TomoSeq data search

Data search

Results for MligTC455_22158

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22158

19

0.40

Mlig455_016024

Neo: -

Age: Up-Down-Down

XDH

Mlig455_016024 {REF} {Length: 2564} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=130.3]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=143, Expect=2e-37]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=148, Expect=4e-41]} {Dmel: FBgn0038349, AOX3, Aldehyde oxidase 3, [Score=169, Expect=7e-47]} {Celegans: WBGene00010083, xhd-1, [Score=149, Expect=4e-40]} {RNA1509_48253} {RNA1310_3150.1} {RNA815_224.3}

Cumulative graph for MligTC455_22158

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.703	0.962	0.99997	1.00000
RegionR2	0.957	0.962	1.00000	1.00000
RegionR3	0.107	0.962	0.99997	1.00000
RegionR4	-0.809	0.962	0.99982	1.00000
RegionR5	-0.214	0.962	0.99990	1.00000
RegionR6	0.17	0.962	1.00000	1.00000
RegionR7	0.265	0.962	0.99996	1.00000
RegionR8	0.227	0.962	0.99995	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.048	0.962	0.99997	1.00000
RegenerationR2	4.276	0.962	0.00279	0.08008
RegenerationR3	4.249	0.962	0.02712	0.29600
RegenerationR4	5.552	0.962	0.00300	0.07224
RegenerationR5	4.407	0.962	0.00507	0.12929
RegenerationR6	2.846	0.962	0.16425	0.49403
RegenerationBL	0.452	0.962	0.99998	1.00000
RegenerationTP	2.839	0.962	0.34095	0.78456

Genes with expression patterns similar to MligTC455_22158

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22158	19	0.4	Mlig455_016024	Neo: - Age: Up-Down-Down	XDH	3	-	-	-	1.000	1.000	1.000	Mlig455_016024 {REF} {Length: 2564} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=130.3]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=143, Expect=2e-37]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=148, Expect=4e-41]} {Dmel: FBgn0038349, AOX3, Aldehyde oxidase 3, [Score=169, Expect=7e-47]} {Celegans: WBGene00010083, xhd-1, [Score=149, Expect=4e-40]} {RNA1509_48253} {RNA1310_3150.1} {RNA815_224.3}
2.	MligTC455_19632	59	1.22	Mlig455_042807	Neo: - Age: Up-Down-Up		1.667	-	-	-	-	0.964	0.703	Mlig455_042807 {REF} {Length: 793} {NoTransDecoderORF} {RNA1509_32813} {RNA1310_51673, RNA1509_32813} {RNA1509_32813, RNA815_25910}
3.	MligTC455_39888	14	0.29	Mlig455_045313	Neo: - Age: -		0.975	-	-	-	-	0.975	-	Mlig455_045313 {REF} {Length: 2930} {NoTransDecoderORF} {RNA1509_33890} {RNA1310_17466.1} {RNA815_54569}
4.	MligTC455_12268	21	0.44	Mlig455_020458	Neo: - Age: -		0.973	-	-	-	-	0.973	-	Mlig455_020458 {REF} {Length: 1693} {Pfam: TATA element modulatory factor 1 DNA binding [PF12329.10, score=20.4]} {RNA1509_10012, RNA1509_37655} {RNA1310_23404.1, RNA1509_10012, RNA1509_37655} {RNA1509_10012, RNA1509_37655, RNA815_8343.1}
5.	MligTC455_03759	4	0.09	Mlig455_002966	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_002966 {REF} {Length: 1114} {Pfam: Flocculin repeat [PF00624.20, score=25.2]} {RNA1310_44296} {RNA815_35577}
6.	MligTC455_07977	31	0.65	Mlig455_048040	Neo: - Age: -	CYP2U1	0.972	-	-	-	-	0.972	-	Mlig455_048040 {REF} {Length: 1352} {Pfam: Cytochrome P450 [PF00067.24, score=285.7]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=220, Expect=3e-65]; ENSG00000197838, CYP2A13, cytochrome P450 family 2 subfamily A member 13, [Score=214, Expect=2e-63]; ENSG00000255974, CYP2A6, cytochrome P450 family 2 subfamily A member 6, [Score=213, Expect=5e-63]; ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=210, Expect=6e-62]} {Mouse: ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=228, Expect=6e-69]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=222, Expect=1e-66]; ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=221, Expect=6e-66]; ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=221, Expect=6e-66]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=217, Expect=1e-64]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [Score=217, Expect=8e-65]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=202, Expect=5e-59]} {Celegans: WBGene00018260, cyp-33C7, CYtochrome P450 family, [Score=222, Expect=7e-67]} {Smed: dd_Smed_v6_3919_0_1, dd_Smed_v6_3919_0_1, [RH, Score=278, Expect=2e-88]} {RNA1509_3373} {RNA1310_14664, RNA1509_3373} {RNA1509_3373, RNA815_4893}
7.	MligTC455_35387	36	0.76	Mlig455_022493	Neo: - Age: -	STOM	0.969	-	-	-	-	0.969	-	Mlig455_022493 {REF} {Length: 3725} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=106.9]} {Human: ENSG00000148175, STOM, stomatin, [Score=318, Expect=2e-105]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [Score=318, Expect=1e-105]} {Dmel: FBgn0260657, CG42540, [Score=333, Expect=4e-110]} {Celegans: WBGene00003166, mec-2, Mechanosensory protein 2, [Score=331, Expect=1e-110]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [Score=392, Expect=4e-135]} {RNA1509_58730} {RNA1310_46627} {RNA815_48856}
8.	MligTC455_49318	15	0.31	Mlig455_041717	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_041717 {REF} {Length: 2096} {Smed: dd_Smed_v6_18585_0_1, dd_Smed_v6_18585_0_1, [RH, Score=136, Expect=7e-37]} {RNA1310_54922} {RNA815_28996}
9.	MligTC455_32723	152	3.17	Mlig455_035869, Mlig455_035908	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_035869 {REF} {Length: 726} {NoTransDecoderORF} {RNA1509_42439} {RNA1310_109566} {RNA815_11756.1} Mlig455_035908 {REF} {Length: 575} {NoTransDecoderORF} {RNA1509_42439} {RNA1310_109566} {RNA815_11756.1}
10.	MligTC455_06435	18	0.37	Mlig455_029288	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_029288 {REF} {Length: 2819} {RNA1509_41551, RNA1509_54594} {RNA1310_16315, RNA1509_54594} {RNA1509_54594, RNA815_7731}
11.	MligTC455_18978	61	1.26	Mlig455_009495	Neo: - Age: - Region-enriched R2: 4.421/0.03364		0.96	-	-	-	-	0.960	-	Mlig455_009495 {REF} {Length: 2451} {TRANSSPLICED} {Pfam: Ubiquitin-like domain [PF18036.3, score=69.2]} {RNA1509_48735} {RNA1310_34239.1} {RNA815_12180}
12.	MligTC455_03582	13	0.27	Mlig455_068363	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_068363 {REF} {Length: 1856} {RNA1509_51602} {RNA1310_82134.1} {RNA815_4325.1}
13.	MligTC455_15110	44	0.91	Mlig455_047180	Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.335		0.955	-	-	-	-	0.955	-	Mlig455_047180 {REF} {Length: 3150} {RNA1509_12062, RNA1509_1568, RNA1509_8241} {RNA1310_6375.1, RNA1509_12062, RNA1509_1568, RNA1509_8241} {RNA1509_12062, RNA1509_1568, RNA1509_8241, RNA815_2043}
14.	MligTC455_42791	29	0.6	Mlig455_024725	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_024725 {REF} {Length: 1646} {Pfam: Putative zinc-RING and/or ribbon [PF13901.8, score=27.6]} {RNA1509_34819} {RNA1310_50463.1} {RNA815_3409}
15.	MligTC455_48661	237	4.93	Mlig455_068424	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.428 Region-enriched R2: 3.510/0.00102 Region-enriched R3: 2.139/0.04340	BMP1	0.954	-	-	-	-	0.954	-	Mlig455_068424 {REF} {Length: 2174} {Pfam: CUB domain [PF00431.22, score=56.8]} {Human: ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=72.4, Expect=3e-13]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=73.2, Expect=1e-13]} {Dmel: FBgn0004885, tok, tolkin, [Score=60.1, Expect=2e-09]} {Celegans: WBGene00003555, nas-39, Zinc metalloproteinase nas-39, [Score=58.5, Expect=4e-09]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=61.2, Expect=4e-10]} {RNA1509_45794} {RNA1310_14080.1, RNA1509_45794} {RNA1509_45794, RNA815_14641.1}
16.	MligTC455_11214	227	4.72	Mlig455_041296, Mlig455_056196	Neo: Germline Age: Up-Down-Down Region-specific R4: 5.610 Region-enriched R4: 4.997/0.00000		0.95	-	-	-	-	0.950	-	Mlig455_041296 {REF} {Length: 2230} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=67.8, Expect=1e-11]; ENSMUSG00000071335, Mfsd4b3, major facilitator superfamily domain containing 4B3, [Score=64.7, Expect=8e-11]} {RNA1509_25958} {RNA1310_9369} {RNA815_37361} Mlig455_056196 {REF} {Length: 2701} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=67.8, Expect=1e-11]; ENSMUSG00000071335, Mfsd4b3, major facilitator superfamily domain containing 4B3, [Score=64.7, Expect=8e-11]} {RNA1509_25958} {RNA1310_9369, RNA1509_25958} {RNA1509_25958, RNA815_37361}
17.	MligTC455_47667	356	7.41	Mlig455_013805	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.458	SLC39A14	0.95	-	-	-	-	-	0.950	Mlig455_013805 {REF} {Length: 3049} {Pfam: ZIP Zinc transporter [PF02535.24, score=208.9]} {Human: ENSG00000104635, SLC39A14, solute carrier family 39 member 14, [Score=253, Expect=2e-78]} {Mouse: ENSMUSG00000022094, Slc39a14, solute carrier family 39 (zinc transporter), member 14, [Score=249, Expect=6e-77]} {Dmel: FBgn0036461, Zip71B, Zinc/iron regulated transporter-related protein 71B, [Score=157, Expect=6e-42]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=217, Expect=9e-66]} {Smed: dd_Smed_v6_8605_0_1, dd_Smed_v6_8605_0_1, [Score=280, Expect=3e-89]} {RNA1509_23164} {RNA1310_12163.1, RNA1509_23164} {RNA1509_23164, RNA815_4574}

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