Data search
Results for MligTC455_07584
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_07584 | 12 | 0.26 | Mlig455_004930 | Neo: - Age: - |
Mlig455_004930 {REF} {Length: 958} {NoTransDecoderORF} {RNA1310_118817} |
Cumulative graph for MligTC455_07584
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.578 | 0.714 | 1.00000 | 1.00000 | |
| RegionR2 | -0.005 | 0.714 | 1.00000 | 1.00000 | |
| RegionR3 | -0.221 | 0.714 | 1.00000 | 1.00000 | |
| RegionR4 | 1.714 | 0.714 | 0.30006 | 0.61275 | |
| RegionR5 | -0.419 | 0.714 | 0.99993 | 1.00000 | |
| RegionR6 | -0.345 | 0.714 | 1.00000 | 1.00000 | |
| RegionR7 | -0.152 | 0.714 | 0.99998 | 1.00000 | |
| RegionR8 | 0.005 | 0.714 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.078 | 0.714 | 0.99993 | 1.00000 | |
| RegenerationR2 | 3.12 | 0.714 | 0.33116 | 0.76807 | |
| RegenerationR3 | 2.728 | 0.714 | 0.49292 | 0.85506 | |
| RegenerationR4 | 0.246 | 0.714 | 0.78449 | 0.98235 | |
| RegenerationR5 | -0.156 | 0.714 | 0.99990 | 1.00000 | |
| RegenerationR6 | 3.507 | 0.714 | 0.34805 | 0.69325 | |
| RegenerationBL | -0.331 | 0.714 | 0.99998 | 1.00000 | |
| RegenerationTP | -0.193 | 0.714 | 0.99998 | 1.00000 |
Genes with expression patterns similar to MligTC455_07584
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_07584 | 12 | 0.26 | Mlig455_004930 | Neo: - Age: - |
2 | - | - | - | 1.000 | 1.000 | - | Mlig455_004930 {REF} {Length: 958} {NoTransDecoderORF} {RNA1310_118817} | |
| 2. | MligTC455_16736 | 14 | 0.3 | Mlig455_049515 | Neo: - Age: - |
0.977 | - | - | - | - | 0.977 | - | Mlig455_049515 {REF} {Length: 1012} {NoTransDecoderORF} {RNA1509_54585} {RNA1310_55558} {RNA815_33420} | |
| 3. | MligTC455_30179 | 55 | 1.15 | Mlig455_009164 | Neo: - Age: - |
0.975 | - | - | - | - | 0.975 | - | Mlig455_009164 {REF} {Length: 2127} {Pfam: Mab-21 protein [PF03281.16, score=40.2]} {RNA1509_48615} {RNA1310_1764.1} {RNA815_3668.1} | |
| 4. | MligTC455_09379 | 6 | 0.13 | Mlig455_014546 | Neo: - Age: - |
0.967 | - | - | - | - | 0.967 | - | Mlig455_014546 {REF} {Length: 98} {NoTransDecoderORF} {RNA1310_115277} | |
| 5. | MligTC455_06337 | 14 | 0.3 | Mlig455_061691 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_061691 {REF} {Length: 444} {Pfam: Ribosomal protein S31e [PF17067.7, score=19.5]} {RNA1509_37248} {RNA1310_104355} {RNA815_20899} | |
| 6. | MligTC455_11995 | 76 | 1.59 | Mlig455_057583 | Neo: Germline Age: - |
CELF3 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_057583 {REF} {Length: 1910} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=167.1]; RNA recognition motif [PF16367.7, score=23.8]} {Human: ENSG00000159409, CELF3, CUGBP Elav-like family member 3, [RH, Score=400, Expect=8e-136]; ENSG00000161082, CELF5, CUGBP Elav-like family member 5, [RH, Score=395, Expect=1e-133]; ENSG00000273025, AC009690.3, novel transcript, [RH, Score=382, Expect=2e-128]; ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [RH, Score=382, Expect=2e-128]} {Mouse: ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [RH, Score=399, Expect=1e-134]; ENSMUSG00000024268, Celf4, CUGBP, Elav-like family member 4, [RH, Score=394, Expect=1e-132]; ENSMUSG00000032297, Celf6, CUGBP, Elav-like family member 6, [RH, Score=380, Expect=6e-128]} {Dmel: FBgn0000114, bru1, bruno 1, [RH, Score=322, Expect=1e-101]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [Score=252, Expect=2e-78]} {Smed: dd_Smed_v6_14010_0_2, dd_Smed_v6_14010_0_2, [RH, Score=399, Expect=8e-135]} {RNA1509_28732} {RNA1310_41106} {RNA815_33683} |
| 7. | MligTC455_05630 | 8 | 0.17 | Mlig455_053410 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_053410 {REF} {Length: 226} {NoTransDecoderORF} | |
| 8. | MligTC455_10615 | 26 | 0.55 | Mlig455_025293 | Neo: - Age: Up-Down-Down Region-enriched R8: 6.139/0.01501 Regeneration-downregulated R4: -2.694 Regeneration-depleted R4: -2.694 |
0.962 | - | - | - | - | 0.962 | - | Mlig455_025293 {REF} {Length: 1557} {NoTransDecoderORF} {RNA1509_5193} {RNA1310_42887} {RNA815_311} | |
| 9. | MligTC455_49932 | 27 | 0.57 | Mlig455_067660 | Neo: - Age: - Region-enriched R2: 5.207/0.00812 |
0.96 | - | - | - | - | 0.960 | - | Mlig455_067660 {REF} {Length: 2168} {RNA1310_116606} | |
| 10. | MligTC455_11214 | 227 | 4.72 | Mlig455_041296, Mlig455_056196 | Neo: Germline Age: Up-Down-Down Region-specific R4: 5.610 Region-enriched R4: 4.997/0.00000 |
0.959 | - | - | - | - | 0.959 | - | Mlig455_041296 {REF} {Length: 2230} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=67.8, Expect=1e-11]; ENSMUSG00000071335, Mfsd4b3, major facilitator superfamily domain containing 4B3, [Score=64.7, Expect=8e-11]} {RNA1509_25958} {RNA1310_9369} {RNA815_37361} Mlig455_056196 {REF} {Length: 2701} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=67.8, Expect=1e-11]; ENSMUSG00000071335, Mfsd4b3, major facilitator superfamily domain containing 4B3, [Score=64.7, Expect=8e-11]} {RNA1509_25958} {RNA1310_9369, RNA1509_25958} {RNA1509_25958, RNA815_37361} |
|
| 11. | MligTC455_14793 | 8 | 0.16 | Mlig455_016259 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_016259 {REF} {Length: 2544} {RNA1310_68010} | |
| 12. | MligTC455_15154 | 10 | 0.21 | Mlig455_045569 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_045569 {REF} {Length: 607} {NoTransDecoderORF} {RNA1509_37050} {RNA1310_20485} {RNA815_10188} | |
| 13. | MligTC455_52595 | 29 | 0.59 | Mlig455_066185 | Neo: - |
COPB1 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_066185 {REF} {Length: 5666} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=360.2]; Coatomer beta C-terminal region [PF07718.14, score=182.5]; Coatomer beta subunit appendage platform [PF14806.8, score=153.2]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.3]; PDZ domain [PF17820.3, score=32.6]; PDZ domain [PF00595.26, score=32.4]; HEAT repeats [PF13646.8, score=27.1]; HEAT repeat [PF02985.24, score=20.9]; HEAT-like repeat [PF13513.8, score=19.6]} {Human: ENSG00000129083, COPB1, coatomer protein complex subunit beta 1, [RH, Score=1267, Expect=0.0]} {Mouse: ENSMUSG00000030754, Copb1, coatomer protein complex, subunit beta 1, [RH, Score=1270, Expect=0.0]} {Dmel: FBgn0008635, betaCOP, Coat Protein (coatomer) beta, [RH, Score=1166, Expect=0.0]} {Celegans: WBGene00021292, copb-1, Coatomer subunit beta, [RH, Score=1066, Expect=0.0]} {Smed: dd_Smed_v6_1208_0_1, dd_Smed_v6_1208_0_1, [RH, Score=1132, Expect=0.0]} {RNA1509_1298} {RNA1310_2383} {RNA815_1794} |
| 14. | MligTC455_19632 | 59 | 1.22 | Mlig455_042807 | Neo: - Age: Up-Down-Up |
0.954 | - | - | - | - | 0.954 | - | Mlig455_042807 {REF} {Length: 793} {NoTransDecoderORF} {RNA1509_32813} {RNA1310_51673, RNA1509_32813} {RNA1509_32813, RNA815_25910} | |
| 15. | MligTC455_33126 | 12 | 0.26 | Mlig455_063485 | Neo: - Age: Up-Down-Up |
0.953 | - | - | - | - | 0.953 | - | Mlig455_063485 {REF} {Length: 3443} {RNA1310_42450} {RNA815_37067} | |
| 16. | MligTC455_22421 | 29 | 0.6 | Mlig455_011582 | Neo: Int S/G2/M Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_011582 {REF} {Length: 639} {NoTransDecoderORF} {RNA1310_72808} {RNA815_44140} |
Berezikov Lab - 2020-2021 © ERIBA