M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_36165

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36165 332 6.92 Mlig455_022583

Neo: -

Age: logFC(26M/2M)=0.527

 AC129492.3 Mlig455_022583 {REF} {Length: 1737} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=104.2]} {Human: ENSG00000263620, AC129492.3, novel protein, [Score=67.4, Expect=5e-15]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=66.6, Expect=7e-15]} {Mouse: ENSMUSG00000028955, Vamp3, vesicle-associated membrane protein 3, [Score=66.2, Expect=5e-15]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=75.9, Expect=8e-19]} {Smed: dd_Smed_v6_6394_0_1, dd_Smed_v6_6394_0_1, [Score=65.5, Expect=6e-15]} {RNA1509_35284} {RNA1310_48659} {RNA815_32035}

Cumulative graph for MligTC455_36165

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.047 3.12 0.42361 1.00000
RegionR2 0.079 3.12 0.89484 1.00000
RegionR3 -0.528 3.12 0.30344 0.84504
RegionR4 0.386 3.12 0.56610 0.88497
RegionR5 -0.049 3.12 0.92056 1.00000
RegionR6 -0.176 3.12 0.73997 1.00000
RegionR7 -0.898 3.12 0.23899 0.86352
RegionR8 0.139 3.12 0.86369 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.014 3.12 0.10141 0.81944
RegenerationR2 0.126 3.12 0.79692 0.98866
RegenerationR3 -0.499 3.12 0.40718 0.80708
RegenerationR4 -0.621 3.12 0.32975 0.76420
RegenerationR5 -0.128 3.12 0.81796 0.99404
RegenerationR6 0.043 3.12 0.94641 1.00000
RegenerationBL -0.394 3.12 0.59623 0.94454
RegenerationTP 0.214 3.12 0.78155 1.00000


Genes with expression patterns similar to MligTC455_36165

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36165 332 6.92 Mlig455_022583

Neo: -

Age: logFC(26M/2M)=0.527

 AC129492.3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_022583 {REF} {Length: 1737} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=104.2]} {Human: ENSG00000263620, AC129492.3, novel protein, [Score=67.4, Expect=5e-15]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=66.6, Expect=7e-15]} {Mouse: ENSMUSG00000028955, Vamp3, vesicle-associated membrane protein 3, [Score=66.2, Expect=5e-15]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=75.9, Expect=8e-19]} {Smed: dd_Smed_v6_6394_0_1, dd_Smed_v6_6394_0_1, [Score=65.5, Expect=6e-15]} {RNA1509_35284} {RNA1310_48659} {RNA815_32035}
2. MligTC455_27021 253 5.26 Mlig455_054758

Neo: -

Age: -

 4.216 0.845 0.711 - 0.955 0.854 0.851 Mlig455_054758 {REF} {Length: 754} {NoTransDecoderORF} {RNA1509_43644} {RNA1310_8032.2} {RNA815_3380.2}
3. MligTC455_20686 474 9.88 Mlig455_041407, Mlig455_041444, Mlig455_060901

Neo: -

Age: -

Region-enriched R2: 1.932/0.02120

 2.581 - - - 0.953 0.754 0.874

Mlig455_041407 {REF} {Length: 1387} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [RH, Score=73.6, Expect=3e-17]} {RNA1509_36978} {RNA1310_41260} {RNA815_26996}

Mlig455_041444 {REF} {Length: 935} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [RH, Score=73.6, Expect=4e-17]} {RNA1509_36978} {RNA1310_41260} {RNA815_47140}

Mlig455_060901 {REF} {Length: 2316} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [RH, Score=73.6, Expect=3e-17]} {RNA1509_36978} {RNA1310_41260} {RNA815_47140}
4. MligTC455_21675 449 9.35 Mlig455_043986, Mlig455_043987, Mlig455_050701

Neo: -

Age: Up-Up-Down

 NCOA7, OXR1 2.467 - - 0.952 - 0.746 0.769

Mlig455_043986 {REF} {Length: 4824} {Pfam: TLD [PF07534.18, score=31.7]} {Human: ENSG00000111912, NCOA7, nuclear receptor coactivator 7, [Score=92.4, Expect=4e-20]} {Mouse: ENSMUSG00000039697, Ncoa7, nuclear receptor coactivator 7, [Score=86.7, Expect=3e-18]} {Dmel: FBgn0013576, mtd, mustard, [Score=93.6, Expect=7e-21]} {Celegans: WBGene00018700, lmd-3, LysM Domain (Peptidoglycan binding) protein, [Score=89.4, Expect=1e-19]} {Smed: dd_Smed_v6_5399_0_1, dd_Smed_v6_5399_0_1, [Score=87.8, Expect=3e-19]} {RNA1509_40734} {RNA1310_2824.1} {RNA815_14736}

