Data search


search
Exact
Search

Results for MligTC455_28595

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28595 113 2.35 Mlig455_025485, Mlig455_057449

Neo: -

Age: -

Mlig455_025485 {REF} {Length: 1322} {NoTransDecoderORF} {RNA1509_20409} {RNA1310_17062} {RNA815_22796.1}

Mlig455_057449 {REF} {Length: 831} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17062} {RNA815_22796.1}

Cumulative graph for MligTC455_28595

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.512 1.853 1.00000 1.00000
RegionR2 1.41 1.853 0.32696 0.71911
RegionR3 -0.056 1.853 0.87743 1.00000
RegionR4 2.554 1.853 0.04940 0.19108
RegionR5 1.173 1.853 0.46223 0.82454
RegionR6 -0.671 1.853 0.94128 1.00000
RegionR7 1.147 1.853 0.50589 1.00000
RegionR8 -2.045 1.853 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.664 1.853 0.67977 1.00000
RegenerationR2 1.285 1.853 0.08546 0.46997
RegenerationR3 1.987 1.853 0.12190 0.54139
RegenerationR4 0.703 1.853 0.45595 0.84463
RegenerationR5 2.142 1.853 0.03107 0.29409
RegenerationR6 3.499 1.853 0.01164 0.13263
RegenerationBL 3.127 1.853 0.05025 0.25811
RegenerationTP 3.632 1.853 0.06865 0.42140


Genes with expression patterns similar to MligTC455_28595

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28595 113 2.35 Mlig455_025485, Mlig455_057449

Neo: -

Age: -

4 - - 1.000 1.000 1.000 1.000

Mlig455_025485 {REF} {Length: 1322} {NoTransDecoderORF} {RNA1509_20409} {RNA1310_17062} {RNA815_22796.1}

Mlig455_057449 {REF} {Length: 831} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17062} {RNA815_22796.1}
2. MligTC455_17960 44 0.92 Mlig455_021047

Neo: -

Age: -

Region-enriched R2: 4.515/0.04131
Region-enriched R4: 3.266/0.03072

1.725 - - - - 0.773 0.952 Mlig455_021047 {REF} {Length: 2114} {Pfam: SH3 domain [PF17902.3, score=25.9]; Plectin repeat [PF00681.22, score=23.8]} {Smed: dd_Smed_v6_16329_0_1, dd_Smed_v6_16329_0_1, [Score=56.6, Expect=2e-08]} {RNA1509_53557} {RNA1310_11354} {RNA815_18566}
3. MligTC455_34868 1265 26.36 Mlig455_005678

Neo: -

Age: Down-Up-Up

CALM2 0.98 - - - - 0.980 - Mlig455_005678 {REF} {Length: 1313} {Pfam: EF hand [PF00036.34, score=124.8]; EF-hand domain pair [PF13499.8, score=117.9]; EF hand [PF13202.8, score=101.9]; EF-hand domain [PF13405.8, score=99.9]; EF-hand domain pair [PF13833.8, score=77.4]; Dockerin type I domain [PF00404.20, score=45.3]; EF-hand domain [PF14658.8, score=41.8]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=41.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=30.8]; EF-hand domain [PF08976.13, score=24.8]; Family of unknown function (DUF5580) [PF17743.3, score=19.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=140, Expect=7e-43]; ENSG00000160014, CALM3, calmodulin 3, [Score=140, Expect=7e-43]; ENSG00000198668, CALM1, calmodulin 1, [Score=140, Expect=7e-43]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=140, Expect=5e-43]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=140, Expect=5e-43]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=140, Expect=5e-43]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=134, Expect=7e-41]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=137, Expect=6e-42]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=138, Expect=1e-42]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=138, Expect=1e-42]} {RNA1509_12165, RNA1509_40867} {RNA1310_49287, RNA1509_12165, RNA1509_40867} {RNA1509_12165, RNA1509_40867, RNA815_17221.2}
4. MligTC455_28121 122 2.54 Mlig455_003280

Neo: -

Age: -

0.979 - - - - 0.979 - Mlig455_003280 {REF} {Length: 2786} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
5. MligTC455_16660 27 0.55 Mlig455_056328

