Data search
Results for MligTC455_22421
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22421 | 29 | 0.60 | Mlig455_011582 | Neo: Int S/G2/M Age: - |
Mlig455_011582 {REF} {Length: 639} {NoTransDecoderORF} {RNA1310_72808} {RNA815_44140} |
Cumulative graph for MligTC455_22421
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.585 | 1.109 | 1.00000 | 1.00000 | |
| RegionR2 | 4.428 | 1.109 | 0.02370 | 0.17120 | |
| RegionR3 | 0.145 | 1.109 | 0.84916 | 1.00000 | |
| RegionR4 | -2.627 | 1.109 | 0.99985 | 1.00000 | |
| RegionR5 | -0.19 | 1.109 | 0.97440 | 1.00000 | |
| RegionR6 | 1.127 | 1.109 | 0.47817 | 1.00000 | |
| RegionR7 | 2.025 | 1.109 | 0.29283 | 0.92708 | |
| RegionR8 | -0.324 | 1.109 | 0.84484 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.38 | 1.109 | 0.97992 | 1.00000 | |
| RegenerationR2 | 1.505 | 1.109 | 0.24822 | 0.69499 | |
| RegenerationR3 | 3.518 | 1.109 | 0.01227 | 0.20360 | |
| RegenerationR4 | 1.07 | 1.109 | 0.31791 | 0.75649 | |
| RegenerationR5 | 1.4 | 1.109 | 0.14533 | 0.56104 | |
| RegenerationR6 | 0.916 | 1.109 | 0.48868 | 0.79825 | |
| RegenerationBL | -1.382 | 1.109 | 1.00000 | 1.00000 | |
| RegenerationTP | 1.068 | 1.109 | 0.69319 | 1.00000 |
Genes with expression patterns similar to MligTC455_22421
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_22421 | 29 | 0.6 | Mlig455_011582 | Neo: Int S/G2/M Age: - |
3 | 1.000 | 1.000 | - | - | 1.000 | - | Mlig455_011582 {REF} {Length: 639} {NoTransDecoderORF} {RNA1310_72808} {RNA815_44140} | |
| 2. | MligTC455_48696 | 89 | 1.86 | Mlig455_008457 | Neo: - Age: logFC(26M/2M)=2.804 |
0.985 | - | - | - | - | 0.985 | - | Mlig455_008457 {REF} {Length: 1584} {RNA1509_5317} {RNA1310_34053} {RNA815_19081} | |
| 3. | MligTC455_47214 | 194 | 4.05 | Mlig455_054363 | Neo: - Age: Down-Up-Up |
MACF1 | 0.974 | - | - | - | - | 0.974 | - | Mlig455_054363 {REF} {Length: 2010} {Human: ENSG00000127603, MACF1, microtubule-actin crosslinking factor 1, [Score=53.5, Expect=1e-06]} {Celegans: WBGene00000123, ama-1, DNA-directed RNA polymerase II subunit RPB1, [Score=48.5, Expect=1e-05]} {RNA1509_21325} {RNA1310_9087} {RNA815_6838} |
| 4. | MligTC455_14464 | 38 | 0.79 | Mlig455_052668 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_052668 {REF} {Length: 340} {RNA1509_36365} {RNA1310_19238} {RNA815_10291} | |
| 5. | MligTC455_52595 | 29 | 0.59 | Mlig455_066185 | Neo: - |
COPB1 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_066185 {REF} {Length: 5666} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=360.2]; Coatomer beta C-terminal region [PF07718.14, score=182.5]; Coatomer beta subunit appendage platform [PF14806.8, score=153.2]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.3]; PDZ domain [PF17820.3, score=32.6]; PDZ domain [PF00595.26, score=32.4]; HEAT repeats [PF13646.8, score=27.1]; HEAT repeat [PF02985.24, score=20.9]; HEAT-like repeat [PF13513.8, score=19.6]} {Human: ENSG00000129083, COPB1, coatomer protein complex subunit beta 1, [RH, Score=1267, Expect=0.0]} {Mouse: ENSMUSG00000030754, Copb1, coatomer protein complex, subunit beta 1, [RH, Score=1270, Expect=0.0]} {Dmel: FBgn0008635, betaCOP, Coat Protein (coatomer) beta, [RH, Score=1166, Expect=0.0]} {Celegans: WBGene00021292, copb-1, Coatomer subunit beta, [RH, Score=1066, Expect=0.0]} {Smed: dd_Smed_v6_1208_0_1, dd_Smed_v6_1208_0_1, [RH, Score=1132, Expect=0.0]} {RNA1509_1298} {RNA1310_2383} {RNA815_1794} |
| 6. | MligTC455_25260 | 76 | 1.58 | Mlig455_021242 | Neo: - Age: Down-Down-Up |
TMEM30B | 0.953 | - | - | - | - | 0.953 | - | Mlig455_021242 {REF} {Length: 2318} {TRANSSPLICED} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=285.5]} {Human: ENSG00000182107, TMEM30B, transmembrane protein 30B, [RH, Score=261, Expect=8e-83]} {Mouse: ENSMUSG00000034435, Tmem30b, transmembrane protein 30B, [RH, Score=253, Expect=5e-80]; ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [RH, Score=243, Expect=4e-76]} {Dmel: FBgn0030752, CG9947, [RH, Score=302, Expect=3e-99]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [RH, Score=288, Expect=8e-94]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=293, Expect=4e-96]} {RNA1509_54431} {RNA1310_19947} {RNA815_8261.1} |
| 7. | MligTC455_07956 | 24 | 0.5 | Mlig455_013490 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_013490 {REF} {Length: 669} {NoTransDecoderORF} {RNA1310_81987} {RNA815_26162} | |
| 8. | MligTC455_07584 | 12 | 0.26 | Mlig455_004930 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_004930 {REF} {Length: 958} {NoTransDecoderORF} {RNA1310_118817} |
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