Mlig455_043987 {REF} {Length: 700} {TRANSSPLICED} {Pfam: TLD [PF07534.18, score=66.8]; LysM domain [PF01476.22, score=29.9]} {Human: ENSG00000164830, OXR1, oxidation resistance 1, [Score=119, Expect=9e-28]} {Mouse: ENSMUSG00000022307, Oxr1, oxidation resistance 1, [Score=119, Expect=2e-27]} {Dmel: FBgn0013576, mtd, mustard, [Score=122, Expect=3e-28]} {Celegans: WBGene00018700, lmd-3, LysM Domain (Peptidoglycan binding) protein, [RH, Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_6537_0_1, dd_Smed_v6_6537_0_1, [Score=114, Expect=3e-26]} {RNA1509_59086} {RNA1310_7938} {RNA815_21372}

Mlig455_050701 {REF} {Length: 5962} {TRANSSPLICED} {Pfam: LysM domain [PF01476.22, score=31.1]} {Human: ENSG00000164830, OXR1, oxidation resistance 1, [Score=120, Expect=2e-29]} {Mouse: ENSMUSG00000022307, Oxr1, oxidation resistance 1, [Score=119, Expect=5e-30]} {Dmel: FBgn0013576, mtd, mustard, [Score=119, Expect=4e-29]} {Celegans: WBGene00018700, lmd-3, LysM Domain (Peptidoglycan binding) protein, [RH, Score=104, Expect=2e-24]} {Smed: dd_Smed_v6_5399_0_2, dd_Smed_v6_5399_0_2, [Score=50.8, Expect=5e-07]} {RNA1509_59086} {RNA1310_2824.1} {RNA815_14736}
5. MligTC455_43524 172 3.58 Mlig455_031179

Neo: -

Age: -

Region-enriched R2: 3.416/0.00534

 SLC30A2 1.857 - - - 0.886 - 0.971 Mlig455_031179 {REF} {Length: 2311} {Pfam: Cation efflux family [PF01545.23, score=155.3]; Dimerisation domain of Zinc Transporter [PF16916.7, score=21.1]} {Human: ENSG00000158014, SLC30A2, solute carrier family 30 member 2, [Score=350, Expect=3e-117]} {Mouse: ENSMUSG00000028836, Slc30a2, solute carrier family 30 (zinc transporter), member 2, [Score=362, Expect=3e-122]} {Dmel: FBgn0028516, ZnT35C, Zinc transporter 35C, [RH, Score=324, Expect=1e-106]} {Celegans: WBGene00011821, cdf-2, Cation Diffusion Facilitator family, [RH, Score=324, Expect=7e-108]} {Smed: dd_Smed_v6_5529_0_1, dd_Smed_v6_5529_0_1, [Score=432, Expect=4e-150]} {RNA1509_37229} {RNA1310_13324.1} {RNA815_5520}
6. MligTC455_24857 216 4.51 Mlig455_002823

Neo: -

Age: Up-Down-Down

Region-enriched R2: 3.504/0.03359

 FREM1 1.806 0.842 - - - 0.964 - Mlig455_002823 {REF} {Length: 6483} {Pfam: Cadherin-like [PF16184.7, score=272.5]; Frem protein N-terminal domain [PF19309.1, score=104.4]; Lectin C-type domain [PF00059.23, score=37.6]; Calx-beta domain [PF03160.16, score=22.2]} {Human: ENSG00000164946, FREM1, FRAS1 related extracellular matrix 1, [Score=233, Expect=8e-61]} {Mouse: ENSMUSG00000059049, Frem1, Fras1 related extracellular matrix protein 1, [Score=222, Expect=1e-57]} {Dmel: FBgn0032683, kon, kon-tiki, [Score=73.2, Expect=3e-12]} {Smed: dd_Smed_v6_5187_0_1, dd_Smed_v6_5187_0_1, [Score=275, Expect=5e-74]} {RNA1509_21458} {RNA1310_482.1} {RNA815_1329}
7. MligTC455_27466 46 0.96 Mlig455_013603

