Data search


search
Exact
Search

Results for MligTC455_43556

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43556 1329 27.68 Mlig455_019873

Neo: Germline

Age: -

Region-enriched R4: 1.160/0.01537

CHPT1 Mlig455_019873 {REF} {Length: 2772} {TRANSSPLICED} {Pfam: CDP-alcohol phosphatidyltransferase [PF01066.23, score=64.7]} {Human: ENSG00000111666, CHPT1, choline phosphotransferase 1, [RH, Score=291, Expect=3e-95]; ENSG00000134255, CEPT1, choline/ethanolamine phosphotransferase 1, [RH, Score=288, Expect=1e-93]} {Mouse: ENSMUSG00000040774, Cept1, choline/ethanolaminephosphotransferase 1, [RH, Score=289, Expect=4e-94]; ENSMUSG00000060002, Chpt1, choline phosphotransferase 1, [RH, Score=282, Expect=8e-92]} {Dmel: FBgn0033844, bbc, bb in a boxcar, [RH, Score=278, Expect=5e-90]} {Celegans: WBGene00013024, cept-2, Choline/EthanolaminePhosphoTransferase, [RH, Score=270, Expect=9e-87]} {Smed: dd_Smed_v6_7722_0_1, dd_Smed_v6_7722_0_1, [RH, Score=317, Expect=2e-105]} {RNA1509_13871, RNA1509_37902, RNA1509_9172} {RNA1310_15462.1, RNA1509_13871, RNA1509_37902, RNA1509_9172} {RNA1509_13871, RNA1509_37902, RNA1509_9172, RNA815_5861}

Cumulative graph for MligTC455_43556

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.799 5.055 0.26441 0.91401
RegionR2 -0.68 5.055 0.10398 0.39758
RegionR3 -0.095 5.055 0.77490 1.00000
RegionR4 1.16 5.055 0.00165 0.01537
RegionR5 0.612 5.055 0.03364 0.14080
RegionR6 0.195 5.055 0.54847 1.00000
RegionR7 -1.581 5.055 0.00109 0.03706
RegionR8 -0.412 5.055 0.42710 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.398 5.055 0.69285 1.00000
RegenerationR2 0.058 5.055 0.88488 1.00000
RegenerationR3 -0.208 5.055 0.61268 0.91384
RegenerationR4 -0.802 5.055 0.04377 0.33722
RegenerationR5 0.051 5.055 0.88701 1.00000
RegenerationR6 -0.021 5.055 0.95763 1.00000
RegenerationBL 0.374 5.055 0.43888 0.80632
RegenerationTP 0.528 5.055 0.31776 0.76294


Genes with expression patterns similar to MligTC455_43556

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43556 1329 27.68 Mlig455_019873

Neo: Germline

Age: -

Region-enriched R4: 1.160/0.01537

CHPT1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_019873 {REF} {Length: 2772} {TRANSSPLICED} {Pfam: CDP-alcohol phosphatidyltransferase [PF01066.23, score=64.7]} {Human: ENSG00000111666, CHPT1, choline phosphotransferase 1, [RH, Score=291, Expect=3e-95]; ENSG00000134255, CEPT1, choline/ethanolamine phosphotransferase 1, [RH, Score=288, Expect=1e-93]} {Mouse: ENSMUSG00000040774, Cept1, choline/ethanolaminephosphotransferase 1, [RH, Score=289, Expect=4e-94]; ENSMUSG00000060002, Chpt1, choline phosphotransferase 1, [RH, Score=282, Expect=8e-92]} {Dmel: FBgn0033844, bbc, bb in a boxcar, [RH, Score=278, Expect=5e-90]} {Celegans: WBGene00013024, cept-2, Choline/EthanolaminePhosphoTransferase, [RH, Score=270, Expect=9e-87]} {Smed: dd_Smed_v6_7722_0_1, dd_Smed_v6_7722_0_1, [RH, Score=317, Expect=2e-105]} {RNA1509_13871, RNA1509_37902, RNA1509_9172} {RNA1310_15462.1, RNA1509_13871, RNA1509_37902, RNA1509_9172} {RNA1509_13871, RNA1509_37902, RNA1509_9172, RNA815_5861}
2. MligTC455_19705 2157 44.94 Mlig455_018234, Mlig455_018244