Neo: -

Age: -

CENPA 0.975 - - - - - 0.975 Mlig455_056328 {REF} {Length: 2270} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=81.8]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.1]} {Human: ENSG00000115163, CENPA, centromere protein A, [Score=80.5, Expect=3e-18]} {Mouse: ENSMUSG00000029177, Cenpa, centromere protein A, [Score=70.9, Expect=8e-15]} {Dmel: FBgn0040477, cid, centromere identifier, [RH, Score=73.2, Expect=4e-15]} {Celegans: WBGene00001946, his-72, Histone H3.3 type 2, [Score=64.3, Expect=1e-12]} {Smed: dd_Smed_v6_8630_0_1, dd_Smed_v6_8630_0_1, [Score=63.5, Expect=1e-12]} {RNA1509_27366} {RNA1310_29469, RNA1509_27366} {RNA1509_27366, RNA815_14172}
6. MligTC455_57023 35 0.72 Mlig455_025177

Neo: -

Age: -

0.975 - - - - - 0.975 Mlig455_025177 {REF} {Length: 323} {NoTransDecoderORF} {RNA1509_16128} {RNA1310_99479.1} {RNA815_29511.2}
7. MligTC455_35996 500 10.41 Mlig455_034313, Mlig455_040123

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.322

AK5 0.974 - - - - - 0.974

Mlig455_034313 {REF} {Length: 3979} {TRANSSPLICED} {Human: ENSG00000154027, AK5, adenylate kinase 5, [Score=50.4, Expect=2e-06]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [Score=49.7, Expect=2e-06]} {RNA1509_17110, RNA1509_39960, RNA1509_45641} {RNA1310_19485, RNA1509_39960, RNA1509_45641} {RNA1509_39960, RNA1509_45641, RNA815_14117}

Mlig455_040123 {REF} {Length: 2223} {TRANSSPLICED} {RNA1509_17110} {RNA1310_19485} {RNA815_14117}
8. MligTC455_45564 117 2.43 Mlig455_006872

Neo: -

Age: logFC(26M/2M)=-2.025

Region-enriched R6: 3.967/0.00318

ARF3 0.973 - - - - - 0.973 Mlig455_006872 {REF} {Length: 1935} {Pfam: ADP-ribosylation factor family [PF00025.23, score=210.6]; Ras family [PF00071.24, score=57.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=32.9]; G-protein alpha subunit [PF00503.22, score=32.2]; 50S ribosome-binding GTPase [PF01926.25, score=21.2]} {Human: ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=214, Expect=3e-71]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=213, Expect=1e-70]; ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=204, Expect=5e-67]} {Mouse: ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=214, Expect=2e-71]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=213, Expect=7e-71]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=213, Expect=5e-71]; ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=204, Expect=3e-67]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=216, Expect=2e-72]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=213, Expect=4e-71]} {Smed: dd_Smed_v6_3383_0_1, dd_Smed_v6_3383_0_1, [RH, Score=227, Expect=1e-76]} {RNA1509_57358} {RNA1310_37939, RNA1509_57358} {RNA1509_57358, RNA815_20725}
9. MligTC455_09828 80 1.67 Mlig455_052764

Neo: -

Age: -

0.97 - - - - - 0.970 Mlig455_052764 {REF} {Length: 1206} {NoTransDecoderORF} {RNA1310_17510.1} {RNA815_9674}
10. MligTC455_23726 76 1.58 Mlig455_032546

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.446

0.97 - - - - 0.970 - Mlig455_032546 {REF} {Length: 2627} {Smed: dd_Smed_v6_7428_0_2, dd_Smed_v6_7428_0_2, [Score=52.4, Expect=8e-07]} {RNA1509_20941} {RNA1310_6850.1} {RNA815_4263.1}
11. MligTC455_36661 127 2.66 Mlig455_013611

