Data search
Results for MligTC455_37400
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_37400 | 619 | 12.90 | Mlig455_067819 | Neo: Int S/G2/M Age: - |
TREX1 | Mlig455_067819 {REF} {Length: 1346} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=26.6]} {Human: ENSG00000213689, TREX1, three prime repair exonuclease 1, [RH, Score=103, Expect=9e-26]} {Mouse: ENSMUSG00000031372, Trex2, three prime repair exonuclease 2, [Score=94.7, Expect=5e-23]; ENSMUSG00000049734, Trex1, three prime repair exonuclease 1, [Score=93.6, Expect=5e-22]} {Dmel: FBgn0031484, CG3165, [Score=70.1, Expect=1e-13]} {RNA1509_14203, RNA1509_32322, RNA1509_45939} {RNA1310_41251, RNA1509_14203, RNA1509_45939} {RNA1509_14203, RNA1509_45939, RNA815_48691} |
Cumulative graph for MligTC455_37400
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.428 | 3.954 | 0.19749 | 0.83328 | |
| RegionR2 | 1.106 | 3.954 | 0.02125 | 0.15947 | |
| RegionR3 | 0.365 | 3.954 | 0.29600 | 0.83763 | |
| RegionR4 | -0.274 | 3.954 | 0.52340 | 0.84786 | |
| RegionR5 | 0.442 | 3.954 | 0.15202 | 0.40675 | |
| RegionR6 | 0.202 | 3.954 | 0.58686 | 1.00000 | |
| RegionR7 | -0.236 | 3.954 | 0.65511 | 1.00000 | |
| RegionR8 | -0.178 | 3.954 | 0.78660 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.486 | 3.954 | 0.44724 | 1.00000 | |
| RegenerationR2 | -0.02 | 3.954 | 0.95779 | 1.00000 | |
| RegenerationR3 | 0.862 | 3.954 | 0.03865 | 0.34609 | |
| RegenerationR4 | 0.758 | 3.954 | 0.07028 | 0.42146 | |
| RegenerationR5 | 0.962 | 3.954 | 0.00611 | 0.14262 | |
| RegenerationR6 | 0.983 | 3.954 | 0.02367 | 0.19120 | |
| RegenerationBL | 0.564 | 3.954 | 0.38092 | 0.74949 | |
| RegenerationTP | 1.012 | 3.954 | 0.09166 | 0.47603 |
Genes with expression patterns similar to MligTC455_37400
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_37400 | 619 | 12.9 | Mlig455_067819 | Neo: Int S/G2/M Age: - |
TREX1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_067819 {REF} {Length: 1346} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=26.6]} {Human: ENSG00000213689, TREX1, three prime repair exonuclease 1, [RH, Score=103, Expect=9e-26]} {Mouse: ENSMUSG00000031372, Trex2, three prime repair exonuclease 2, [Score=94.7, Expect=5e-23]; ENSMUSG00000049734, Trex1, three prime repair exonuclease 1, [Score=93.6, Expect=5e-22]} {Dmel: FBgn0031484, CG3165, [Score=70.1, Expect=1e-13]} {RNA1509_14203, RNA1509_32322, RNA1509_45939} {RNA1310_41251, RNA1509_14203, RNA1509_45939} {RNA1509_14203, RNA1509_45939, RNA815_48691} |
| 2. | MligTC455_13659 | 277 | 5.77 | Mlig455_060046, Mlig455_063498 | Neo: Irradiation Age: Up-Up-Up, logFC(26M/2M)=0.925 Region-enriched R5: 4.130/0.00000 |
1.753 | - | - | - | 0.794 | - | 0.959 | Mlig455_060046 {REF} {Length: 4212} {RNA1509_57337} {RNA1310_9265, RNA1509_57337} {RNA1509_57337, RNA815_13115} Mlig455_063498 {REF} {Length: 1365} {NoTransDecoderORF} {RNA1509_57337} {RNA1310_54209} {RNA815_29261} |
|
| 3. | MligTC455_44466 | 754 | 15.72 | Mlig455_016317 | Neo: - Age: Down-Down-Up Region-enriched R5: 1.957/0.00000 |
HMCN1 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_016317 {REF} {Length: 3731} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=135.0]; Spondin-like TSP1 domain [PF19028.2, score=100.0]; CCN3 Nov like TSP1 domain [PF19035.2, score=39.9]; Thrombospondin type 1 domain [PF19030.2, score=32.2]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=161, Expect=4e-41]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=132, Expect=2e-31]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=70.1, Expect=4e-12]} {Celegans: WBGene00011880, T21B6.3, [Score=120, Expect=3e-28]} {Smed: dd_Smed_v6_2783_0_1, dd_Smed_v6_2783_0_1, [RH, Score=145, Expect=5e-38]} {RNA1509_46355} {RNA1310_4790} {RNA815_4915} |
| 4. | MligTC455_41972 | 491 | 10.23 | Mlig455_002791 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.271 Region-enriched R5: 2.118/0.00000 |
0.958 | - | - | - | - | - | 0.958 | Mlig455_002791 {REF} {Length: 3425} {TRANSSPLICED} {Pfam: Pyrimidine/purine nucleoside phosphorylase [PF06865.13, score=74.4]; Insecticidal Crystal Toxin, P42 [PF05431.13, score=34.8]; Copper resistance protein B precursor (CopB) [PF05275.13, score=30.7]; Autotransporter beta-domain [PF03797.21, score=27.2]; Protein of unknown function (DUF1062) [PF06353.14, score=21.9]; ML domain [PF02221.17, score=19.8]} {Celegans: WBGene00006436, ttn-1, Titin homolog, [RH, Score=149, Expect=2e-36]} {RNA1509_15974} {RNA1310_28018} {RNA815_1710.1} | |
| 5. | MligTC455_52034 | 262 | 5.47 | Mlig455_036049 | Neo: - |
FAM161A | 0.958 | - | - | 0.958 | - | - | - | Mlig455_036049 {REF} {Length: 4013} {Pfam: Uncharacterised protein family UPF0564 [PF10595.11, score=139.9]; Family of unknown function (DUF5641) [PF18701.3, score=27.0]} {Human: ENSG00000170264, FAM161A, FAM161A, centrosomal protein, [RH, Score=79.3, Expect=1e-14]} {Mouse: ENSMUSG00000021234, Fam161b, family with sequence similarity 161, member B, [Score=66.6, Expect=6e-11]; ENSMUSG00000049811, Fam161a, family with sequence similarity 161, member A, [Score=65.5, Expect=1e-10]} {Smed: dd_Smed_v6_15201_0_1, dd_Smed_v6_15201_0_1, [RH, Score=186, Expect=5e-50]} {RNA1509_10896} {RNA1310_9692.1} {RNA815_784} |
| 6. | MligTC455_44799 | 1254 | 26.12 | Mlig455_063760 | Neo: - Age: - |
MEST | 0.957 | - | - | - | - | 0.957 | - | Mlig455_063760 {REF} {Length: 1770} {TRANSSPLICED} {Pfam: Alpha/beta hydrolase family [PF12697.9, score=48.4]; alpha/beta hydrolase fold [PF00561.22, score=44.8]; Serine aminopeptidase, S33 [PF12146.10, score=32.6]} {Human: ENSG00000106484, MEST, mesoderm specific transcript, [RH, Score=113, Expect=4e-28]} {Mouse: ENSMUSG00000051855, Mest, mesoderm specific transcript, [RH, Score=114, Expect=2e-28]} {RNA1509_17233, RNA1509_29667, RNA1509_51421, RNA1509_59650, RNA1509_9916} {RNA1310_16921, RNA1509_17233, RNA1509_29667, RNA1509_51421, RNA1509_59650, RNA1509_9916} {RNA1509_17233, RNA1509_29667, RNA1509_51421, RNA1509_59650, RNA1509_9916, RNA815_7250.1} |
| 7. | MligTC455_49425 | 1383 | 28.82 | Mlig455_046733, Mlig455_046739 | Neo: Irradiation Age: - Region-specific R5: 2.321 Region-enriched R5: 2.007/0.00000 |
CNOT9 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_046733 {REF} {Length: 1943} {TRANSSPLICED} {Pfam: Cell differentiation family, Rcd1-like [PF04078.15, score=396.4]} {Human: ENSG00000144580, CNOT9, CCR4-NOT transcription complex subunit 9, [RH, Score=401, Expect=2e-141]} {Mouse: ENSMUSG00000026174, Cnot9, CCR4-NOT transcription complex, subunit 9, [RH, Score=401, Expect=1e-141]} {Dmel: FBgn0031047, Rcd-1, Required for cell differentiation 1, [Score=372, Expect=4e-130]} {Celegans: WBGene00016139, ntl-9, NOT-Like (Yeast CCR4/NOT complex component), [RH, Score=344, Expect=9e-119]} {Smed: dd_Smed_v6_2344_0_1, dd_Smed_v6_2344_0_1, [RH, Score=411, Expect=3e-145]} {RNA1509_5386} {RNA1310_13428.2} {RNA815_5416.1} Mlig455_046739 {REF} {Length: 2223} {TRANSSPLICED} {Pfam: Cell differentiation family, Rcd1-like [PF04078.15, score=396.4]} {Human: ENSG00000144580, CNOT9, CCR4-NOT transcription complex subunit 9, [RH, Score=401, Expect=2e-141]} {Mouse: ENSMUSG00000026174, Cnot9, CCR4-NOT transcription complex, subunit 9, [RH, Score=401, Expect=1e-141]} {Dmel: FBgn0031047, Rcd-1, Required for cell differentiation 1, [Score=372, Expect=4e-130]} {Celegans: WBGene00016139, ntl-9, NOT-Like (Yeast CCR4/NOT complex component), [RH, Score=344, Expect=9e-119]} {Smed: dd_Smed_v6_2344_0_1, dd_Smed_v6_2344_0_1, [RH, Score=411, Expect=3e-145]} {RNA1509_35026, RNA1509_38672, RNA1509_5386} {RNA1310_13428.2, RNA1509_35026, RNA1509_38672, RNA1509_5386} {RNA1509_35026, RNA1509_38672, RNA1509_5386, RNA815_5416.1} |
| 8. | MligTC455_22610 | 880 | 18.34 | Mlig455_011465 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_011465 {REF} {Length: 1007} {RNA1509_51107} {RNA1310_40537} {RNA815_21906} | |
| 9. | MligTC455_42319 | 160 | 3.34 | Mlig455_019600 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.599 |
ZNHIT3 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_019600 {REF} {Length: 1499} {TRANSSPLICED} {tRNA: Undet(NNN),pseudo, score=29.1} {Pfam: HIT zinc finger [PF04438.18, score=21.2]} {Human: ENSG00000273611, ZNHIT3, zinc finger HIT-type containing 3, [RH, Score=75.5, Expect=4e-17]; ENSG00000278574, ZNHIT3, zinc finger HIT-type containing 3, [RH, Score=75.5, Expect=4e-17]} {Mouse: ENSMUSG00000020526, Znhit3, zinc finger, HIT type 3, [RH, Score=72.8, Expect=3e-16]} {Dmel: FBgn0034033, CG8204, [RH, Score=77.4, Expect=3e-18]} {RNA1509_12423} {RNA1310_40751} {RNA815_21136} |
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