Neo: -

Age: -

Region-enriched R4: 4.655/0.02538

 MAP3K19 1.781 - - - - 0.829 0.952 Mlig455_013603 {REF} {Length: 4965} {Pfam: Protein kinase domain [PF00069.27, score=191.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=142.0]; Ankyrin repeats (many copies) [PF13637.8, score=91.0]; Ankyrin repeats (3 copies) [PF12796.9, score=81.0]; Ankyrin repeats (many copies) [PF13857.8, score=53.3]; Ankyrin repeat [PF13606.8, score=37.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.3]; Fungal protein kinase [PF17667.3, score=22.8]; Ankyrin repeat [PF00023.32, score=21.5]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=162, Expect=4e-40]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=164, Expect=7e-41]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=140, Expect=2e-34]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=132, Expect=7e-32]} {Smed: dd_Smed_v6_2030_0_14, dd_Smed_v6_2030_0_14, [Score=132, Expect=4e-33]} {RNA1509_34593} {RNA1310_13664} {RNA815_7939.1}
8. MligTC455_18775 130 2.71 Mlig455_043349

Neo: -

Age: -

 1.78 - - - 0.954 - 0.826 Mlig455_043349 {REF} {Length: 1583} {RNA1310_56123.1} {RNA815_28679}
9. MligTC455_23867 60 1.24 Mlig455_019756

Neo: -

Age: -

 1.728 - - - - 0.953 0.775 Mlig455_019756 {REF} {Length: 345}
10. MligTC455_42097 210 4.37 Mlig455_064897, Mlig455_064901

Neo: -

Age: -

Region-enriched R2: 3.777/0.00394

 KCTD16 1.696 - 0.745 - 0.951 - -

Mlig455_064897 {REF} {Length: 1965} {Pfam: BTB/POZ domain [PF02214.24, score=51.4]} {Human: ENSG00000183775, KCTD16, potassium channel tetramerization domain containing 16, [RH, Score=176, Expect=6e-51]} {Mouse: ENSMUSG00000051401, Kctd16, potassium channel tetramerisation domain containing 16, [RH, Score=177, Expect=1e-51]; ENSMUSG00000041633, Kctd12b, potassium channel tetramerisation domain containing 12b, [RH, Score=169, Expect=1e-49]} {Dmel: FBgn0038839, Ktl, Kctd12-like, [RH, Score=258, Expect=1e-85]} {Celegans: WBGene00014848, VM106R.1, [RH, Score=184, Expect=1e-55]} {Smed: dd_Smed_v6_12440_0_1, dd_Smed_v6_12440_0_1, [RH, Score=248, Expect=9e-82]} {RNA1310_28657.2} {RNA815_14650}

Mlig455_064901 {REF} {Length: 1674} {Pfam: BTB/POZ domain [PF02214.24, score=51.3]} {Human: ENSG00000183775, KCTD16, potassium channel tetramerization domain containing 16, [RH, Score=176, Expect=1e-50]} {Mouse: ENSMUSG00000051401, Kctd16, potassium channel tetramerisation domain containing 16, [RH, Score=177, Expect=2e-51]} {Dmel: FBgn0038839, Ktl, Kctd12-like, [RH, Score=258, Expect=3e-85]} {Celegans: WBGene00014848, VM106R.1, [RH, Score=183, Expect=3e-55]} {Smed: dd_Smed_v6_12440_0_1, dd_Smed_v6_12440_0_1, [RH, Score=247, Expect=2e-81]} {RNA1310_28657.2} {RNA815_14650}
11. MligTC455_18376 39 0.81 Mlig455_041605

Neo: -

Age: -

 1.661 - - - - 0.711 0.950 Mlig455_041605 {REF} {Length: 1674} {Pfam: Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 [PF15807.7, score=20.2]} {RNA1310_89162} {RNA815_48416}
12. MligTC455_38435 100 2.08 Mlig455_049767

