TomoSeq data search

Data search

Results for MligTC455_22610

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22610

880

18.34

Mlig455_011465

Neo: -

Age: -

Mlig455_011465 {REF} {Length: 1007} {RNA1509_51107} {RNA1310_40537} {RNA815_21906}

Cumulative graph for MligTC455_22610

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.371	4.259	0.67483	1.00000
RegionR2	-0.402	4.259	0.47859	0.86296
RegionR3	0.219	4.259	0.63938	1.00000
RegionR4	0.377	4.259	0.48663	0.81427
RegionR5	-0.362	4.259	0.44861	0.81046
RegionR6	0.152	4.259	0.75309	1.00000
RegionR7	0.361	4.259	0.48914	1.00000
RegionR8	-0.716	4.259	0.32249	0.95615

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.422	4.259	0.25929	0.96822
RegenerationR2	-0.222	4.259	0.69193	0.95360
RegenerationR3	0.098	4.259	0.86600	1.00000
RegenerationR4	0.196	4.259	0.73922	0.96738
RegenerationR5	0.776	4.259	0.17745	0.60676
RegenerationR6	-0.473	4.259	0.42610	0.75537
RegenerationBL	-0.053	4.259	0.92983	1.00000
RegenerationTP	0.321	4.259	0.61174	0.96755

Genes with expression patterns similar to MligTC455_22610

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22610	880	18.34	Mlig455_011465	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_011465 {REF} {Length: 1007} {RNA1509_51107} {RNA1310_40537} {RNA815_21906}
2.	MligTC455_33227	1822	37.96	Mlig455_015892	Neo: - Age: -	PRR9	0.976	-	-	-	0.976	-	-	Mlig455_015892 {REF} {Length: 4056} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=48.1, Expect=2e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=67.0, Expect=2e-11]} {RNA1509_8721} {RNA1310_34240} {RNA815_7334.1}
3.	MligTC455_47917	1402	29.2	Mlig455_039834	Neo: - Age: -	DNAJB2	0.961	-	-	-	0.961	-	-	Mlig455_039834 {REF} {Length: 4553} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=96.9]} {Human: ENSG00000135924, DNAJB2, DnaJ heat shock protein family (Hsp40) member B2, [Score=122, Expect=3e-32]; ENSG00000179407, DNAJB8, DnaJ heat shock protein family (Hsp40) member B8, [Score=116, Expect=9e-31]} {Mouse: ENSMUSG00000081984, Dnajb3, DnaJ heat shock protein family (Hsp40) member B3, [Score=117, Expect=3e-31]; ENSMUSG00000026203, Dnajb2, DnaJ heat shock protein family (Hsp40) member B2, [Score=116, Expect=5e-30]; ENSMUSG00000029131, Dnajb6, DnaJ heat shock protein family (Hsp40) member B6, [Score=113, Expect=1e-29]; ENSMUSG00000048206, Dnajb8, DnaJ heat shock protein family (Hsp40) member B8, [Score=113, Expect=7e-30]} {Dmel: FBgn0034091, mrj, [Score=146, Expect=2e-42]} {Celegans: WBGene00001031, dnj-13, DNaJ domain (Prokaryotic heat shock protein), [Score=89.7, Expect=2e-20]} {Smed: dd_Smed_v6_2706_0_1, dd_Smed_v6_2706_0_1, [Score=161, Expect=2e-48]} {RNA1509_27790, RNA1509_45253, RNA1509_45510, RNA1509_4710, RNA1509_4874, RNA1509_8474} {RNA1310_28593, RNA1509_27790, RNA1509_45253, RNA1509_45510, RNA1509_4710, RNA1509_4874, RNA1509_8474} {RNA1509_27790, RNA1509_45253, RNA1509_45510, RNA1509_4710, RNA1509_4874, RNA1509_8474, RNA815_3659}
4.	MligTC455_31835	460	9.57	Mlig455_004031, Mlig455_004058, Mlig455_060429	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.681		0.96	-	-	-	0.960	-	-	Mlig455_004031 {REF} {Length: 1282} {TRANSSPLICED} {RNA1509_21492} {RNA1310_1437} {RNA815_11827.1} Mlig455_004058 {REF} {Length: 1278} {TRANSSPLICED} {RNA1509_21492} {RNA1310_1437, RNA1509_21492} {RNA1509_21492, RNA815_11827.1} Mlig455_060429 {REF} {Length: 1281} {TRANSSPLICED} {RNA1509_21492} {RNA1310_1437} {RNA815_11827.1}
5.	MligTC455_42463	367	7.65	Mlig455_069188	Neo: - Age: - Region-enriched R7: 1.879/0.00540 Region-enriched R2: 1.715/0.02219	GNB4	0.956	-	-	0.956	-	-	-	Mlig455_069188 {REF} {Length: 2146} {Pfam: WD domain, G-beta repeat [PF00400.34, score=116.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.0]} {Human: ENSG00000114450, GNB4, G protein subunit beta 4, [Score=348, Expect=2e-118]; ENSG00000172354, GNB2, G protein subunit beta 2, [Score=345, Expect=4e-117]; ENSG00000078369, GNB1, G protein subunit beta 1, [Score=344, Expect=9e-117]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=336, Expect=1e-113]} {Mouse: ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=346, Expect=6e-117]; ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=344, Expect=6e-117]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=337, Expect=3e-114]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=332, Expect=5e-112]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=356, Expect=1e-121]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=355, Expect=2e-121]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=375, Expect=4e-129]} {RNA1509_5337} {RNA1310_9924.1} {RNA815_3556}
6.	MligTC455_19086	638	13.3	Mlig455_002011	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.325	MEGF6	0.955	-	-	0.955	-	-	-	Mlig455_002011 {REF} {Length: 3865} {Pfam: Laminin EGF domain [PF00053.26, score=178.1]; EGF-like domain [PF07974.15, score=36.9]; Human growth factor-like EGF [PF12661.9, score=29.0]} {Human: ENSG00000162591, MEGF6, multiple EGF like domains 6, [Score=518, Expect=2e-165]} {Mouse: ENSMUSG00000057751, Megf6, multiple EGF-like-domains 6, [Score=518, Expect=5e-165]} {Dmel: FBgn0027594, drpr, draper, [RH, Score=431, Expect=1e-137]} {Celegans: WBGene00013416, Y64G10A.7, [Score=542, Expect=2e-174]} {Smed: dd_Smed_v6_5630_0_1, dd_Smed_v6_5630_0_1, [Score=397, Expect=3e-122]} {RNA1509_42688} {RNA1310_3903.1} {RNA815_8704}
7.	MligTC455_37400	619	12.9	Mlig455_067819	Neo: Int S/G2/M Age: -	TREX1	0.952	-	-	-	0.952	-	-	Mlig455_067819 {REF} {Length: 1346} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=26.6]} {Human: ENSG00000213689, TREX1, three prime repair exonuclease 1, [RH, Score=103, Expect=9e-26]} {Mouse: ENSMUSG00000031372, Trex2, three prime repair exonuclease 2, [Score=94.7, Expect=5e-23]; ENSMUSG00000049734, Trex1, three prime repair exonuclease 1, [Score=93.6, Expect=5e-22]} {Dmel: FBgn0031484, CG3165, [Score=70.1, Expect=1e-13]} {RNA1509_14203, RNA1509_32322, RNA1509_45939} {RNA1310_41251, RNA1509_14203, RNA1509_45939} {RNA1509_14203, RNA1509_45939, RNA815_48691}
8.	MligTC455_47651	2087	43.48	Mlig455_013872, Mlig455_057738	Neo: Int S/G2/M Age: - Region-enriched R4: 1.433/0.00043	NUP98	0.952	-	-	-	0.952	-	-	Mlig455_013872 {REF} {Length: 3541} {Human: ENSG00000110713, NUP98, nucleoporin 98, [RH, Score=106, Expect=1e-22]} {Mouse: ENSMUSG00000063550, Nup98, nucleoporin 98, [RH, Score=103, Expect=4e-22]} {Dmel: FBgn0039120, Nup98-96, Nucleoporin 98-96kD, [Score=102, Expect=1e-21]} {Celegans: WBGene00003796, npp-10, Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96, [RH, Score=118, Expect=6e-27]} {Smed: dd_Smed_v6_5347_0_1, dd_Smed_v6_5347_0_1, [Score=71.6, Expect=2e-12]} {RNA1509_14875} {RNA1310_4705} {RNA815_4964} Mlig455_057738 {REF} {Length: 5155} {Human: ENSG00000110713, NUP98, nucleoporin 98, [RH, Score=106, Expect=1e-22]} {Mouse: ENSMUSG00000063550, Nup98, nucleoporin 98, [RH, Score=103, Expect=3e-22]} {Dmel: FBgn0039120, Nup98-96, Nucleoporin 98-96kD, [Score=102, Expect=1e-21]} {Celegans: WBGene00003796, npp-10, Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96, [RH, Score=118, Expect=5e-27]} {Smed: dd_Smed_v6_5347_0_1, dd_Smed_v6_5347_0_1, [Score=70.9, Expect=2e-12]} {RNA1509_14875} {RNA1310_4705, RNA1509_14875} {RNA1509_14875, RNA815_4964}
9.	MligTC455_41936	1214	25.28	Mlig455_010436	Neo: - Age: - Region-enriched R8: 1.436/0.01364 Region-enriched R7: 1.262/0.00860		0.95	-	-	0.950	-	-	-	Mlig455_010436 {REF} {Length: 5050} {RNA1509_10788, RNA1509_21129, RNA1509_21353} {RNA1310_19529.1, RNA1509_10788, RNA1509_21129, RNA1509_21353} {RNA1509_10788, RNA1509_21129, RNA1509_21353, RNA815_12211.1}

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