TomoSeq data search

Data search

Results for MligTC455_22684

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22684

300

6.24

Mlig455_060623

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.491

FBXL8

Mlig455_060623 {REF} {Length: 2336} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=24.9]; F-box domain [PF00646.35, score=21.8]} {Human: ENSG00000135722, FBXL8, F-box and leucine rich repeat protein 8, [RH, Score=89.0, Expect=7e-19]} {Mouse: ENSMUSG00000033313, Fbxl8, F-box and leucine-rich repeat protein 8, [RH, Score=109, Expect=5e-26]} {RNA1509_12536} {RNA1310_7458.1} {RNA815_12183}

Cumulative graph for MligTC455_22684

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.245	2.915	0.85697	1.00000
RegionR2	0.08	2.915	0.88979	1.00000
RegionR3	0.163	2.915	0.72969	1.00000
RegionR4	-0.218	2.915	0.70496	0.99237
RegionR5	0.895	2.915	0.02882	0.12598
RegionR6	1.227	2.915	0.00629	0.12633
RegionR7	-1.721	2.915	0.05180	0.43794
RegionR8	-0.18	2.915	0.82806	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.039	2.915	0.98393	1.00000
RegenerationR2	0.096	2.915	0.83341	0.99897
RegenerationR3	-0.305	2.915	0.56368	0.89116
RegenerationR4	0.6	2.915	0.26573	0.71322
RegenerationR5	0.009	2.915	0.98632	1.00000
RegenerationR6	-1.262	2.915	0.01891	0.16981
RegenerationBL	0.688	2.915	0.32214	0.68883
RegenerationTP	1.021	2.915	0.21330	0.65636

Genes with expression patterns similar to MligTC455_22684

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22684	300	6.24	Mlig455_060623	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.491	FBXL8	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_060623 {REF} {Length: 2336} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=24.9]; F-box domain [PF00646.35, score=21.8]} {Human: ENSG00000135722, FBXL8, F-box and leucine rich repeat protein 8, [RH, Score=89.0, Expect=7e-19]} {Mouse: ENSMUSG00000033313, Fbxl8, F-box and leucine-rich repeat protein 8, [RH, Score=109, Expect=5e-26]} {RNA1509_12536} {RNA1310_7458.1} {RNA815_12183}
2.	MligTC455_16741	471	9.8	Mlig455_064961	Neo: - Age: - Region-enriched R5: 1.080/0.00696	NF2	1.73	-	-	0.770	-	-	0.960	Mlig455_064961 {REF} {Length: 2815} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=50.8]; FERM N-terminal domain [PF09379.12, score=46.2]; FERM central domain [PF00373.20, score=33.2]; Ezrin/radixin/moesin family [PF00769.21, score=30.2]} {Human: ENSG00000186575, NF2, neurofibromin 2, [Score=248, Expect=2e-73]} {Mouse: ENSMUSG00000009073, Nf2, neurofibromin 2, [Score=250, Expect=2e-74]} {Dmel: FBgn0086384, Mer, Merlin, [Score=259, Expect=2e-77]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=222, Expect=2e-64]} {Smed: dd_Smed_v6_1131_0_1, dd_Smed_v6_1131_0_1, [Score=206, Expect=9e-59]} {RNA1509_28763, RNA1509_43567} {RNA1310_9789, RNA1509_28763, RNA1509_43567} {RNA1509_28763, RNA1509_43567, RNA815_21216}
3.	MligTC455_16742	453	9.44	Mlig455_066823	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.524 Region-enriched R5: 1.126/0.00482	NF2	1.691	-	-	0.730	-	-	0.961	Mlig455_066823 {REF} {Length: 3854} {TRANSSPLICED} {Pfam: CDK5 regulatory subunit-associated protein 3 [PF05600.14, score=309.6]; FERM C-terminal PH-like domain [PF09380.12, score=49.8]; FERM N-terminal domain [PF09379.12, score=39.5]; FERM central domain [PF00373.20, score=32.1]; Ezrin/radixin/moesin family [PF00769.21, score=28.3]} {Human: ENSG00000186575, NF2, neurofibromin 2, [Score=234, Expect=2e-65]} {Mouse: ENSMUSG00000009073, Nf2, neurofibromin 2, [Score=236, Expect=3e-66]} {Dmel: FBgn0086384, Mer, Merlin, [Score=240, Expect=1e-67]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=210, Expect=5e-58]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [Score=193, Expect=2e-52]} {RNA1509_28763} {RNA1310_9789} {RNA815_6590}
4.	MligTC455_20121	1107	23.07	Mlig455_055488, Mlig455_055508	Neo: - Age: -	CCDC88A, CCDC88C	1.668	-	-	-	0.718	-	0.950	Mlig455_055488 {REF} {Length: 3881} {Pfam: HOOK domain [PF19047.2, score=43.8]} {Human: ENSG00000115355, CCDC88A, coiled-coil domain containing 88A, [Score=95.1, Expect=2e-19]} {Mouse: ENSMUSG00000021182, Ccdc88c, coiled-coil domain containing 88C, [Score=105, Expect=9e-23]} {Dmel: FBgn0283724, Girdin, [Score=62.0, Expect=1e-09]} {Smed: dd_Smed_v6_3591_0_1, dd_Smed_v6_3591_0_1, [RH, Score=237, Expect=3e-69]} {RNA1509_55316, RNA1509_8799} {RNA1310_10467.1, RNA1509_55316} {RNA1509_55316, RNA815_3537} Mlig455_055508 {REF} {Length: 3784} {Pfam: HOOK domain [PF19047.2, score=43.2]} {Human: ENSG00000015133, CCDC88C, coiled-coil domain containing 88C, [Score=99.8, Expect=6e-21]; ENSG00000115355, CCDC88A, coiled-coil domain containing 88A, [Score=95.1, Expect=2e-19]} {Mouse: ENSMUSG00000021182, Ccdc88c, coiled-coil domain containing 88C, [Score=106, Expect=4e-23]} {Dmel: FBgn0283724, Girdin, [Score=62.4, Expect=1e-09]} {Smed: dd_Smed_v6_3591_0_1, dd_Smed_v6_3591_0_1, [RH, Score=233, Expect=8e-68]} {RNA1509_31386, RNA1509_53959, RNA1509_54054, RNA1509_8799} {RNA1310_10467.1, RNA1509_31386, RNA1509_53959, RNA1509_54054} {RNA1509_31386, RNA1509_53959, RNA1509_54054, RNA815_3537}
5.	MligTC455_34508	328	6.82	Mlig455_053465	Neo: Irradiation Age: Up-Down-Up, logFC(26M/2M)=0.335	SLBP	0.961	-	-	-	-	-	0.961	Mlig455_053465 {REF} {Length: 2264} {TRANSSPLICED} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=83.1]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=86.7, Expect=2e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=86.3, Expect=2e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=6e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=1e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=103, Expect=2e-25]} {RNA1509_27390, RNA1509_37378, RNA1509_43645} {RNA1310_22526.2, RNA1509_27390, RNA1509_37378, RNA1509_43645} {RNA1509_27390, RNA1509_37378, RNA1509_43645, RNA815_16079}
6.	MligTC455_33938	921	19.18	Mlig455_043743, Mlig455_047482	Neo: - Age: -	HNRNPH2, TBC1D24	0.958	-	0.958	-	-	-	-	Mlig455_043743 {REF} {Length: 3480} {Pfam: TLD [PF07534.18, score=56.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=35.8]} {Human: ENSG00000162065, TBC1D24, TBC1 domain family member 24, [Score=102, Expect=8e-22]} {Mouse: ENSMUSG00000036473, Tbc1d24, TBC1 domain family, member 24, [Score=99.4, Expect=4e-21]} {Dmel: FBgn0032901, sky, skywalker, [Score=111, Expect=4e-25]} {Celegans: WBGene00016292, tbc-7, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=92.0, Expect=6e-19]} {Smed: dd_Smed_v6_5542_0_1, dd_Smed_v6_5542_0_1, [Score=109, Expect=5e-25]} {RNA1509_8289} {RNA1310_8633.1} {RNA815_10795} Mlig455_047482 {REF} {Length: 4001} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.0]; TLD [PF07534.18, score=56.1]} {Human: ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [Score=133, Expect=2e-32]; ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [Score=130, Expect=7e-34]; ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [Score=130, Expect=1e-31]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [Score=129, Expect=3e-31]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [Score=133, Expect=2e-32]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [Score=131, Expect=3e-32]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [Score=130, Expect=1e-31]} {Dmel: FBgn0259139, glo, glorund, [Score=122, Expect=2e-28]} {Celegans: WBGene00006367, sym-2, RNA-binding protein sym-2, [Score=114, Expect=3e-27]} {Smed: dd_Smed_v6_2383_0_7, dd_Smed_v6_2383_0_7, [Score=116, Expect=4e-29]} {RNA1509_5104} {RNA1310_8633.1} {RNA815_10795}
7.	MligTC455_47728	808	16.83	Mlig455_027519	Neo: Int S/G2/M Age: -	DHX37	0.957	-	-	-	-	-	0.957	Mlig455_027519 {REF} {Length: 3244} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=77.3]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=49.5]; Helicase conserved C-terminal domain [PF00271.33, score=44.8]; DEAD/DEAH box helicase [PF00270.31, score=39.2]; AAA domain [PF13604.8, score=21.4]; AAA domain [PF13245.8, score=20.0]} {Human: ENSG00000150990, DHX37, DEAH-box helicase 37, [RH, Score=617, Expect=0.0]} {Mouse: ENSMUSG00000029480, Dhx37, DEAH (Asp-Glu-Ala-His) box polypeptide 37, [RH, Score=636, Expect=0.0]} {Dmel: FBgn0001330, kz, kurz, [RH, Score=642, Expect=0.0]} {Celegans: WBGene00015525, rha-2, Putative ATP-dependent RNA helicase rha-2, [RH, Score=555, Expect=6e-180]} {Smed: dd_Smed_v6_10340_0_1, dd_Smed_v6_10340_0_1, [RH, Score=594, Expect=0.0]} {RNA1509_10043, RNA1509_25646} {RNA1310_4392, RNA1509_10043, RNA1509_25646} {RNA1509_10043, RNA1509_25646, RNA815_1308.1}
8.	MligTC455_52592	831	17.31	Mlig455_066163, Mlig455_066164, Mlig455_066165, Mlig455_066166, Mlig455_066167	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_066163 {REF} {Length: 958} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_17465} {RNA1310_78464} {RNA815_47636} Mlig455_066164 {REF} {Length: 956} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_17465} {RNA1310_78464} {RNA815_47636} Mlig455_066165 {REF} {Length: 1022} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_17465} {RNA1310_78464} {RNA815_47636} Mlig455_066166 {REF} {Length: 956} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22412} {RNA1310_78464} {RNA815_47636} Mlig455_066167 {REF} {Length: 954} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_17465} {RNA1310_78464} {RNA815_47636}

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