Neo: -

Age: -

 PIK3CA 0.985 - - - - - 0.985 Mlig455_049767 {REF} {Length: 6778} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=164.4]; Phosphoinositide 3-kinase family, accessory domain (PIK domain) [PF00613.22, score=138.3]; Leucine-rich repeat [PF14580.8, score=72.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=67.3]; Phosphoinositide 3-kinase C2 [PF00792.26, score=55.7]; PI3-kinase family, p85-binding domain [PF02192.18, score=54.6]; Leucine rich repeat [PF13855.8, score=53.6]; PI3-kinase family, ras-binding domain [PF00794.20, score=44.7]} {Human: ENSG00000121879, PIK3CA, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [RH, Score=661, Expect=0.0]} {Mouse: ENSMUSG00000027665, Pik3ca, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [RH, Score=659, Expect=0.0]} {Dmel: FBgn0015279, Pi3K92E, [RH, Score=428, Expect=6e-127]} {Celegans: WBGene00000090, age-1, Phosphatidylinositol 3-kinase age-1, [RH, Score=340, Expect=2e-96]} {Smed: dd_Smed_v6_8025_0_1, dd_Smed_v6_8025_0_1, [RH, Score=566, Expect=4e-178]} {RNA1509_9204} {RNA1310_2625.1} {RNA815_1006}
13. MligTC455_25392 145 3.01 Mlig455_029054

Neo: -

Age: Down-Up-Down

 BIRC8 0.972 - - - - - 0.972 Mlig455_029054 {REF} {Length: 2855} {TRANSSPLICED} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=80.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=47.7]; Prokaryotic RING finger family 4 [PF14447.8, score=20.2]} {Human: ENSG00000163098, BIRC8, baculoviral IAP repeat containing 8, [RH, Score=96.7, Expect=5e-22]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [RH, Score=113, Expect=3e-26]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [RH, Score=137, Expect=2e-34]} {Celegans: WBGene00017342, F10D7.5, [Score=49.3, Expect=5e-06]} {Smed: dd_Smed_v6_1574_6_66, dd_Smed_v6_1574_6_66, [RH, Score=64.7, Expect=3e-11]} {RNA1509_10778} {RNA1310_2992.1} {RNA815_899.3}
14. MligTC455_46595 157 3.26 Mlig455_037808

Neo: -

Age: Down-Up-Down

Region-enriched R2: 2.497/0.03917

 0.972 - - - 0.972 - - Mlig455_037808 {REF} {Length: 568} {RNA1509_42203} {RNA1310_65422.2} {RNA815_30338}
15. MligTC455_22619 1671 34.82 Mlig455_007289, Mlig455_007302

Neo: -

Age: -

 SUCLA2 0.969 - - 0.969 - - -

Mlig455_007289 {REF} {Length: 2836} {Pfam: ATP-grasp domain [PF08442.12, score=221.5]; CoA-ligase [PF00549.21, score=96.1]; ATP-grasp domain [PF13549.8, score=22.1]} {Human: ENSG00000136143, SUCLA2, succinate-CoA ligase ADP-forming beta subunit, [RH, Score=582, Expect=0.0]} {Mouse: ENSMUSG00000022110, Sucla2, succinate-Coenzyme A ligase, ADP-forming, beta subunit, [RH, Score=580, Expect=0.0]} {Dmel: FBgn0037643, skap, skpA associated protein, [RH, Score=491, Expect=2e-171]} {Celegans: WBGene00009812, suca-1, Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, [RH, Score=518, Expect=0.0]} {Smed: dd_Smed_v6_2298_0_1, dd_Smed_v6_2298_0_1, [RH, Score=610, Expect=0.0]} {RNA1509_2992} {RNA1310_11624.1} {RNA815_4199.1}

Mlig455_007302 {REF} {Length: 3115} {Pfam: ATP-grasp domain [PF08442.12, score=221.5]; CoA-ligase [PF00549.21, score=96.1]; ATP-grasp domain [PF13549.8, score=22.1]} {Human: ENSG00000136143, SUCLA2, succinate-CoA ligase ADP-forming beta subunit, [RH, Score=582, Expect=0.0]} {Mouse: ENSMUSG00000022110, Sucla2, succinate-Coenzyme A ligase, ADP-forming, beta subunit, [RH, Score=580, Expect=0.0]} {Dmel: FBgn0037643, skap, skpA associated protein, [RH, Score=491, Expect=2e-171]} {Celegans: WBGene00009812, suca-1, Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, [RH, Score=518, Expect=0.0]} {Smed: dd_Smed_v6_2298_0_1, dd_Smed_v6_2298_0_1, [RH, Score=610, Expect=0.0]} {RNA1509_15358, RNA1509_2992, RNA1509_45447} {RNA1310_11624.1, RNA1509_15358, RNA1509_2992, RNA1509_45447} {RNA1509_15358, RNA1509_2992, RNA1509_45447, RNA815_4199.1}
16. MligTC455_44379 1600 33.34 Mlig455_010857, Mlig455_010889, Mlig455_033207

Neo: -

Age: -

 C1GALT1 0.968 - - - 0.968 - -

Mlig455_010857 {REF} {Length: 1465} {TRANSSPLICED} {Pfam: Fringe-like [PF02434.18, score=49.3]; Galactosyltransferase [PF01762.23, score=25.9]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=274, Expect=2e-89]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=269, Expect=1e-87]} {Dmel: FBgn0033271, CG8708, [Score=269, Expect=9e-87]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=280, Expect=9e-92]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=273, Expect=7e-90]} {RNA1509_22923} {RNA1310_21878} {RNA815_9240}

Mlig455_010889 {REF} {Length: 1465} {TRANSSPLICED} {Pfam: Fringe-like [PF02434.18, score=50.4]; Galactosyltransferase [PF01762.23, score=25.3]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=272, Expect=9e-89]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=267, Expect=4e-87]} {Dmel: FBgn0033271, CG8708, [Score=266, Expect=1e-85]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=279, Expect=1e-91]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=276, Expect=5e-91]} {RNA1509_22923} {RNA1310_21878} {RNA815_9240}

Mlig455_033207 {REF} {Length: 1463} {TRANSSPLICED} {Pfam: Fringe-like [PF02434.18, score=49.5]; Galactosyltransferase [PF01762.23, score=25.1]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=274, Expect=2e-89]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=269, Expect=9e-88]} {Dmel: FBgn0033271, CG8708, [Score=268, Expect=2e-86]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=281, Expect=3e-92]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=275, Expect=2e-90]} {RNA1509_22923} {RNA1310_21878, RNA1509_22923} {RNA1509_22923, RNA815_9240}
17. MligTC455_51648 71 1.49 Mlig455_055670

Neo: -

Age: Down-Down-Up

 0.966 - - - - - 0.966 Mlig455_055670 {REF} {Length: 3196} {Pfam: Integrase core domain [PF00665.28, score=19.1]; Integrase core domain [PF13683.8, score=19.0]} {Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=77.4, Expect=4e-18]} {RNA1509_24311} {RNA1310_35472} {RNA815_10275}
18. MligTC455_48688 206 4.3 Mlig455_067520

Neo: -

Age: -

Region-enriched R4: 5.245/0.00198

 0.961 - - - - - 0.961 Mlig455_067520 {REF} {Length: 3162} {RNA1509_30353} {RNA1310_6980.1} {RNA815_2192}
19. MligTC455_08048 40 0.82 Mlig455_038185

Neo: -

Age: -

Regeneration-upregulated R2: 6.812

Regeneration-enriched R2: 6.812

 0.958 - - - - 0.958 - Mlig455_038185 {REF} {Length: 1125} {NoTransDecoderORF}
20. MligTC455_50544 36 0.75 Mlig455_060525

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_060525 {REF} {Length: 1067} {NoTransDecoderORF}
21. MligTC455_27106 105 2.18 Mlig455_022612

Neo: -

Age: Up-Down-Down

 0.952 - - - - - 0.952 Mlig455_022612 {REF} {Length: 6144} {TRANSSPLICED} {Pfam: TIR domain [PF13676.8, score=157.1]; TIR domain [PF01582.22, score=29.6]; Death domain [PF00531.24, score=29.1]} {Smed: dd_Smed_v6_12177_0_1, dd_Smed_v6_12177_0_1, [RH, Score=638, Expect=0.0]} {RNA1509_29883, RNA1509_42445, RNA1509_47365} {RNA1310_6245, RNA1509_29883, RNA1509_42445, RNA1509_47365} {RNA1509_29883, RNA1509_42445, RNA1509_47365, RNA815_1037}
22. MligTC455_21310 180 3.75 Mlig455_018649, Mlig455_018841, Mlig455_018852