Neo: -

Age: -

Region-enriched R5: 1.158/0.00021

ETNK1 2.709 - - 0.852 0.950 - 0.907

Mlig455_018234 {REF} {Length: 2420} {TRANSSPLICED} {Pfam: Choline/ethanolamine kinase [PF01633.22, score=158.2]; Phosphotransferase enzyme family [PF01636.25, score=42.6]} {Human: ENSG00000139163, ETNK1, ethanolamine kinase 1, [RH, Score=293, Expect=2e-95]} {Mouse: ENSMUSG00000030275, Etnk1, ethanolamine kinase 1, [RH, Score=290, Expect=6e-96]; ENSMUSG00000070644, Etnk2, ethanolamine kinase 2, [RH, Score=282, Expect=2e-92]} {Dmel: FBgn0000536, eas, easily shocked, [RH, Score=273, Expect=1e-87]} {Celegans: WBGene00000515, ckc-1, Choline Kinase C, [RH, Score=210, Expect=4e-65]} {Smed: dd_Smed_v6_10949_0_1, dd_Smed_v6_10949_0_1, [RH, Score=255, Expect=9e-83]} {RNA1509_15602, RNA1509_26179, RNA1509_30660, RNA1509_37975, RNA1509_56920} {RNA1310_14674, RNA1509_15602, RNA1509_26179, RNA1509_30660, RNA1509_37975, RNA1509_56920} {RNA1509_15602, RNA1509_26179, RNA1509_30660, RNA1509_37975, RNA1509_56920, RNA815_6221.1}

Mlig455_018244 {REF} {Length: 2137} {TRANSSPLICED} {Pfam: Choline/ethanolamine kinase [PF01633.22, score=155.8]; Phosphotransferase enzyme family [PF01636.25, score=39.7]} {Human: ENSG00000139163, ETNK1, ethanolamine kinase 1, [RH, Score=289, Expect=6e-94]} {Mouse: ENSMUSG00000030275, Etnk1, ethanolamine kinase 1, [RH, Score=290, Expect=8e-96]; ENSMUSG00000070644, Etnk2, ethanolamine kinase 2, [RH, Score=280, Expect=2e-91]} {Dmel: FBgn0000536, eas, easily shocked, [RH, Score=270, Expect=2e-86]} {Celegans: WBGene00000515, ckc-1, Choline Kinase C, [RH, Score=207, Expect=5e-64]} {Smed: dd_Smed_v6_10949_0_1, dd_Smed_v6_10949_0_1, [RH, Score=252, Expect=2e-81]} {RNA1509_37975} {RNA1310_14674} {RNA815_6221.1}
3. MligTC455_50640 710 14.79 Mlig455_070140

Neo: Neoblast, stringent

Age: -

Regeneration-enriched R6: 2.423
Regeneration-enriched R3: 1.960
Regeneration-enriched R2: 1.682

SSRP1 1.75 - 0.793 - 0.957 - - Mlig455_070140 {REF} {Length: 5104} {TRANSSPLICED} {Pfam: POB3-like N-terminal PH domain [PF17292.4, score=81.9]; Histone chaperone Rttp106-like [PF08512.14, score=81.6]; Structure-specific recognition protein (SSRP1) [PF03531.16, score=79.0]; HMG (high mobility group) box [PF00505.21, score=75.4]; HMG-box domain [PF09011.12, score=54.7]; YABBY protein [PF04690.15, score=19.7]} {Human: ENSG00000149136, SSRP1, structure specific recognition protein 1, [RH, Score=549, Expect=0.0]} {Mouse: ENSMUSG00000027067, Ssrp1, structure specific recognition protein 1, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0010278, Ssrp, Structure specific recognition protein, [RH, Score=439, Expect=2e-143]} {Celegans: WBGene00001973, hmg-3, FACT complex subunit ssrp1-B, [RH, Score=374, Expect=1e-118]} {Smed: dd_Smed_v6_3904_0_1, dd_Smed_v6_3904_0_1, [RH, Score=301, Expect=2e-93]} {RNA1509_3392, RNA1509_52219} {RNA1310_9322, RNA1509_52219} {RNA1509_52219, RNA815_4568}
4. MligTC455_22167 1124 23.42 Mlig455_053478

Neo: Int S/G2/M

Age: Down-Up-Up

OSGEP 1.706 - - - 0.737 - 0.969 Mlig455_053478 {REF} {Length: 1151} {TRANSSPLICED} {Pfam: tRNA N6-adenosine threonylcarbamoyltransferase [PF00814.27, score=284.4]} {Human: ENSG00000092094, OSGEP, O-sialoglycoprotein endopeptidase, [RH, Score=526, Expect=0.0]} {Mouse: ENSMUSG00000006289, Osgep, O-sialoglycoprotein endopeptidase, [RH, Score=520, Expect=0.0]} {Dmel: FBgn0283681, Tcs3, [RH, Score=487, Expect=3e-174]} {Celegans: WBGene00022166, Y71H2AM.1, Probable tRNA N6-adenosine threonylcarbamoyltransferase, [RH, Score=463, Expect=7e-165]} {Smed: dd_Smed_v6_3150_0_1, dd_Smed_v6_3150_0_1, [RH, Score=494, Expect=2e-177]} {RNA1509_6538} {RNA1310_17345.2} {RNA815_14057}
5. MligTC455_52102 1330 27.71 Mlig455_057904

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.393

Region-specific R5: 1.922

Region-enriched R5: 1.819/0.00000

1.674 - - - 0.722 0.952 - Mlig455_057904 {REF} {Length: 1172} {Pfam: COMM domain [PF07258.16, score=26.3]} {Smed: dd_Smed_v6_1358_0_1, dd_Smed_v6_1358_0_1, [RH, Score=77.8, Expect=1e-17]} {RNA1509_14982} {RNA1310_9877, RNA1509_14982} {RNA1509_14982, RNA815_15500.1}
6. MligTC455_25462 963 20.06 Mlig455_017947

Neo: -

Age: -

ACOX3 0.975 - - - - 0.975 - Mlig455_017947 {REF} {Length: 2624} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=52.8]; Acyl-CoA oxidase [PF01756.21, score=47.3]; Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=34.3]} {Human: ENSG00000087008, ACOX3, acyl-CoA oxidase 3, pristanoyl, [Score=277, Expect=3e-83]} {Mouse: ENSMUSG00000029098, Acox3, acyl-Coenzyme A oxidase 3, pristanoyl, [Score=292, Expect=2e-89]} {Dmel: FBgn0031813, CG9527, [Score=220, Expect=1e-62]} {Celegans: WBGene00019060, acox-3, Acyl-coenzyme A oxidase, [Score=202, Expect=2e-56]} {Smed: dd_Smed_v6_3270_0_1, dd_Smed_v6_3270_0_1, [RH, Score=644, Expect=0.0]} {RNA1509_3517} {RNA1310_12756.1} {RNA815_4520}
7. MligTC455_30821 152 3.16 Mlig455_037011

Neo: -

Age: logFC(26M/2M)=0.420

Region-enriched R4: 2.497/0.04454

0.959 - - - 0.959 - - Mlig455_037011 {REF} {Length: 2435} {RNA1509_41127} {RNA1310_36587.1} {RNA815_7423}
8. MligTC455_44517 292 6.09 Mlig455_024107, Mlig455_063981

Neo: -

Age: logFC(26M/2M)=0.810

ANKK1, ASB3 0.959 - - - 0.959 - -

Mlig455_024107 {REF} {Length: 1903} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=68.9]; Ankyrin repeats (many copies) [PF13637.8, score=59.0]; Ankyrin repeat [PF00023.32, score=56.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=49.7]; Ankyrin repeats (many copies) [PF13857.8, score=40.3]; Ankyrin repeat [PF13606.8, score=34.3]} {Human: ENSG00000170209, ANKK1, ankyrin repeat and kinase domain containing 1, [Score=63.9, Expect=1e-10]; ENSG00000270898, GPR75-ASB3, GPR75-ASB3 readthrough, [Score=62.8, Expect=2e-10]; ENSG00000115239, ASB3, ankyrin repeat and SOCS box containing 3, [Score=62.8, Expect=2e-10]} {Mouse: ENSMUSG00000032257, Ankk1, ankyrin repeat and kinase domain containing 1, [Score=61.6, Expect=5e-10]; ENSMUSG00000063932, Poteg, POTE ankyrin domain family, member G, [Score=59.7, Expect=1e-09]} {Dmel: FBgn0086442, mib2, mind bomb 2, [Score=70.9, Expect=3e-13]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=55.5, Expect=2e-08]} {Smed: dd_Smed_v6_1704_0_1, dd_Smed_v6_1704_0_1, [Score=84.0, Expect=7e-18]} {RNA1310_17433.1} {RNA815_7006.1}

Mlig455_063981 {REF} {Length: 1678} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=86.3]; Ankyrin repeat [PF00023.32, score=56.5]; Ankyrin repeats (many copies) [PF13637.8, score=55.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=48.2]; Ankyrin repeats (many copies) [PF13857.8, score=39.6]; Ankyrin repeat [PF13606.8, score=32.2]; Prokaryotic RING finger family 4 [PF14447.8, score=18.4]} {Human: ENSG00000115239, ASB3, ankyrin repeat and SOCS box containing 3, [Score=60.8, Expect=1e-09]; ENSG00000270898, GPR75-ASB3, GPR75-ASB3 readthrough, [Score=60.5, Expect=1e-09]; ENSG00000170209, ANKK1, ankyrin repeat and kinase domain containing 1, [Score=60.5, Expect=2e-09]; ENSG00000029534, ANK1, ankyrin 1, [Score=60.1, Expect=2e-09]} {Mouse: ENSMUSG00000032257, Ankk1, ankyrin repeat and kinase domain containing 1, [Score=57.8, Expect=8e-09]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=57.8, Expect=7e-09]; ENSMUSG00000020305, Asb3, ankyrin repeat and SOCS box-containing 3, [Score=56.6, Expect=1e-08]; ENSMUSG00000063932, Poteg, POTE ankyrin domain family, member G, [Score=56.6, Expect=1e-08]; ENSMUSG00000024294, Mib1, mindbomb E3 ubiquitin protein ligase 1, [Score=56.2, Expect=2e-08]; ENSMUSG00000036333, Kidins220, kinase D-interacting substrate 220, [Score=55.8, Expect=4e-08]} {Dmel: FBgn0086442, mib2, mind bomb 2, [Score=70.1, Expect=5e-13]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=54.7, Expect=5e-08]} {Smed: dd_Smed_v6_1704_0_1, dd_Smed_v6_1704_0_1, [Score=82.4, Expect=2e-17]} {RNA1310_17433.1} {RNA815_7006.1}
9. MligTC455_46687 550 11.46 Mlig455_053230, Mlig455_065057

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.429

MAP3K19 0.956 - - - 0.956 - -

Mlig455_053230 {REF} {Length: 2458} {Pfam: Protein kinase domain [PF00069.27, score=169.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=139.3]; Ankyrin repeats (many copies) [PF13637.8, score=38.0]; Ankyrin repeats (3 copies) [PF12796.9, score=34.6]; Fungal protein kinase [PF17667.3, score=26.9]; Ankyrin repeat [PF13606.8, score=22.3]; ABC1 atypical kinase-like domain [PF03109.18, score=20.7]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=147, Expect=3e-36]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=150, Expect=3e-37]} {Dmel: FBgn0035001, Slik, Sterile20-like kinase, [Score=140, Expect=2e-34]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=125, Expect=1e-29]} {Smed: dd_Smed_v6_2030_0_9, dd_Smed_v6_2030_0_9, [Score=132, Expect=4e-33]} {RNA1509_11461} {RNA1310_9478.1} {RNA815_3045}

Mlig455_065057 {REF} {Length: 2585} {Pfam: Protein kinase domain [PF00069.27, score=169.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=139.1]; Ankyrin repeats (many copies) [PF13637.8, score=35.3]; Ankyrin repeats (3 copies) [PF12796.9, score=33.8]; Fungal protein kinase [PF17667.3, score=26.8]; Ankyrin repeat [PF13606.8, score=21.8]; ABC1 atypical kinase-like domain [PF03109.18, score=20.4]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=146, Expect=7e-36]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=149, Expect=7e-38]} {Dmel: FBgn0035001, Slik, Sterile20-like kinase, [Score=140, Expect=4e-34]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=125, Expect=1e-29]} {Smed: dd_Smed_v6_2030_0_11, dd_Smed_v6_2030_0_11, [Score=132, Expect=4e-33]} {RNA1509_11461} {RNA1310_9478.1, RNA1509_11461} {RNA1509_11461, RNA815_3045}
10. MligTC455_54079 12019 250.4 Mlig455_012949, Mlig455_012959

Neo: Int S/G2/M

Age: -

PSMD12 0.953 - - - - 0.953 -

Mlig455_012949 {REF} {Length: 1819} {Pfam: PCI domain [PF01399.29, score=54.3]; 26S proteasome regulatory subunit RPN5 C-terminal domain [PF18098.3, score=46.3]} {Human: ENSG00000197170, PSMD12, proteasome 26S subunit, non-ATPase 12, [RH, Score=431, Expect=2e-148]} {Mouse: ENSMUSG00000020720, Psmd12, proteasome (prosome, macropain) 26S subunit, non-ATPase, 12, [RH, Score=433, Expect=2e-149]} {Dmel: FBgn0028690, Rpn5, Regulatory particle non-ATPase 5, [RH, Score=260, Expect=1e-81]} {Celegans: WBGene00004461, rpn-5, Proteasome Regulatory Particle, Non-ATPase-like, [RH, Score=298, Expect=1e-96]} {Smed: dd_Smed_v6_2546_0_1, dd_Smed_v6_2546_0_1, [RH, Score=361, Expect=1e-121]} {RNA1509_13071, RNA1509_1594, RNA1509_20902} {RNA1310_16976, RNA1509_13071, RNA1509_1594, RNA1509_20902} {RNA1509_13071, RNA1509_1594, RNA1509_20902, RNA815_6594}

Mlig455_012959 {REF} {Length: 1913} {Pfam: PCI domain [PF01399.29, score=51.7]; 26S proteasome regulatory subunit RPN5 C-terminal domain [PF18098.3, score=46.3]} {Human: ENSG00000197170, PSMD12, proteasome 26S subunit, non-ATPase 12, [RH, Score=431, Expect=1e-148]} {Mouse: ENSMUSG00000020720, Psmd12, proteasome (prosome, macropain) 26S subunit, non-ATPase, 12, [RH, Score=435, Expect=3e-150]} {Dmel: FBgn0028690, Rpn5, Regulatory particle non-ATPase 5, [RH, Score=262, Expect=2e-82]} {Celegans: WBGene00004461, rpn-5, Proteasome Regulatory Particle, Non-ATPase-like, [RH, Score=299, Expect=5e-97]} {Smed: dd_Smed_v6_2546_0_1, dd_Smed_v6_2546_0_1, [RH, Score=362, Expect=4e-122]} {RNA1509_1594} {RNA1310_16976} {RNA815_6594}
11. MligTC455_15613 850 17.7 Mlig455_053952, Mlig455_060629

Neo: -

Age: -

GOLT1A 0.952 - - - - - 0.952

Mlig455_053952 {REF} {Length: 892} {NoTransDecoderORF} {RNA1509_27476} {RNA1310_24296.1} {RNA815_10473}

Mlig455_060629 {REF} {Length: 1087} {TRANSSPLICED} {Pfam: Got1/Sft2-like family [PF04178.14, score=58.3]} {Human: ENSG00000174567, GOLT1A, golgi transport 1A, [RH, Score=120, Expect=9e-36]} {Mouse: ENSMUSG00000098306, Gm28040, predicted gene, 28040, [RH, Score=125, Expect=6e-38]; ENSMUSG00000103421, Golt1a, golgi transport 1A, [RH, Score=125, Expect=6e-38]} {Dmel: FBgn0052576, CG32576, [RH, Score=132, Expect=2e-40]} {Celegans: WBGene00018270, F41C3.4, Probable Golgi transport protein 1, [RH, Score=114, Expect=2e-33]} {Smed: dd_Smed_v6_5105_0_1, dd_Smed_v6_5105_0_1, [RH, Score=139, Expect=3e-43]} {RNA1509_24282} {RNA1310_24296.1} {RNA815_10473}
12. MligTC455_40950 450 9.38 Mlig455_062491

Neo: -

Age: -

Regeneration-downregulated R4: -2.281

Regeneration-depleted R4: -2.281

PSMC2 0.951 - - - 0.951 - - Mlig455_062491 {REF} {Length: 1831} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=56.9]; AAA+ lid domain [PF17862.3, score=38.3]} {Human: ENSG00000161057, PSMC2, proteasome 26S subunit, ATPase 2, [Score=289, Expect=4e-97]} {Mouse: ENSMUSG00000028932, Psmc2, proteasome (prosome, macropain) 26S subunit, ATPase 2, [Score=289, Expect=8e-97]} {Dmel: FBgn0028687, Rpt1, Regulatory particle triple-A ATPase 1, [Score=281, Expect=1e-94]} {Celegans: WBGene00004501, rpt-1, 26S protease regulatory subunit 7, [Score=273, Expect=3e-91]} {Smed: dd_Smed_v6_2686_0_1, dd_Smed_v6_2686_0_1, [Score=283, Expect=1e-95]} {RNA1509_10462, RNA1509_16452, RNA1509_37677} {RNA1310_16139, RNA1509_16452, RNA1509_37677} {RNA1509_16452, RNA1509_37677, RNA815_6045}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA