Data search
Results for MligTC455_12268
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12268 | 21 | 0.44 | Mlig455_020458 | Neo: - Age: - |
Mlig455_020458 {REF} {Length: 1693} {Pfam: TATA element modulatory factor 1 DNA binding [PF12329.10, score=20.4]} {RNA1509_10012, RNA1509_37655} {RNA1310_23404.1, RNA1509_10012, RNA1509_37655} {RNA1509_10012, RNA1509_37655, RNA815_8343.1} |
Cumulative graph for MligTC455_12268
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.617 | 0.919 | 0.99997 | 1.00000 | |
| RegionR2 | -0.029 | 0.919 | 0.99998 | 1.00000 | |
| RegionR3 | -0.615 | 0.919 | 0.99995 | 1.00000 | |
| RegionR4 | 0.161 | 0.919 | 0.99997 | 1.00000 | |
| RegionR5 | -0.732 | 0.919 | 0.99992 | 1.00000 | |
| RegionR6 | -0.539 | 0.919 | 0.99998 | 1.00000 | |
| RegionR7 | 0.088 | 0.919 | 0.99999 | 1.00000 | |
| RegionR8 | 0.048 | 0.919 | 0.99998 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.24 | 0.919 | 1.00000 | 1.00000 | |
| RegenerationR2 | 3.639 | 0.919 | 0.01526 | 0.20252 | |
| RegenerationR3 | 4.666 | 0.919 | 0.02561 | 0.28822 | |
| RegenerationR4 | 4.536 | 0.919 | 0.02145 | 0.23262 | |
| RegenerationR5 | 2.801 | 0.919 | 0.07384 | 0.42577 | |
| RegenerationR6 | 3.585 | 0.919 | 0.08532 | 0.36566 | |
| RegenerationBL | 2.422 | 0.919 | 0.34073 | 0.70739 | |
| RegenerationTP | 3.981 | 0.919 | 0.16331 | 0.59257 |
Genes with expression patterns similar to MligTC455_12268
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12268 | 21 | 0.44 | Mlig455_020458 | Neo: - Age: - |
3 | - | - | - | 1.000 | 1.000 | 1.000 | Mlig455_020458 {REF} {Length: 1693} {Pfam: TATA element modulatory factor 1 DNA binding [PF12329.10, score=20.4]} {RNA1509_10012, RNA1509_37655} {RNA1310_23404.1, RNA1509_10012, RNA1509_37655} {RNA1509_10012, RNA1509_37655, RNA815_8343.1} | |
| 2. | MligTC455_10200 | 114 | 2.38 | Mlig455_060035 | Neo: - Age: - |
1.786 | - | - | - | 0.965 | - | 0.821 | Mlig455_060035 {REF} {Length: 4892} {RNA1509_29378, RNA1509_41981} {RNA1310_4852.2, RNA1509_41981} {RNA1509_41981, RNA815_14079} | |
| 3. | MligTC455_11214 | 227 | 4.72 | Mlig455_041296, Mlig455_056196 | Neo: Germline Age: Up-Down-Down Region-specific R4: 5.610 Region-enriched R4: 4.997/0.00000 |
1.758 | - | - | - | 0.783 | 0.975 | - | Mlig455_041296 {REF} {Length: 2230} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=67.8, Expect=1e-11]; ENSMUSG00000071335, Mfsd4b3, major facilitator superfamily domain containing 4B3, [Score=64.7, Expect=8e-11]} {RNA1509_25958} {RNA1310_9369} {RNA815_37361} Mlig455_056196 {REF} {Length: 2701} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=67.8, Expect=1e-11]; ENSMUSG00000071335, Mfsd4b3, major facilitator superfamily domain containing 4B3, [Score=64.7, Expect=8e-11]} {RNA1509_25958} {RNA1310_9369, RNA1509_25958} {RNA1509_25958, RNA815_37361} |
|
| 4. | MligTC455_19632 | 59 | 1.22 | Mlig455_042807 | Neo: - Age: Up-Down-Up |
1.738 | - | - | - | - | 0.972 | 0.766 | Mlig455_042807 {REF} {Length: 793} {NoTransDecoderORF} {RNA1509_32813} {RNA1310_51673, RNA1509_32813} {RNA1509_32813, RNA815_25910} | |
| 5. | MligTC455_07977 | 31 | 0.65 | Mlig455_048040 | Neo: - Age: - |
CYP2U1 | 1.728 | - | - | - | 0.758 | 0.970 | - | Mlig455_048040 {REF} {Length: 1352} {Pfam: Cytochrome P450 [PF00067.24, score=285.7]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=220, Expect=3e-65]; ENSG00000197838, CYP2A13, cytochrome P450 family 2 subfamily A member 13, [Score=214, Expect=2e-63]; ENSG00000255974, CYP2A6, cytochrome P450 family 2 subfamily A member 6, [Score=213, Expect=5e-63]; ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=210, Expect=6e-62]} {Mouse: ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=228, Expect=6e-69]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=222, Expect=1e-66]; ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=221, Expect=6e-66]; ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=221, Expect=6e-66]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=217, Expect=1e-64]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [Score=217, Expect=8e-65]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=202, Expect=5e-59]} {Celegans: WBGene00018260, cyp-33C7, CYtochrome P450 family, [Score=222, Expect=7e-67]} {Smed: dd_Smed_v6_3919_0_1, dd_Smed_v6_3919_0_1, [RH, Score=278, Expect=2e-88]} {RNA1509_3373} {RNA1310_14664, RNA1509_3373} {RNA1509_3373, RNA815_4893} |
| 6. | MligTC455_03582 | 13 | 0.27 | Mlig455_068363 | Neo: - Age: - |
0.977 | - | - | - | - | 0.977 | - | Mlig455_068363 {REF} {Length: 1856} {RNA1509_51602} {RNA1310_82134.1} {RNA815_4325.1} | |
| 7. | MligTC455_22158 | 19 | 0.4 | Mlig455_016024 | Neo: - Age: Up-Down-Down |
XDH | 0.973 | - | - | - | - | 0.973 | - | Mlig455_016024 {REF} {Length: 2564} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=130.3]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=143, Expect=2e-37]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=148, Expect=4e-41]} {Dmel: FBgn0038349, AOX3, Aldehyde oxidase 3, [Score=169, Expect=7e-47]} {Celegans: WBGene00010083, xhd-1, [Score=149, Expect=4e-40]} {RNA1509_48253} {RNA1310_3150.1} {RNA815_224.3} |
| 8. | MligTC455_25029 | 26 | 0.54 | Mlig455_061269 | Neo: - Age: - |
RFC3 | 0.973 | - | - | - | 0.973 | - | - | Mlig455_061269 {REF} {Length: 2494} {TRANSSPLICED} {Pfam: DNA polymerase III, delta subunit [PF13177.8, score=42.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=36.2]; Rad17 P-loop domain [PF03215.17, score=27.0]; AAA ATPase domain [PF13191.8, score=26.1]; DNA polymerase III, delta subunit [PF06144.15, score=25.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=19.6]} {Human: ENSG00000133119, RFC3, replication factor C subunit 3, [RH, Score=493, Expect=7e-176]} {Mouse: ENSMUSG00000033970, Rfc3, replication factor C (activator 1) 3, [RH, Score=499, Expect=4e-178]} {Dmel: FBgn0028700, RfC38, Replication factor C 38kD subunit, [RH, Score=481, Expect=3e-171]} {Celegans: WBGene00004339, rfc-3, RFC (DNA replication factor) family, [RH, Score=368, Expect=5e-127]} {Smed: dd_Smed_v6_9695_0_1, dd_Smed_v6_9695_0_1, [RH, Score=447, Expect=4e-158]} {RNA1509_12650} {RNA1310_19461.1} {RNA815_9346} |
| 9. | MligTC455_39888 | 14 | 0.29 | Mlig455_045313 | Neo: - Age: - |
0.973 | - | - | - | - | 0.973 | - | Mlig455_045313 {REF} {Length: 2930} {NoTransDecoderORF} {RNA1509_33890} {RNA1310_17466.1} {RNA815_54569} | |
| 10. | MligTC455_06337 | 14 | 0.3 | Mlig455_061691 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_061691 {REF} {Length: 444} {Pfam: Ribosomal protein S31e [PF17067.7, score=19.5]} {RNA1509_37248} {RNA1310_104355} {RNA815_20899} | |
| 11. | MligTC455_39114 | 173 | 3.6 | Mlig455_069991 | Neo: - |
NOTCH1 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_069991 {REF} {Length: 2929} {Pfam: EGF-like domain [PF00008.29, score=21.7]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=58.2, Expect=7e-08]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=62.8, Expect=2e-09]; ENSMUSG00000038146, Notch3, notch 3, [Score=62.0, Expect=3e-09]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=62.0, Expect=3e-09]} {Dmel: FBgn0013733, shot, short stop, [Score=57.8, Expect=5e-08]} {Smed: dd_Smed_v6_4789_0_1, dd_Smed_v6_4789_0_1, [Score=49.3, Expect=1e-05]} {RNA1509_19091} {RNA1310_14363.1} {RNA815_3356.1} |
| 12. | MligTC455_51087 | 29 | 0.6 | Mlig455_057838 | Neo: - Age: - |
0.968 | - | - | - | 0.968 | - | - | Mlig455_057838 {REF} {Length: 1771} {Pfam: Transcriptional regulator [PF01709.22, score=117.4]} {Celegans: WBGene00021757, taco-1, Translational Activator of Cytochrome c Oxidase, [RH, Score=78.2, Expect=1e-16]} {Smed: dd_Smed_v6_2722_0_1, dd_Smed_v6_2722_0_1, [RH, Score=118, Expect=2e-31]} {RNA1509_54641} {RNA1310_11469} {RNA815_7775} | |
| 13. | MligTC455_05630 | 8 | 0.17 | Mlig455_053410 | Neo: - Age: - |
0.966 | - | - | - | - | 0.966 | - | Mlig455_053410 {REF} {Length: 226} {NoTransDecoderORF} | |
| 14. | MligTC455_22181 | 42 | 0.87 | Mlig455_015815 | Neo: - Age: - |
SIM1 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_015815 {REF} {Length: 3132} {Pfam: PAS domain [PF14598.8, score=70.8]; PAS fold [PF08447.14, score=64.5]; PAS fold [PF00989.27, score=54.6]; PAS fold [PF08448.12, score=35.4]; PAS domain [PF13426.9, score=24.5]; Helix-loop-helix DNA-binding domain [PF00010.28, score=20.5]} {Human: ENSG00000112246, SIM1, SIM bHLH transcription factor 1, [Score=295, Expect=1e-89]; ENSG00000159263, SIM2, SIM bHLH transcription factor 2, [Score=289, Expect=2e-88]} {Mouse: ENSMUSG00000062713, Sim2, single-minded family bHLH transcription factor 2, [Score=297, Expect=9e-95]; ENSMUSG00000019913, Sim1, single-minded family bHLH transcription factor 1, [Score=294, Expect=2e-89]} {Dmel: FBgn0004666, sim, single-minded, [Score=251, Expect=3e-74]} {Celegans: WBGene00011327, hlh-34, Helix-loop-helix 34, [Score=102, Expect=1e-23]} {Smed: dd_Smed_v6_17731_0_1, dd_Smed_v6_17731_0_1, [Score=279, Expect=5e-85]} {RNA1509_48399} {RNA1310_29071, RNA1509_48399} {RNA1509_48399, RNA815_28494} |
| 15. | MligTC455_49318 | 15 | 0.31 | Mlig455_041717 | Neo: - Age: - |
0.965 | - | - | - | - | 0.965 | - | Mlig455_041717 {REF} {Length: 2096} {Smed: dd_Smed_v6_18585_0_1, dd_Smed_v6_18585_0_1, [RH, Score=136, Expect=7e-37]} {RNA1310_54922} {RNA815_28996} | |
| 16. | MligTC455_30179 | 55 | 1.15 | Mlig455_009164 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_009164 {REF} {Length: 2127} {Pfam: Mab-21 protein [PF03281.16, score=40.2]} {RNA1509_48615} {RNA1310_1764.1} {RNA815_3668.1} | |
| 17. | MligTC455_19909 | 8 | 0.17 | Mlig455_038522 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_038522 {REF} {Length: 1397} {RNA1509_31739} {RNA1310_85224} {RNA815_11524} | |
| 18. | MligTC455_39814 | 17 | 0.35 | Mlig455_051814 | Neo: - Age: - |
0.959 | - | - | - | 0.959 | - | - | Mlig455_051814 {REF} {Length: 1986} {NoTransDecoderORF} {RNA1310_67241} {RNA815_26250.1} | |
| 19. | MligTC455_51737 | 49 | 1.01 | Mlig455_060275 | Neo: Germline Age: logFC(26M/2M)=-0.968 Region-enriched R4: 3.321/0.01433 |
HFM1 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_060275 {REF} {Length: 5261} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=79.5]; Sec63 Brl domain [PF02889.18, score=67.8]; Helicase conserved C-terminal domain [PF00271.33, score=34.2]; Type III restriction enzyme, res subunit [PF04851.17, score=33.2]; Helix-hairpin-helix domain [PF14520.8, score=22.6]} {Human: ENSG00000162669, HFM1, HFM1, ATP dependent DNA helicase homolog, [RH, Score=571, Expect=3e-177]} {Mouse: ENSMUSG00000043410, Hfm1, HFM1, ATP-dependent DNA helicase homolog, [RH, Score=568, Expect=1e-176]} {Dmel: FBgn0263599, l(3)72Ab, lethal (3) 72Ab, [Score=280, Expect=5e-76]} {Celegans: WBGene00012896, snrp-200, Putative U5 small nuclear ribonucleoprotein 200 kDa helicase, [Score=265, Expect=2e-71]} {Smed: dd_Smed_v6_24408_0_1, dd_Smed_v6_24408_0_1, [RH, Score=448, Expect=5e-135]} {RNA1509_54934} {RNA1310_43917, RNA1509_54934} {RNA1509_54934, RNA815_48120} |
| 20. | MligTC455_10615 | 26 | 0.55 | Mlig455_025293 | Neo: - Age: Up-Down-Down Region-enriched R8: 6.139/0.01501 Regeneration-downregulated R4: -2.694 Regeneration-depleted R4: -2.694 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_025293 {REF} {Length: 1557} {NoTransDecoderORF} {RNA1509_5193} {RNA1310_42887} {RNA815_311} | |
| 21. | MligTC455_24120 | 187 | 3.9 | Mlig455_058994 | Neo: Irradiation Age: - Region-specific R4: 5.890 Region-enriched R4: 4.246/0.00045 |
KREMEN2 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_058994 {REF} {Length: 1786} {TRANSSPLICED} {Pfam: WSC domain [PF01822.21, score=44.6]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=53.1, Expect=2e-08]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=50.4, Expect=9e-08]} {RNA1509_52786} {RNA1310_23094} {RNA815_14870.1} |
| 22. | MligTC455_23830 | 29 | 0.61 | Mlig455_047403 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_047403 {REF} {Length: 5000} {Pfam: Winged helix-turn helix [PF13551.8, score=24.8]; Homeodomain-like domain [PF13384.8, score=23.6]; DDE superfamily endonuclease [PF13358.8, score=23.3]; Helix-turn-helix domain of resolvase [PF02796.17, score=20.2]; Helix-turn-helix domain [PF13518.8, score=19.6]} {RNA1509_54215} {RNA1310_52309} {RNA815_49809} |
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