Data search


search
Exact
Search

Results for MligTC455_44973

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44973 1023 21.31 Mlig455_009228

Neo: -

Age: Down-Up-Up

SC5D Mlig455_009228 {REF} {Length: 1577} {Pfam: Fatty acid hydroxylase superfamily [PF04116.15, score=84.0]} {Human: ENSG00000109929, SC5D, sterol-C5-desaturase, [RH, Score=350, Expect=2e-121]} {Mouse: ENSMUSG00000032018, Sc5d, sterol-C5-desaturase, [RH, Score=350, Expect=2e-121]} {Dmel: FBgn0030509, CG11162, [Score=63.5, Expect=2e-11]} {Celegans: WBGene00009903, F49E12.10, [Score=58.2, Expect=9e-10]} {Smed: dd_Smed_v6_2938_0_1, dd_Smed_v6_2938_0_1, [Score=57.4, Expect=2e-09]} {RNA1509_30821, RNA1509_39296} {RNA1310_21006.1, RNA1509_30821, RNA1509_39296} {RNA1509_30821, RNA1509_39296, RNA815_7472}

Cumulative graph for MligTC455_44973

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.24 4.74 0.24816 0.89443
RegionR2 -0.76 4.74 0.16195 0.50384
RegionR3 0.854 4.74 0.03133 0.30531
RegionR4 0.525 4.74 0.23953 0.53568
RegionR5 0.32 4.74 0.40618 0.76450
RegionR6 0.393 4.74 0.34851 0.93420
RegionR7 -0.205 4.74 0.70433 1.00000
RegionR8 0.114 4.74 0.85627 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.844 4.74 0.63777 1.00000
RegenerationR2 1.265 4.74 0.00819 0.14422
RegenerationR3 0.437 4.74 0.34888 0.76992
RegenerationR4 0.721 4.74 0.13136 0.54785
RegenerationR5 0.943 4.74 0.03855 0.32407
RegenerationR6 0.965 4.74 0.03949 0.24837
RegenerationBL -0.243 4.74 0.64778 0.98510
RegenerationTP 0.201 4.74 0.72514 1.00000


Genes with expression patterns similar to MligTC455_44973

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44973 1023 21.31 Mlig455_009228

Neo: -

Age: Down-Up-Up

SC5D 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_009228 {REF} {Length: 1577} {Pfam: Fatty acid hydroxylase superfamily [PF04116.15, score=84.0]} {Human: ENSG00000109929, SC5D, sterol-C5-desaturase, [RH, Score=350, Expect=2e-121]} {Mouse: ENSMUSG00000032018, Sc5d, sterol-C5-desaturase, [RH, Score=350, Expect=2e-121]} {Dmel: FBgn0030509, CG11162, [Score=63.5, Expect=2e-11]} {Celegans: WBGene00009903, F49E12.10, [Score=58.2, Expect=9e-10]} {Smed: dd_Smed_v6_2938_0_1, dd_Smed_v6_2938_0_1, [Score=57.4, Expect=2e-09]} {RNA1509_30821, RNA1509_39296} {RNA1310_21006.1, RNA1509_30821, RNA1509_39296} {RNA1509_30821, RNA1509_39296, RNA815_7472}
2. MligTC455_22152 7067 147.22 Mlig455_016051

Neo: -

Age: -

Region-enriched R3: 1.307/0.00030

XDH 0.975 - - - 0.975 - - Mlig455_016051 {REF} {Length: 4858} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=403.3]; [2Fe-2S] binding domain [PF01799.22, score=95.5]; FAD binding domain in molybdopterin dehydrogenase [PF00941.23, score=89.0]; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain [PF01315.24, score=75.4]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.19, score=67.3]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=26.4]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=516, Expect=3e-160]; ENSG00000138356, AOX1, aldehyde oxidase 1, [Score=503, Expect=2e-155]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=521, Expect=4e-162]; ENSMUSG00000063558, Aox1, aldehyde oxidase 1, [Score=498, Expect=1e-153]} {Dmel: FBgn0038348, AOX2, Aldehyde oxidase 2, [RH, Score=674, Expect=0.0]} {Celegans: WBGene00010083, xhd-1, [Score=504, Expect=4e-156]} {RNA1509_21663, RNA1509_325, RNA1509_45555, RNA1509_9229, RNA1509_9570} {RNA1310_1603.1, RNA1509_21663, RNA1509_45555, RNA1509_9229, RNA1509_9570} {RNA1509_21663, RNA1509_45555, RNA1509_9229, RNA1509_9570, RNA815_224.2}
3. MligTC455_19033 773 16.11 Mlig455_051635, Mlig455_061999

Neo: Int S/G2/M

Age: -

KAT7 0.962 - - - - 0.962 -

Mlig455_051635 {REF} {Length: 1584} {TRANSSPLICED} {Pfam: MOZ/SAS family [PF01853.20, score=236.2]; MYST family zinc finger domain [PF17772.3, score=42.2]; Zinc finger, C2HC type [PF01530.20, score=34.8]} {Human: ENSG00000136504, KAT7, lysine acetyltransferase 7, [RH, Score=323, Expect=1e-105]} {Mouse: ENSMUSG00000038909, Kat7, K(lysine) acetyltransferase 7, [RH, Score=323, Expect=1e-106]} {Dmel: FBgn0028387, chm, chameau, [Score=290, Expect=6e-91]} {Celegans: WBGene00007029, mys-1, Histone acetyltransferase Tip60 homolog, [Score=256, Expect=1e-81]} {Smed: dd_Smed_v6_4706_1_4, dd_Smed_v6_4706_1_4, [Score=234, Expect=6e-73]} {RNA1509_35665} {RNA1310_17590} {RNA815_13639.1}

Mlig455_061999 {REF} {Length: 1584} {TRANSSPLICED} {Pfam: MOZ/SAS family [PF01853.20, score=236.2]; MYST family zinc finger domain [PF17772.3, score=42.2]; Zinc finger, C2HC type [PF01530.20, score=34.8]} {Human: ENSG00000136504, KAT7, lysine acetyltransferase 7, [RH, Score=323, Expect=1e-105]} {Mouse: ENSMUSG00000038909, Kat7, K(lysine) acetyltransferase 7, [RH, Score=323, Expect=1e-106]} {Dmel: FBgn0028387, chm, chameau, [Score=290, Expect=6e-91]} {Celegans: WBGene00007029, mys-1, Histone acetyltransferase Tip60 homolog, [Score=256, Expect=1e-81]} {Smed: dd_Smed_v6_4706_1_4, dd_Smed_v6_4706_1_4, [Score=234, Expect=6e-73]} {RNA1509_35665, RNA1509_53847} {RNA1310_17590, RNA1509_53847} {RNA1509_53847, RNA815_13639.1}
4. MligTC455_52322 6273 130.68 Mlig455_044377

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.232/0.00035

0.959 - - - - - 0.959 Mlig455_044377 {REF} {Length: 552} {TRANSSPLICED} {RNA1509_1166, RNA1509_33190} {RNA1310_59343, RNA1509_33190} {RNA1509_33190, RNA815_30321.2}
5. MligTC455_52062 742 15.45 Mlig455_031638

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.588/0.00652

0.957 - - - - - 0.957 Mlig455_031638 {REF} {Length: 1515} {Pfam: bZIP transcription factor [PF00170.23, score=20.8]; Basic region leucine zipper [PF07716.17, score=20.0]} {RNA1509_11805, RNA1509_38109, RNA1509_47057} {RNA1310_28702, RNA1509_11805, RNA1509_38109, RNA1509_47057} {RNA1509_11805, RNA1509_38109, RNA1509_47057, RNA815_19780.1}
6. MligTC455_42760 1892 39.41 Mlig455_009075, Mlig455_058106

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.413

Region-enriched R3: 1.115/0.01103

LITAF 0.95 - - - 0.950 - -

Mlig455_009075 {REF} {Length: 1925} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=83.0]} {Human: ENSG00000189067, LITAF, lipopolysaccharide induced TNF factor, [RH, Score=96.7, Expect=2e-25]} {Mouse: ENSMUSG00000022500, Litaf, LPS-induced TN factor, [RH, Score=94.7, Expect=1e-24]} {Dmel: FBgn0052280, CG32280, [Score=67.4, Expect=1e-14]} {Celegans: WBGene00009484, F36G3.3, [Score=70.1, Expect=1e-15]} {Smed: dd_Smed_v6_353_0_1, dd_Smed_v6_353_0_1, [Score=77.0, Expect=1e-18]} {RNA1509_16693, RNA1509_40787} {RNA1310_19742, RNA1509_40787} {RNA1509_40787, RNA815_7404.1}

Mlig455_058106 {REF} {Length: 2274} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=83.1]} {Human: ENSG00000189067, LITAF, lipopolysaccharide induced TNF factor, [RH, Score=96.7, Expect=2e-25]} {Mouse: ENSMUSG00000022500, Litaf, LPS-induced TN factor, [RH, Score=94.7, Expect=8e-25]} {Dmel: FBgn0052280, CG32280, [Score=67.0, Expect=1e-14]} {Celegans: WBGene00009484, F36G3.3, [Score=69.7, Expect=2e-15]} {Smed: dd_Smed_v6_353_0_1, dd_Smed_v6_353_0_1, [Score=77.0, Expect=1e-18]} {RNA1509_16693, RNA1509_20163, RNA1509_44637, RNA1509_6496} {RNA1310_19742, RNA1509_16693, RNA1509_20163, RNA1509_44637, RNA1509_6496} {RNA1509_16693, RNA1509_20163, RNA1509_44637, RNA1509_6496, RNA815_7404.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA