Data search
Results for MligTC455_22167
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22167 | 1124 | 23.42 | Mlig455_053478 | Neo: Int S/G2/M Age: Down-Up-Up |
OSGEP | Mlig455_053478 {REF} {Length: 1151} {TRANSSPLICED} {Pfam: tRNA N6-adenosine threonylcarbamoyltransferase [PF00814.27, score=284.4]} {Human: ENSG00000092094, OSGEP, O-sialoglycoprotein endopeptidase, [RH, Score=526, Expect=0.0]} {Mouse: ENSMUSG00000006289, Osgep, O-sialoglycoprotein endopeptidase, [RH, Score=520, Expect=0.0]} {Dmel: FBgn0283681, Tcs3, [RH, Score=487, Expect=3e-174]} {Celegans: WBGene00022166, Y71H2AM.1, Probable tRNA N6-adenosine threonylcarbamoyltransferase, [RH, Score=463, Expect=7e-165]} {Smed: dd_Smed_v6_3150_0_1, dd_Smed_v6_3150_0_1, [RH, Score=494, Expect=2e-177]} {RNA1509_6538} {RNA1310_17345.2} {RNA815_14057} |
Cumulative graph for MligTC455_22167
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.13 | 4.782 | 0.86087 | 1.00000 | |
| RegionR2 | -0.217 | 4.782 | 0.52716 | 0.89922 | |
| RegionR3 | -0.431 | 4.782 | 0.13589 | 0.63062 | |
| RegionR4 | -0.192 | 4.782 | 0.54197 | 0.86405 | |
| RegionR5 | 0.806 | 4.782 | 0.00055 | 0.00641 | |
| RegionR6 | 0.238 | 4.782 | 0.38805 | 0.96382 | |
| RegionR7 | -0.097 | 4.782 | 0.80113 | 1.00000 | |
| RegionR8 | -0.236 | 4.782 | 0.63541 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.248 | 4.782 | 0.28952 | 0.98735 | |
| RegenerationR2 | -0.029 | 4.782 | 0.92069 | 1.00000 | |
| RegenerationR3 | 0.601 | 4.782 | 0.05761 | 0.41201 | |
| RegenerationR4 | 0.659 | 4.782 | 0.03094 | 0.28418 | |
| RegenerationR5 | 0.162 | 4.782 | 0.53658 | 0.87766 | |
| RegenerationR6 | -0.191 | 4.782 | 0.54322 | 0.83473 | |
| RegenerationBL | -0.428 | 4.782 | 0.31171 | 0.67727 | |
| RegenerationTP | 0.535 | 4.782 | 0.19511 | 0.63409 |
Genes with expression patterns similar to MligTC455_22167
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_22167 | 1124 | 23.42 | Mlig455_053478 | Neo: Int S/G2/M Age: Down-Up-Up |
OSGEP | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_053478 {REF} {Length: 1151} {TRANSSPLICED} {Pfam: tRNA N6-adenosine threonylcarbamoyltransferase [PF00814.27, score=284.4]} {Human: ENSG00000092094, OSGEP, O-sialoglycoprotein endopeptidase, [RH, Score=526, Expect=0.0]} {Mouse: ENSMUSG00000006289, Osgep, O-sialoglycoprotein endopeptidase, [RH, Score=520, Expect=0.0]} {Dmel: FBgn0283681, Tcs3, [RH, Score=487, Expect=3e-174]} {Celegans: WBGene00022166, Y71H2AM.1, Probable tRNA N6-adenosine threonylcarbamoyltransferase, [RH, Score=463, Expect=7e-165]} {Smed: dd_Smed_v6_3150_0_1, dd_Smed_v6_3150_0_1, [RH, Score=494, Expect=2e-177]} {RNA1509_6538} {RNA1310_17345.2} {RNA815_14057} |
| 2. | MligTC455_35515 | 2398 | 49.95 | Mlig455_034939 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.231/0.00000 |
KARS | 2.499 | 0.806 | - | 0.954 | - | - | 0.739 | Mlig455_034939 {REF} {Length: 3649} {Pfam: tRNA synthetases class II (D, K and N) [PF00152.22, score=261.5]; OB-fold nucleic acid binding domain [PF01336.27, score=50.4]; tRNA synthetases class II core domain (F) [PF01409.22, score=34.0]} {Human: ENSG00000065427, KARS, lysyl-tRNA synthetase, [RH, Score=773, Expect=0.0]} {Mouse: ENSMUSG00000031948, Kars, lysyl-tRNA synthetase, [RH, Score=781, Expect=0.0]} {Dmel: FBgn0027084, LysRS, Lysyl-tRNA synthetase, [RH, Score=728, Expect=0.0]} {Celegans: WBGene00002238, kars-1, Lysine--tRNA ligase, [RH, Score=726, Expect=0.0]} {Smed: dd_Smed_v6_1118_0_1, dd_Smed_v6_1118_0_1, [RH, Score=702, Expect=0.0]} {RNA1509_2595, RNA1509_46665, RNA1509_46914, RNA1509_7494} {RNA1310_12688, RNA1509_2595, RNA1509_46665, RNA1509_46914, RNA1509_7494} {RNA1509_2595, RNA1509_46665, RNA1509_46914, RNA1509_7494, RNA815_4471} |
| 3. | MligTC455_21396 | 337 | 7.03 | Mlig455_036844 | Neo: - Age: Down-Up-Up |
TAF4 | 1.757 | - | - | - | 0.952 | - | 0.805 | Mlig455_036844 {REF} {Length: 3934} {TRANSSPLICED} {Pfam: Transcription initiation factor TFIID component TAF4 family [PF05236.16, score=129.4]; NHR1 homology to TAF [PF07531.16, score=41.8]} {Human: ENSG00000130699, TAF4, TATA-box binding protein associated factor 4, [RH, Score=143, Expect=2e-35]; ENSG00000141384, TAF4B, TATA-box binding protein associated factor 4b, [RH, Score=142, Expect=4e-35]; ENSG00000280529, TAF4, TATA-box binding protein associated factor 4, [RH, Score=142, Expect=2e-36]} {Mouse: ENSMUSG00000039117, Taf4, TATA-box binding protein associated factor 4, [RH, Score=144, Expect=1e-35]} {Dmel: FBgn0010280, Taf4, TBP-associated factor 4, [RH, Score=111, Expect=4e-25]} {Celegans: WBGene00006385, taf-4, TAF (TBP-associated transcription factor) family, [RH, Score=67.8, Expect=9e-12]} {Smed: dd_Smed_v6_9560_0_1, dd_Smed_v6_9560_0_1, [RH, Score=90.1, Expect=5e-19]} {RNA1509_12245} {RNA1310_5227} {RNA815_18740} |
| 4. | MligTC455_43556 | 1329 | 27.68 | Mlig455_019873 | Neo: Germline Age: - Region-enriched R4: 1.160/0.01537 |
CHPT1 | 1.706 | - | - | - | 0.737 | - | 0.969 | Mlig455_019873 {REF} {Length: 2772} {TRANSSPLICED} {Pfam: CDP-alcohol phosphatidyltransferase [PF01066.23, score=64.7]} {Human: ENSG00000111666, CHPT1, choline phosphotransferase 1, [RH, Score=291, Expect=3e-95]; ENSG00000134255, CEPT1, choline/ethanolamine phosphotransferase 1, [RH, Score=288, Expect=1e-93]} {Mouse: ENSMUSG00000040774, Cept1, choline/ethanolaminephosphotransferase 1, [RH, Score=289, Expect=4e-94]; ENSMUSG00000060002, Chpt1, choline phosphotransferase 1, [RH, Score=282, Expect=8e-92]} {Dmel: FBgn0033844, bbc, bb in a boxcar, [RH, Score=278, Expect=5e-90]} {Celegans: WBGene00013024, cept-2, Choline/EthanolaminePhosphoTransferase, [RH, Score=270, Expect=9e-87]} {Smed: dd_Smed_v6_7722_0_1, dd_Smed_v6_7722_0_1, [RH, Score=317, Expect=2e-105]} {RNA1509_13871, RNA1509_37902, RNA1509_9172} {RNA1310_15462.1, RNA1509_13871, RNA1509_37902, RNA1509_9172} {RNA1509_13871, RNA1509_37902, RNA1509_9172, RNA815_5861} |
| 5. | MligTC455_20575 | 2489 | 51.86 | Mlig455_010487 | Neo: Neoblast Age: - |
EIF4E | 0.97 | - | - | - | 0.970 | - | - | Mlig455_010487 {REF} {Length: 2367} {TRANSSPLICED} {Pfam: Eukaryotic initiation factor 4E [PF01652.20, score=185.0]} {Human: ENSG00000151247, EIF4E, eukaryotic translation initiation factor 4E, [RH, Score=234, Expect=1e-77]; ENSG00000175766, EIF4E1B, eukaryotic translation initiation factor 4E family member 1B, [RH, Score=223, Expect=5e-73]} {Mouse: ENSMUSG00000028156, Eif4e, eukaryotic translation initiation factor 4E, [RH, Score=236, Expect=1e-78]} {Dmel: FBgn0015218, eIF4E1, eukaryotic translation initiation factor 4E1, [RH, Score=206, Expect=2e-66]} {Celegans: WBGene00002061, ife-3, Eukaryotic translation initiation factor 4E-3, [RH, Score=200, Expect=2e-64]} {Smed: dd_Smed_v6_2919_0_1, dd_Smed_v6_2919_0_1, [RH, Score=204, Expect=2e-66]} {RNA1509_13706, RNA1509_14597, RNA1509_17505, RNA1509_25796, RNA1509_37319} {RNA1310_12589.1, RNA1509_13706, RNA1509_14597, RNA1509_17505, RNA1509_37319} {RNA1509_13706, RNA1509_14597, RNA1509_17505, RNA1509_37319, RNA815_3294.1} |
| 6. | MligTC455_54092 | 500 | 10.42 | Mlig455_014913 | Neo: - Age: logFC(26M/2M)=-0.647 Region-enriched R5: 1.838/0.03698 |
RPE | 0.963 | - | - | - | - | - | 0.963 | Mlig455_014913 {REF} {Length: 1168} {TRANSSPLICED} {Pfam: Ribulose-phosphate 3 epimerase family [PF00834.21, score=200.0]; Quinolinate phosphoribosyl transferase, C-terminal domain [PF01729.21, score=19.0]} {Human: ENSG00000197713, RPE, ribulose-5-phosphate-3-epimerase, [RH, Score=259, Expect=5e-87]} {Mouse: ENSMUSG00000026005, Rpe, ribulose-5-phosphate-3-epimerase, [RH, Score=261, Expect=5e-88]} {Dmel: FBgn0050499, CG30499, [RH, Score=237, Expect=9e-79]} {Celegans: WBGene00017272, F08F8.7, Ribulose-phosphate 3-epimerase, [RH, Score=233, Expect=3e-77]} {Smed: dd_Smed_v6_6342_0_1, dd_Smed_v6_6342_0_1, [RH, Score=265, Expect=4e-90]} {RNA1509_17010} {RNA1310_29573.1, RNA1509_17010} {RNA1509_17010, RNA815_14616} |
| 7. | MligTC455_24057 | 1295 | 26.97 | Mlig455_065274 | Neo: - Age: - |
NDUFS1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_065274 {REF} {Length: 2813} {TRANSSPLICED} {Pfam: Molybdopterin oxidoreductase [PF00384.24, score=206.1]; 2Fe-2S iron-sulfur cluster binding domain [PF13510.8, score=69.7]; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region [PF10588.11, score=56.4]; NADH-ubiquinone oxidoreductase subunit G, C-terminal [PF09326.13, score=55.9]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=31.5]} {Human: ENSG00000023228, NDUFS1, NADH:ubiquinone oxidoreductase core subunit S1, [RH, Score=953, Expect=0.0]; ENSG00000283447, NDUFS1, NADH:ubiquinone oxidoreductase core subunit S1, [RH, Score=953, Expect=0.0]} {Mouse: ENSMUSG00000025968, Ndufs1, NADH:ubiquinone oxidoreductase core subunit S1, [RH, Score=943, Expect=0.0]} {Dmel: FBgn0017566, ND-75, NADH dehydrogenase (ubiquinone) 75 kDa subunit, [RH, Score=895, Expect=0.0]} {Celegans: WBGene00021562, nuo-5, NADH Ubiquinone Oxidoreductase, [RH, Score=825, Expect=0.0]} {Smed: dd_Smed_v6_2402_0_1, dd_Smed_v6_2402_0_1, [RH, Score=928, Expect=0.0]} {RNA1509_1870, RNA1509_32096, RNA1509_43626, RNA1509_8925} {RNA1310_6597, RNA1509_1870, RNA1509_32096, RNA1509_43626, RNA1509_8925} {RNA1509_1870, RNA1509_32096, RNA1509_43626, RNA1509_8925, RNA815_1467.1} |
Berezikov Lab - 2020-2021 © ERIBA