M. lignano Tomo-Seq
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Results for MligTC455_22245

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22245 602 12.55 Mlig455_028498

Neo: -

Age: -

 HIVEP2 Mlig455_028498 {REF} {Length: 5628} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=73.9]; C2H2-type zinc finger [PF13894.8, score=48.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=48.2]; Zinc-finger of C2H2 type [PF12874.9, score=36.2]; Zinc-finger double domain [PF13465.8, score=27.0]; Putative actin-like family [PF17003.7, score=25.9]; C2H2-type zinc-finger domain [PF13909.8, score=23.7]} {Human: ENSG00000010818, HIVEP2, human immunodeficiency virus type I enhancer binding protein 2, [RH, Score=157, Expect=1e-37]; ENSG00000127124, HIVEP3, human immunodeficiency virus type I enhancer binding protein 3, [RH, Score=151, Expect=6e-36]; ENSG00000095951, HIVEP1, human immunodeficiency virus type I enhancer binding protein 1, [RH, Score=150, Expect=9e-36]} {Mouse: ENSMUSG00000015501, Hivep2, human immunodeficiency virus type I enhancer binding protein 2, [RH, Score=155, Expect=2e-37]; ENSMUSG00000021366, Hivep1, human immunodeficiency virus type I enhancer binding protein 1, [RH, Score=151, Expect=3e-36]; ENSMUSG00000028634, Hivep3, human immunodeficiency virus type I enhancer binding protein 3, [RH, Score=150, Expect=8e-36]} {Dmel: FBgn0003396, shn, schnurri, [RH, Score=141, Expect=3e-33]} {Celegans: WBGene00004862, sma-9, SMA-9 class IIb; SMAll, [RH, Score=120, Expect=8e-27]} {Smed: dd_Smed_v6_4708_0_1, dd_Smed_v6_4708_0_1, [RH, Score=114, Expect=3e-25]} {RNA1509_1757} {RNA1310_639} {RNA815_9962}

Cumulative graph for MligTC455_22245

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.782 4.001 0.16468 0.78875
RegionR2 0.711 4.001 0.09700 0.38237
RegionR3 -0.447 4.001 0.25670 0.80104
RegionR4 -0.333 4.001 0.41166 0.73876
RegionR5 0.309 4.001 0.31327 0.65243
RegionR6 0.103 4.001 0.77902 1.00000
RegionR7 0.761 4.001 0.10660 0.62032
RegionR8 0.678 4.001 0.27284 0.89585

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.413 4.001 0.31416 1.00000
RegenerationR2 0.234 4.001 0.42662 0.83205
RegenerationR3 0.522 4.001 0.15676 0.58805
RegenerationR4 0.121 4.001 0.72624 0.96334
RegenerationR5 -0.068 4.001 0.81834 0.99404
RegenerationR6 0.911 4.001 0.00763 0.10705
RegenerationBL -0.369 4.001 0.44864 0.81561
RegenerationTP -0.43 4.001 0.40647 0.83411


Genes with expression patterns similar to MligTC455_22245

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22245 602 12.55 Mlig455_028498

Neo: -

Age: -

 HIVEP2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_028498 {REF} {Length: 5628} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=73.9]; C2H2-type zinc finger [PF13894.8, score=48.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=48.2]; Zinc-finger of C2H2 type [PF12874.9, score=36.2]; Zinc-finger double domain [PF13465.8, score=27.0]; Putative actin-like family [PF17003.7, score=25.9]; C2H2-type zinc-finger domain [PF13909.8, score=23.7]} {Human: ENSG00000010818, HIVEP2, human immunodeficiency virus type I enhancer binding protein 2, [RH, Score=157, Expect=1e-37]; ENSG00000127124, HIVEP3, human immunodeficiency virus type I enhancer binding protein 3, [RH, Score=151, Expect=6e-36]; ENSG00000095951, HIVEP1, human immunodeficiency virus type I enhancer binding protein 1, [RH, Score=150, Expect=9e-36]} {Mouse: ENSMUSG00000015501, Hivep2, human immunodeficiency virus type I enhancer binding protein 2, [RH, Score=155, Expect=2e-37]; ENSMUSG00000021366, Hivep1, human immunodeficiency virus type I enhancer binding protein 1, [RH, Score=151, Expect=3e-36]; ENSMUSG00000028634, Hivep3, human immunodeficiency virus type I enhancer binding protein 3, [RH, Score=150, Expect=8e-36]} {Dmel: FBgn0003396, shn, schnurri, [RH, Score=141, Expect=3e-33]} {Celegans: WBGene00004862, sma-9, SMA-9 class IIb; SMAll, [RH, Score=120, Expect=8e-27]} {Smed: dd_Smed_v6_4708_0_1, dd_Smed_v6_4708_0_1, [RH, Score=114, Expect=3e-25]} {RNA1509_1757} {RNA1310_639} {RNA815_9962}
2. MligTC455_22244 709 14.77 Mlig455_028474

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.304

 HIVEP2 5.654 0.843 0.952 0.958 0.987 0.974 0.940 Mlig455_028474 {REF} {Length: 8097} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=77.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=48.1]; C2H2-type zinc finger [PF13894.8, score=47.9]; Zinc-finger of C2H2 type [PF12874.9, score=35.7]; Zinc-finger double domain [PF13465.8, score=26.9]; Putative actin-like family [PF17003.7, score=26.3]; C2H2-type zinc-finger domain [PF13909.8, score=23.1]} {Human: ENSG00000010818, HIVEP2, human immunodeficiency virus type I enhancer binding protein 2, [RH, Score=157, Expect=1e-37]; ENSG00000127124, HIVEP3, human immunodeficiency virus type I enhancer binding protein 3, [RH, Score=151, Expect=5e-36]; ENSG00000095951, HIVEP1, human immunodeficiency virus type I enhancer binding protein 1, [RH, Score=150, Expect=9e-36]} {Mouse: ENSMUSG00000015501, Hivep2, human immunodeficiency virus type I enhancer binding protein 2, [RH, Score=156, Expect=2e-37]; ENSMUSG00000021366, Hivep1, human immunodeficiency virus type I enhancer binding protein 1, [RH, Score=151, Expect=4e-36]; ENSMUSG00000028634, Hivep3, human immunodeficiency virus type I enhancer binding protein 3, [RH, Score=150, Expect=7e-36]} {Dmel: FBgn0003396, shn, schnurri, [RH, Score=141, Expect=3e-33]} {Celegans: WBGene00004862, sma-9, SMA-9 class IIb; SMAll, [RH, Score=120, Expect=9e-27]} {Smed: dd_Smed_v6_4708_0_1, dd_Smed_v6_4708_0_1, [RH, Score=114, Expect=3e-25]} {RNA1509_1757} {RNA1310_639} {RNA815_9962}
3. MligTC455_14038 196 4.08 Mlig455_069252

Neo: -

Age: logFC(26M/2M)=-0.497

 0.953 - - - - 0.953 - Mlig455_069252 {REF} {Length: 1750} {RNA1509_33444} {RNA1310_16640} {RNA815_5282}

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