Data search


search
Exact
Search

Results for MligTC455_22536

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22536 129 2.70 Mlig455_016888

Neo: -

Age: -

Mlig455_016888 {REF} {Length: 1079} {RNA1509_50526} {RNA1310_65793.1} {RNA815_39534}

Cumulative graph for MligTC455_22536

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.609 2.099 0.38775 1.00000
RegionR2 0.89 2.099 0.29390 0.68237
RegionR3 -0.405 2.099 0.58713 1.00000
RegionR4 -1.457 2.099 0.08674 0.27955
RegionR5 -1.803 2.099 0.01377 0.07323
RegionR6 -0.342 2.099 0.65169 1.00000
RegionR7 -0.837 2.099 0.53163 1.00000
RegionR8 2.344 2.099 0.03351 0.35945

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.718 2.099 0.18028 0.92306
RegenerationR2 -0.031 2.099 0.93876 1.00000
RegenerationR3 0.117 2.099 0.90145 1.00000
RegenerationR4 -1.175 2.099 0.17936 0.61889
RegenerationR5 1.656 2.099 0.02930 0.28799
RegenerationR6 0.554 2.099 0.48361 0.79411
RegenerationBL -0.589 2.099 0.58095 0.93295
RegenerationTP -0.153 2.099 0.89460 1.00000


Genes with expression patterns similar to MligTC455_22536

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22536 129 2.7 Mlig455_016888

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_016888 {REF} {Length: 1079} {RNA1509_50526} {RNA1310_65793.1} {RNA815_39534}
2. MligTC455_40245 125 2.61 Mlig455_045020

Neo: -

Age: -

Region-enriched R8: 2.724/0.00842

1.692 0.962 - - - 0.730 - Mlig455_045020 {REF} {Length: 4797} {RNA1509_7608} {RNA1310_23716} {RNA815_45025.1}
3. MligTC455_49373 49 1.03 Mlig455_000061

Neo: -

Age: -

ECT2 1.673 - - - - 0.714 0.959 Mlig455_000061 {REF} {Length: 2785} {Pfam: RhoGEF domain [PF00621.22, score=121.5]; ZIP Zinc transporter [PF02535.24, score=20.6]} {Human: ENSG00000114346, ECT2, epithelial cell transforming 2, [Score=72.8, Expect=2e-13]} {Mouse: ENSMUSG00000027699, Ect2, ect2 oncogene, [Score=72.8, Expect=1e-13]} {Dmel: FBgn0262562, CG43102, [Score=77.4, Expect=3e-15]} {Celegans: WBGene00002297, ect-2, ECT2 (Mammalian Rho GEF) homolog, [Score=58.9, Expect=2e-09]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=52.8, Expect=2e-07]} {RNA1509_60002} {RNA1310_20791, RNA1509_60002} {RNA1509_60002, RNA815_13312}
4. MligTC455_15540 90 1.87 Mlig455_004018

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.706

SYT7 0.977 0.977 - - - - - Mlig455_004018 {REF} {Length: 2288} {Pfam: C2 domain [PF00168.32, score=65.8]} {Human: ENSG00000011347, SYT7, synaptotagmin 7, [Score=109, Expect=3e-26]; ENSG00000143858, SYT2, synaptotagmin 2, [Score=107, Expect=2e-25]; ENSG00000067715, SYT1, synaptotagmin 1, [Score=105, Expect=1e-24]} {Mouse: ENSMUSG00000026452, Syt2, synaptotagmin II, [Score=107, Expect=1e-25]; ENSMUSG00000035864, Syt1, synaptotagmin I, [Score=105, Expect=1e-24]; ENSMUSG00000027849, Syt6, synaptotagmin VI, [Score=104, Expect=1e-24]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=110, Expect=1e-26]} {Celegans: WBGene00004926, snt-6, SyNapTotagmin, [Score=117, Expect=1e-29]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=104, Expect=4e-25]} {RNA1509_38256} {RNA1310_13836} {RNA815_4752.1}
5. MligTC455_16216 158 3.3 Mlig455_068299

Neo: -

Age: logFC(26M/2M)=0.459

AXIN2 0.973 - - - - - 0.973 Mlig455_068299 {REF} {Length: 5180} {TRANSSPLICED} {Pfam: DIX domain [PF00778.19, score=84.1]; Regulator of G protein signaling domain [PF00615.21, score=28.6]} {Human: ENSG00000168646, AXIN2, axin 2, [Score=129, Expect=2e-30]} {Mouse: ENSMUSG00000000142, Axin2, axin 2, [Score=110, Expect=1e-24]} {Dmel: FBgn0026597, Axn, Axin, [RH, Score=68.9, Expect=1e-11]} {Smed: dd_Smed_v6_4900_0_1, dd_Smed_v6_4900_0_1, [RH, Score=114, Expect=2e-26]} {RNA1509_26666, RNA1509_46700} {RNA1310_18759, RNA1509_46700} {RNA1509_46700, RNA815_19659}
6. MligTC455_47365 162 3.38 Mlig455_060241

Neo: -

Age: -

0.97 - - - - - 0.970 Mlig455_060241 {REF} {Length: 2435} {TRANSSPLICED} {RNA1509_52272} {RNA1310_20010.2, RNA1509_52272} {RNA1509_52272, RNA815_28545}
7. MligTC455_48103 628 13.08 Mlig455_057218

Neo: -

Age: Up-Up-Down

RGS22 0.969 0.969 - - - - - Mlig455_057218 {REF} {Length: 3461} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=26.0]} {Human: ENSG00000132554, RGS22, regulator of G protein signaling 22, [RH, Score=72.4, Expect=3e-12]} {Mouse: ENSMUSG00000037627, Rgs22, regulator of G-protein signalling 22, [RH, Score=56.6, Expect=1e-07]} {Smed: dd_Smed_v6_11778_0_1, dd_Smed_v6_11778_0_1, [Score=246, Expect=4e-68]} {RNA1509_2536} {RNA1310_3477} {RNA815_616.1}
8. MligTC455_49370 145 3.03 Mlig455_060093

Neo: -

Age: -

PCDH11X 0.96 0.960 - - - - - Mlig455_060093 {REF} {Length: 4724} {Pfam: Cadherin domain [PF00028.19, score=308.1]; Cadherin-like [PF16184.7, score=37.0]; Cadherin-like [PF08266.14, score=22.9]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=299, Expect=3e-84]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=296, Expect=4e-83]; ENSG00000184226, PCDH9, protocadherin 9, [Score=289, Expect=4e-81]; ENSG00000166341, DCHS1, dachsous cadherin-related 1, [Score=285, Expect=7e-79]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [RH, Score=301, Expect=6e-85]} {Dmel: FBgn0284247, ds, dachsous, [Score=278, Expect=1e-76]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=191, Expect=5e-49]} {Smed: dd_Smed_v6_8478_0_1, dd_Smed_v6_8478_0_1, [RH, Score=427, Expect=5e-134]} {RNA1509_15753} {RNA1310_2027.1} {RNA815_4427}
9. MligTC455_07212 41 0.85 Mlig455_020125

Neo: -

Age: -

0.959 0.959 - - - - - Mlig455_020125 {REF} {Length: 949} {TRANSSPLICED} {RNA1509_32443, RNA1509_51241} {RNA1310_24373, RNA1509_32443, RNA1509_51241} {RNA1509_32443, RNA1509_51241, RNA815_57461}
10. MligTC455_36660 82 1.72 Mlig455_013558

Neo: -

Age: -

TUBGCP4 0.957 - - - - - 0.957 Mlig455_013558 {REF} {Length: 2841} {TRANSSPLICED} {Pfam: Gamma tubulin complex component N-terminal [PF17681.3, score=180.8]; Gamma tubulin complex component C-terminal [PF04130.15, score=173.9]} {Human: ENSG00000137822, TUBGCP4, tubulin gamma complex associated protein 4, [RH, Score=379, Expect=3e-122]} {Mouse: ENSMUSG00000027263, Tubgcp4, tubulin, gamma complex associated protein 4, [RH, Score=376, Expect=2e-121]} {Dmel: FBgn0026431, Grip75, [RH, Score=211, Expect=2e-59]} {Smed: dd_Smed_v6_11306_0_1, dd_Smed_v6_11306_0_1, [RH, Score=335, Expect=5e-106]} {RNA1509_20258} {RNA1310_6475, RNA1509_20258} {RNA1509_20258, RNA815_4392}
11. MligTC455_15782 201 4.19 Mlig455_006365

Neo: -

Age: -

0.954 0.954 - - - - - Mlig455_006365 {REF} {Length: 906} {NoTransDecoderORF} {RNA1310_47212.1} {RNA815_23096}
12. MligTC455_35996 500 10.41 Mlig455_034313, Mlig455_040123

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.322

AK5 0.952 - - - - - 0.952

Mlig455_034313 {REF} {Length: 3979} {TRANSSPLICED} {Human: ENSG00000154027, AK5, adenylate kinase 5, [Score=50.4, Expect=2e-06]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [Score=49.7, Expect=2e-06]} {RNA1509_17110, RNA1509_39960, RNA1509_45641} {RNA1310_19485, RNA1509_39960, RNA1509_45641} {RNA1509_39960, RNA1509_45641, RNA815_14117}

Mlig455_040123 {REF} {Length: 2223} {TRANSSPLICED} {RNA1509_17110} {RNA1310_19485} {RNA815_14117}
13. MligTC455_30611 129 2.68 Mlig455_031173

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.392

Region-enriched R8: 4.530/0.01124

ITPR1 0.951 0.951 - - - - - Mlig455_031173 {REF} {Length: 9349} {Pfam: RIH domain [PF01365.23, score=93.2]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=76.6]; RyR and IP3R Homology associated [PF08454.13, score=72.8]; MIR domain [PF02815.21, score=44.1]; Ion transport protein [PF00520.33, score=31.9]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=239, Expect=4e-62]; ENSG00000123104, ITPR2, inositol 1,4,5-trisphosphate receptor type 2, [Score=229, Expect=2e-59]} {Mouse: ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=241, Expect=7e-63]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=202, Expect=3e-51]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=174, Expect=7e-43]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [Score=1868, Expect=0.0]} {RNA1509_5518} {RNA1310_129.1} {RNA815_62.1}
14. MligTC455_28595 113 2.35 Mlig455_025485, Mlig455_057449

Neo: -

Age: -

0.95 - - - - - 0.950

Mlig455_025485 {REF} {Length: 1322} {NoTransDecoderORF} {RNA1509_20409} {RNA1310_17062} {RNA815_22796.1}

Mlig455_057449 {REF} {Length: 831} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17062} {RNA815_22796.1}
15. MligTC455_47348 2699 56.22 Mlig455_014227

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.429

Region-specific R8: 6.506

Region-enriched R8: 5.811/0.00000
Region-enriched R7: 3.945/0.00000

0.95 0.950 - - - - - Mlig455_014227 {REF} {Length: 1491} {RNA1509_14722, RNA1509_30918} {RNA1310_65420, RNA1509_14722, RNA1509_30918} {RNA1509_14722, RNA1509_30918, RNA815_35136}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA