_30821, RNA1509_39296} {RNA1310_21006.1, RNA1509_30821, RNA1509_39296} {RNA1509_30821, RNA1509_39296, RNA815_7472}
10.	MligTC455_53792	817	17.01	Mlig455_038996	Neo: - Age: logFC(26M/2M)=0.381 Region-enriched R4: 1.650/0.00579 Region-enriched R5: 1.126/0.02292	LRRC58	0.957	-	-	-	0.957	-	-	Mlig455_038996 {REF} {Length: 2501} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=89.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=78.0]; Leucine-rich repeat [PF14580.8, score=28.4]} {Human: ENSG00000163428, LRRC58, leucine rich repeat containing 58, [RH, Score=213, Expect=1e-65]} {Mouse: ENSMUSG00000034158, Lrrc58, leucine rich repeat containing 58, [RH, Score=205, Expect=7e-63]} {Dmel: FBgn0052687, CG32687, [RH, Score=218, Expect=3e-68]} {Celegans: WBGene00021533, Y42G9A.3, [RH, Score=218, Expect=2e-68]} {Smed: dd_Smed_v6_2441_0_1, dd_Smed_v6_2441_0_1, [RH, Score=241, Expect=1e-77]} {RNA1509_10238, RNA1509_18047, RNA1509_23605, RNA1509_30746, RNA1509_37090, RNA1509_41561, RNA1509_7379} {RNA1310_19700.1, RNA1509_10238, RNA1509_18047, RNA1509_23605, RNA1509_30746, RNA1509_37090, RNA1509_41561, RNA1509_7379} {RNA1509_10238, RNA1509_18047, RNA1509_23605, RNA1509_30746, RNA1509_37090, RNA1509_41561, RNA1509_7379, RNA815_3800.1}

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