Neo: -

Age: -

TUBGCP4 0.962 - - - - - 0.962 Mlig455_013611 {REF} {Length: 3343} {TRANSSPLICED} {Pfam: Gamma tubulin complex component N-terminal [PF17681.3, score=180.8]; Gamma tubulin complex component C-terminal [PF04130.15, score=175.2]} {Human: ENSG00000137822, TUBGCP4, tubulin gamma complex associated protein 4, [RH, Score=379, Expect=3e-122]} {Mouse: ENSMUSG00000027263, Tubgcp4, tubulin, gamma complex associated protein 4, [RH, Score=376, Expect=3e-121]} {Dmel: FBgn0026431, Grip75, [RH, Score=211, Expect=2e-59]} {Smed: dd_Smed_v6_11306_0_1, dd_Smed_v6_11306_0_1, [RH, Score=335, Expect=6e-106]} {RNA1509_20258, RNA1509_45019} {RNA1310_6475, RNA1509_45019} {RNA1509_45019, RNA815_4392}
12. MligTC455_36660 82 1.72 Mlig455_013558

Neo: -

Age: -

TUBGCP4 0.961 - - - - - 0.961 Mlig455_013558 {REF} {Length: 2841} {TRANSSPLICED} {Pfam: Gamma tubulin complex component N-terminal [PF17681.3, score=180.8]; Gamma tubulin complex component C-terminal [PF04130.15, score=173.9]} {Human: ENSG00000137822, TUBGCP4, tubulin gamma complex associated protein 4, [RH, Score=379, Expect=3e-122]} {Mouse: ENSMUSG00000027263, Tubgcp4, tubulin, gamma complex associated protein 4, [RH, Score=376, Expect=2e-121]} {Dmel: FBgn0026431, Grip75, [RH, Score=211, Expect=2e-59]} {Smed: dd_Smed_v6_11306_0_1, dd_Smed_v6_11306_0_1, [RH, Score=335, Expect=5e-106]} {RNA1509_20258} {RNA1310_6475, RNA1509_20258} {RNA1509_20258, RNA815_4392}
13. MligTC455_29066 215 4.47 Mlig455_043845

Neo: -

Age: -

0.958 - - - - 0.958 - Mlig455_043845 {REF} {Length: 3707} {TRANSSPLICED} {RNA1509_13168} {RNA1310_4523} {RNA815_5087}
14. MligTC455_21435 37 0.77 Mlig455_016499

Neo: -

Age: -

RTL1 0.957 - - - - - 0.957 Mlig455_016499 {REF} {Length: 4412} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=88.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=109, Expect=7e-24]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=278, Expect=5e-84]} {RNA1509_56816} {RNA1310_8523, RNA1509_56816}
15. MligTC455_11554 55 1.14 Mlig455_031584

Neo: -

Age: Up-Down-Down

ZNFX1 0.956 - - - - - 0.956 Mlig455_031584 {REF} {Length: 7786} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=115.5]; AAA domain [PF13087.8, score=111.0]; AAA domain [PF13086.8, score=78.9]; AAA domain [PF13245.8, score=31.6]; AAA domain [PF13604.8, score=23.8]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=299, Expect=6e-81]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=297, Expect=2e-80]} {Dmel: FBgn0039165, CG6204, [Score=149, Expect=1e-35]} {Celegans: WBGene00014208, ZK1067.2, [Score=251, Expect=2e-66]} {Smed: dd_Smed_v6_10024_0_1, dd_Smed_v6_10024_0_1, [Score=352, Expect=2e-99]} {RNA1509_11861} {RNA1310_418} {RNA815_9954}
16. MligTC455_13344 65 1.36 Mlig455_002384, Mlig455_044550

Neo: -

Age: -

0.955 - - - - 0.955 -

Mlig455_002384 {REF} {Length: 987} {NoTransDecoderORF} {RNA1310_103623}

Mlig455_044550 {REF} {Length: 797} {NoTransDecoderORF} {RNA1310_110368}
17. MligTC455_19216 82 1.71 Mlig455_038007

Neo: Int S/G2/M

Age: -

0.955 - - - - - 0.955 Mlig455_038007 {REF} {Length: 2594} {TRANSSPLICED} {RNA1509_48249} {RNA1310_31830} {RNA815_49860}
18. MligTC455_32839 282 5.88 Mlig455_048680

Neo: -

Age: logFC(26M/2M)=-0.401

IFT52 0.954 - - - - - 0.954 Mlig455_048680 {REF} {Length: 2593} {TRANSSPLICED} {Pfam: ABC-type uncharacterized transport system [PF09822.11, score=30.3]} {Human: ENSG00000101052, IFT52, intraflagellar transport 52, [RH, Score=518, Expect=0.0]} {Mouse: ENSMUSG00000017858, Ift52, intraflagellar transport 52, [RH, Score=532, Expect=0.0]} {Dmel: FBgn0031829, IFT52, Intraflagellar transport 52, [RH, Score=282, Expect=1e-90]} {Celegans: WBGene00003886, osm-6, Osm-6 protein, [RH, Score=305, Expect=6e-99]} {Smed: dd_Smed_v6_5043_0_1, dd_Smed_v6_5043_0_1, [RH, Score=537, Expect=0.0]} {RNA1509_8537} {RNA1310_16849} {RNA815_7203}
19. MligTC455_31906 195 4.06 Mlig455_068976

Neo: -

Age: Up-Up-Down

0.952 - - - - 0.952 - Mlig455_068976 {REF} {Length: 6455} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=26.5]} {RNA1509_31473} {RNA1310_5450.1} {RNA815_16253.2}
20. MligTC455_35882 47 0.99 Mlig455_058278

Neo: -

Age: -

Region-enriched R4: 3.066/0.02470

0.952 - - - - 0.952 - Mlig455_058278 {REF} {Length: 133} {NoTransDecoderORF} {RNA1509_52793} {RNA1310_10196} {RNA815_54846}
21. MligTC455_37585 138 2.88 Mlig455_050977

Neo: -

Age: logFC(26M/2M)=-0.353

MFSD10 0.952 - - - - - 0.952 Mlig455_050977 {REF} {Length: 3495} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=113.8]; MFS_1 like family [PF12832.9, score=36.9]; Sugar (and other) transporter [PF00083.26, score=30.5]} {Human: ENSG00000109736, MFSD10, major facilitator superfamily domain containing 10, [Score=55.1, Expect=1e-07]} {Mouse: ENSMUSG00000001082, Mfsd10, major facilitator superfamily domain containing 10, [Score=57.0, Expect=2e-08]} {Celegans: WBGene00017339, F10D7.2, [Score=59.3, Expect=4e-09]} {RNA1509_36151} {RNA1310_15615} {RNA815_31475}
22. MligTC455_22536 129 2.7 Mlig455_016888

Neo: -

Age: -

0.95 - - - - - 0.950 Mlig455_016888 {REF} {Length: 1079} {RNA1509_50526} {RNA1310_65793.1} {RNA815_39534}
23. MligTC455_33271 455 9.47 Mlig455_062589

Neo: -

Age: -

SLC35A2 0.95 - - - - - 0.950 Mlig455_062589 {REF} {Length: 5859} {TRANSSPLICED} {Pfam: Nucleotide-sugar transporter [PF04142.17, score=381.6]; EamA-like transporter family [PF00892.22, score=29.7]; UAA transporter family [PF08449.13, score=27.9]} {Human: ENSG00000102100, SLC35A2, solute carrier family 35 member A2, [RH, Score=287, Expect=2e-93]; ENSG00000164414, SLC35A1, solute carrier family 35 member A1, [RH, Score=284, Expect=2e-93]} {Mouse: ENSMUSG00000031156, Slc35a2, solute carrier family 35 (UDP-galactose transporter), member A2, [RH, Score=284, Expect=6e-93]; ENSMUSG00000028293, Slc35a1, solute carrier family 35 (CMP-sialic acid transporter), member 1, [RH, Score=277, Expect=4e-91]} {Dmel: FBgn0024994, Csat, [RH, Score=303, Expect=4e-101]} {Celegans: WBGene00005153, srf-3, UDP-galactose/UDP-N-acetylglucosamine transporter srf-3, [RH, Score=241, Expect=9e-77]} {Smed: dd_Smed_v6_4691_0_1, dd_Smed_v6_4691_0_1, [RH, Score=324, Expect=9e-110]} {RNA1509_20257, RNA1509_31911, RNA1509_54503, RNA1509_56118} {RNA1310_27382, RNA1509_31911, RNA1509_54503, RNA1509_56118} {RNA1509_31911, RNA1509_54503, RNA1509_56118, RNA815_5729}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA