TomoSeq data search

Data search

Results for MligTC455_22619

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_22619	1671	34.82	Mlig455_007289, Mlig455_007302	Neo: - Age: -	SUCLA2	Mlig455_007289 {REF} {Length: 2836} {Pfam: ATP-grasp domain [PF08442.12, score=221.5]; CoA-ligase [PF00549.21, score=96.1]; ATP-grasp domain [PF13549.8, score=22.1]} {Human: ENSG00000136143, SUCLA2, succinate-CoA ligase ADP-forming beta subunit, [RH, Score=582, Expect=0.0]} {Mouse: ENSMUSG00000022110, Sucla2, succinate-Coenzyme A ligase, ADP-forming, beta subunit, [RH, Score=580, Expect=0.0]} {Dmel: FBgn0037643, skap, skpA associated protein, [RH, Score=491, Expect=2e-171]} {Celegans: WBGene00009812, suca-1, Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, [RH, Score=518, Expect=0.0]} {Smed: dd_Smed_v6_2298_0_1, dd_Smed_v6_2298_0_1, [RH, Score=610, Expect=0.0]} {RNA1509_2992} {RNA1310_11624.1} {RNA815_4199.1} Mlig455_007302 {REF} {Length: 3115} {Pfam: ATP-grasp domain [PF08442.12, score=221.5]; CoA-ligase [PF00549.21, score=96.1]; ATP-grasp domain [PF13549.8, score=22.1]} {Human: ENSG00000136143, SUCLA2, succinate-CoA ligase ADP-forming beta subunit, [RH, Score=582, Expect=0.0]} {Mouse: ENSMUSG00000022110, Sucla2, succinate-Coenzyme A ligase, ADP-forming, beta subunit, [RH, Score=580, Expect=0.0]} {Dmel: FBgn0037643, skap, skpA associated protein, [RH, Score=491, Expect=2e-171]} {Celegans: WBGene00009812, suca-1, Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, [RH, Score=518, Expect=0.0]} {Smed: dd_Smed_v6_2298_0_1, dd_Smed_v6_2298_0_1, [RH, Score=610, Expect=0.0]} {RNA1509_15358, RNA1509_2992, RNA1509_45447} {RNA1310_11624.1, RNA1509_15358, RNA1509_2992, RNA1509_45447} {RNA1509_15358, RNA1509_2992, RNA1509_45447, RNA815_4199.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22619

1671

34.82

Mlig455_007289, Mlig455_007302

Neo: -

Age: -

SUCLA2

Mlig455_007289 {REF} {Length: 2836} {Pfam: ATP-grasp domain [PF08442.12, score=221.5]; CoA-ligase [PF00549.21, score=96.1]; ATP-grasp domain [PF13549.8, score=22.1]} {Human: ENSG00000136143, SUCLA2, succinate-CoA ligase ADP-forming beta subunit, [RH, Score=582, Expect=0.0]} {Mouse: ENSMUSG00000022110, Sucla2, succinate-Coenzyme A ligase, ADP-forming, beta subunit, [RH, Score=580, Expect=0.0]} {Dmel: FBgn0037643, skap, skpA associated protein, [RH, Score=491, Expect=2e-171]} {Celegans: WBGene00009812, suca-1, Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, [RH, Score=518, Expect=0.0]} {Smed: dd_Smed_v6_2298_0_1, dd_Smed_v6_2298_0_1, [RH, Score=610, Expect=0.0]} {RNA1509_2992} {RNA1310_11624.1} {RNA815_4199.1}

Mlig455_007302 {REF} {Length: 3115} {Pfam: ATP-grasp domain [PF08442.12, score=221.5]; CoA-ligase [PF00549.21, score=96.1]; ATP-grasp domain [PF13549.8, score=22.1]} {Human: ENSG00000136143, SUCLA2, succinate-CoA ligase ADP-forming beta subunit, [RH, Score=582, Expect=0.0]} {Mouse: ENSMUSG00000022110, Sucla2, succinate-Coenzyme A ligase, ADP-forming, beta subunit, [RH, Score=580, Expect=0.0]} {Dmel: FBgn0037643, skap, skpA associated protein, [RH, Score=491, Expect=2e-171]} {Celegans: WBGene00009812, suca-1, Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, [RH, Score=518, Expect=0.0]} {Smed: dd_Smed_v6_2298_0_1, dd_Smed_v6_2298_0_1, [RH, Score=610, Expect=0.0]} {RNA1509_15358, RNA1509_2992, RNA1509_45447} {RNA1310_11624.1, RNA1509_15358, RNA1509_2992, RNA1509_45447} {RNA1509_15358, RNA1509_2992, RNA1509_45447, RNA815_4199.1}

Cumulative graph for MligTC455_22619

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.391	5.376	0.17100	0.79607
RegionR2	1.38	5.376	0.01268	0.11688
RegionR3	0.662	5.376	0.15134	0.65891
RegionR4	-0.213	5.376	0.67579	0.97106
RegionR5	0.14	5.376	0.74752	1.00000
RegionR6	0.182	5.376	0.69303	1.00000
RegionR7	-0.722	5.376	0.16421	0.74840
RegionR8	-0.037	5.376	0.94935	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.414	5.376	0.14348	0.88288
RegenerationR2	-0.193	5.376	0.71789	0.96260
RegenerationR3	0.679	5.376	0.23348	0.66807
RegenerationR4	0.346	5.376	0.55021	0.89283
RegenerationR5	0.425	5.376	0.43798	0.82303
RegenerationR6	0.127	5.376	0.82516	0.98895
RegenerationBL	0.713	5.376	0.19770	0.53475
RegenerationTP	1.084	5.376	0.06859	0.42128

Genes with expression patterns similar to MligTC455_22619

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22619	1671	34.82	Mlig455_007289, Mlig455_007302	Neo: - Age: -	SUCLA2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007289 {REF} {Length: 2836} {Pfam: ATP-grasp domain [PF08442.12, score=221.5]; CoA-ligase [PF00549.21, score=96.1]; ATP-grasp domain [PF13549.8, score=22.1]} {Human: ENSG00000136143, SUCLA2, succinate-CoA ligase ADP-forming beta subunit, [RH, Score=582, Expect=0.0]} {Mouse: ENSMUSG00000022110, Sucla2, succinate-Coenzyme A ligase, ADP-forming, beta subunit, [RH, Score=580, Expect=0.0]} {Dmel: FBgn0037643, skap, skpA associated protein, [RH, Score=491, Expect=2e-171]} {Celegans: WBGene00009812, suca-1, Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, [RH, Score=518, Expect=0.0]} {Smed: dd_Smed_v6_2298_0_1, dd_Smed_v6_2298_0_1, [RH, Score=610, Expect=0.0]} {RNA1509_2992} {RNA1310_11624.1} {RNA815_4199.1} Mlig455_007302 {REF} {Length: 3115} {Pfam: ATP-grasp domain [PF08442.12, score=221.5]; CoA-ligase [PF00549.21, score=96.1]; ATP-grasp domain [PF13549.8, score=22.1]} {Human: ENSG00000136143, SUCLA2, succinate-CoA ligase ADP-forming beta subunit, [RH, Score=582, Expect=0.0]} {Mouse: ENSMUSG00000022110, Sucla2, succinate-Coenzyme A ligase, ADP-forming, beta subunit, [RH, Score=580, Expect=0.0]} {Dmel: FBgn0037643, skap, skpA associated protein, [RH, Score=491, Expect=2e-171]} {Celegans: WBGene00009812, suca-1, Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, [RH, Score=518, Expect=0.0]} {Smed: dd_Smed_v6_2298_0_1, dd_Smed_v6_2298_0_1, [RH, Score=610, Expect=0.0]} {RNA1509_15358, RNA1509_2992, RNA1509_45447} {RNA1310_11624.1, RNA1509_15358, RNA1509_2992, RNA1509_45447} {RNA1509_15358, RNA1509_2992, RNA1509_45447, RNA815_4199.1}
2.	MligTC455_36165	332	6.92	Mlig455_022583	Neo: - Age: logFC(26M/2M)=0.527	AC129492.3	0.969	-	-	0.969	-	-	-	Mlig455_022583 {REF} {Length: 1737} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=104.2]} {Human: ENSG00000263620, AC129492.3, novel protein, [Score=67.4, Expect=5e-15]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=66.6, Expect=7e-15]} {Mouse: ENSMUSG00000028955, Vamp3, vesicle-associated membrane protein 3, [Score=66.2, Expect=5e-15]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=75.9, Expect=8e-19]} {Smed: dd_Smed_v6_6394_0_1, dd_Smed_v6_6394_0_1, [Score=65.5, Expect=6e-15]} {RNA1509_35284} {RNA1310_48659} {RNA815_32035}
3.	MligTC455_46905	2015	41.97	Mlig455_053779	Neo: - Age: logFC(26M/2M)=0.188	PDPR	0.959	-	-	-	-	-	0.959	Mlig455_053779 {REF} {Length: 3098} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=144.0]; FAD dependent oxidoreductase central domain [PF16350.7, score=29.7]; Aminomethyltransferase folate-binding domain [PF01571.23, score=23.4]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=21.8]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=21.0]; FAD binding domain [PF00890.26, score=19.6]} {Human: ENSG00000090857, PDPR, pyruvate dehydrogenase phosphatase regulatory subunit, [Score=305, Expect=9e-91]} {Mouse: ENSMUSG00000033624, Pdpr, pyruvate dehydrogenase phosphatase regulatory subunit, [Score=279, Expect=2e-81]} {Dmel: FBgn0029706, CG3626, [Score=249, Expect=3e-70]} {Celegans: WBGene00013718, pdpr-1, Pyruvate Dehydrogenase Phosphatase Regulatory subunit, [Score=162, Expect=3e-41]} {Smed: dd_Smed_v6_4280_0_1, dd_Smed_v6_4280_0_1, [Score=206, Expect=1e-55]} {RNA1509_23369, RNA1509_6365} {RNA1310_5958.2, RNA1509_23369} {RNA1509_23369, RNA815_1712}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_22619

1671

34.82

Mlig455_007289, Mlig455_007302

Neo: -

Age: -

SUCLA2

1.000

MligTC455_36165

332

6.92

Mlig455_022583

Neo: -

Age: logFC(26M/2M)=0.527

AC129492.3

0.969

Mlig455_022583 {REF} {Length: 1737} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=104.2]} {Human: ENSG00000263620, AC129492.3, novel protein, [Score=67.4, Expect=5e-15]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=66.6, Expect=7e-15]} {Mouse: ENSMUSG00000028955, Vamp3, vesicle-associated membrane protein 3, [Score=66.2, Expect=5e-15]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=75.9, Expect=8e-19]} {Smed: dd_Smed_v6_6394_0_1, dd_Smed_v6_6394_0_1, [Score=65.5, Expect=6e-15]} {RNA1509_35284} {RNA1310_48659} {RNA815_32035}

MligTC455_46905

2015

41.97

Mlig455_053779

Neo: -

Age: logFC(26M/2M)=0.188

PDPR

0.959

Mlig455_053779 {REF} {Length: 3098} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=144.0]; FAD dependent oxidoreductase central domain [PF16350.7, score=29.7]; Aminomethyltransferase folate-binding domain [PF01571.23, score=23.4]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=21.8]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=21.0]; FAD binding domain [PF00890.26, score=19.6]} {Human: ENSG00000090857, PDPR, pyruvate dehydrogenase phosphatase regulatory subunit, [Score=305, Expect=9e-91]} {Mouse: ENSMUSG00000033624, Pdpr, pyruvate dehydrogenase phosphatase regulatory subunit, [Score=279, Expect=2e-81]} {Dmel: FBgn0029706, CG3626, [Score=249, Expect=3e-70]} {Celegans: WBGene00013718, pdpr-1, Pyruvate Dehydrogenase Phosphatase Regulatory subunit, [Score=162, Expect=3e-41]} {Smed: dd_Smed_v6_4280_0_1, dd_Smed_v6_4280_0_1, [Score=206, Expect=1e-55]} {RNA1509_23369, RNA1509_6365} {RNA1310_5958.2, RNA1509_23369} {RNA1509_23369, RNA815_1712}