Neo: -

Age: Up-Down-Down

 FOXJ3, TNR 0.951 - - - - 0.951 -

Mlig455_018649 {REF} {Length: 1053} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=120.9]} {Human: ENSG00000116147, TNR, tenascin R, [Score=102, Expect=8e-24]; ENSG00000120332, TNN, tenascin N, [Score=97.1, Expect=4e-22]} {Mouse: ENSMUSG00000015829, Tnr, tenascin R, [Score=99.8, Expect=4e-23]; ENSMUSG00000026725, Tnn, tenascin N, [Score=97.1, Expect=3e-22]} {Dmel: FBgn0050280, CG30280, [Score=91.3, Expect=2e-21]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=85.5, Expect=1e-18]} {RNA1310_137835} {RNA815_40596}

Mlig455_018841 {REF} {Length: 7655} {Pfam: Forkhead domain [PF00250.20, score=128.6]} {Human: ENSG00000198815, FOXJ3, forkhead box J3, [RH, Score=160, Expect=5e-42]} {Mouse: ENSMUSG00000032998, Foxj3, forkhead box J3, [RH, Score=159, Expect=7e-42]} {Dmel: FBgn0004567, slp2, sloppy paired 2, [Score=125, Expect=5e-31]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=116, Expect=4e-29]} {Smed: dd_Smed_v6_12170_0_1, dd_Smed_v6_12170_0_1, [RH, Score=112, Expect=4e-26]} {RNA1509_27309} {RNA1310_20178, RNA1509_27309} {RNA1509_27309, RNA815_32223}

Mlig455_018852 {REF} {Length: 7660} {Pfam: Forkhead domain [PF00250.20, score=128.6]} {Human: ENSG00000198815, FOXJ3, forkhead box J3, [RH, Score=160, Expect=5e-42]} {Mouse: ENSMUSG00000032998, Foxj3, forkhead box J3, [RH, Score=159, Expect=7e-42]} {Dmel: FBgn0004567, slp2, sloppy paired 2, [Score=125, Expect=5e-31]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=116, Expect=4e-29]} {Smed: dd_Smed_v6_12170_0_1, dd_Smed_v6_12170_0_1, [RH, Score=112, Expect=4e-26]} {RNA1509_27309} {RNA1310_20178} {RNA815_32223}
23. MligTC455_20044 162 3.37 Mlig455_041769

Neo: -

Age: -

 AAR2 0.95 - - - - - 0.950 Mlig455_041769 {REF} {Length: 2229} {TRANSSPLICED} {Pfam: AAR2 protein [PF05282.13, score=152.5]} {Human: ENSG00000131043, AAR2, AAR2 splicing factor homolog, [RH, Score=94.0, Expect=6e-21]} {Mouse: ENSMUSG00000027628, Aar2, AAR2 splicing factor homolog, [RH, Score=90.9, Expect=6e-20]} {Dmel: FBgn0038590, CG12320, [Score=62.4, Expect=1e-10]} {Celegans: WBGene00008639, F10B5.2, Protein AAR2 homolog, [RH, Score=63.9, Expect=3e-11]} {RNA1310_11107.1} {RNA815_18909}
24. MligTC455_22935 37 0.76 Mlig455_047812

Neo: -

Age: Up-Down-Up

 TRAK1 0.95 - - - - - 0.950 Mlig455_047812 {REF} {Length: 6243} {TRANSSPLICED} {Pfam: HAP1 N-terminal conserved region [PF04849.15, score=149.7]} {Human: ENSG00000182606, TRAK1, trafficking kinesin protein 1, [Score=138, Expect=9e-33]} {Mouse: ENSMUSG00000032536, Trak1, trafficking protein, kinesin binding 1, [Score=137, Expect=1e-32]} {Dmel: FBgn0262872, milt, milton, [Score=90.9, Expect=3e-18]} {Celegans: WBGene00020838, trak-1, TRAK1 and TRAK2 related, [Score=62.4, Expect=1e-09]} {Smed: dd_Smed_v6_4847_0_1, dd_Smed_v6_4847_0_1, [Score=129, Expect=1e-30]} {RNA1509_17102} {RNA1310_4244, RNA1509_17102} {RNA1509_17102, RNA815_8925}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA