TomoSeq data search

Data search

Results for MligTC455_16741

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16741

471

9.80

Mlig455_064961

Neo: -

Age: -

Region-enriched R5: 1.080/0.00696

NF2

Mlig455_064961 {REF} {Length: 2815} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=50.8]; FERM N-terminal domain [PF09379.12, score=46.2]; FERM central domain [PF00373.20, score=33.2]; Ezrin/radixin/moesin family [PF00769.21, score=30.2]} {Human: ENSG00000186575, NF2, neurofibromin 2, [Score=248, Expect=2e-73]} {Mouse: ENSMUSG00000009073, Nf2, neurofibromin 2, [Score=250, Expect=2e-74]} {Dmel: FBgn0086384, Mer, Merlin, [Score=259, Expect=2e-77]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=222, Expect=2e-64]} {Smed: dd_Smed_v6_1131_0_1, dd_Smed_v6_1131_0_1, [Score=206, Expect=9e-59]} {RNA1509_28763, RNA1509_43567} {RNA1310_9789, RNA1509_28763, RNA1509_43567} {RNA1509_28763, RNA1509_43567, RNA815_21216}

Cumulative graph for MligTC455_16741

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.519	3.756	0.64881	1.00000
RegionR2	0.071	3.756	0.88883	1.00000
RegionR3	-0.934	3.756	0.02916	0.29248
RegionR4	-0.198	3.756	0.69068	0.98217
RegionR5	1.08	3.756	0.00062	0.00696
RegionR6	0.537	3.756	0.15942	0.71188
RegionR7	-0.136	3.756	0.82106	1.00000
RegionR8	-0.94	3.756	0.28500	0.91217

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.236	3.756	0.07839	0.76995
RegenerationR2	-0.476	3.756	0.23701	0.68472
RegenerationR3	0.375	3.756	0.42362	0.81766
RegenerationR4	-0.401	3.756	0.36430	0.78977
RegenerationR5	-0.696	3.756	0.05401	0.37313
RegenerationR6	-1.734	3.756	0.00022	0.01419
RegenerationBL	0.419	3.756	0.48321	0.84848
RegenerationTP	0.217	3.756	0.76175	1.00000

Genes with expression patterns similar to MligTC455_16741

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16741	471	9.8	Mlig455_064961	Neo: - Age: - Region-enriched R5: 1.080/0.00696	NF2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_064961 {REF} {Length: 2815} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=50.8]; FERM N-terminal domain [PF09379.12, score=46.2]; FERM central domain [PF00373.20, score=33.2]; Ezrin/radixin/moesin family [PF00769.21, score=30.2]} {Human: ENSG00000186575, NF2, neurofibromin 2, [Score=248, Expect=2e-73]} {Mouse: ENSMUSG00000009073, Nf2, neurofibromin 2, [Score=250, Expect=2e-74]} {Dmel: FBgn0086384, Mer, Merlin, [Score=259, Expect=2e-77]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=222, Expect=2e-64]} {Smed: dd_Smed_v6_1131_0_1, dd_Smed_v6_1131_0_1, [Score=206, Expect=9e-59]} {RNA1509_28763, RNA1509_43567} {RNA1310_9789, RNA1509_28763, RNA1509_43567} {RNA1509_28763, RNA1509_43567, RNA815_21216}
2.	MligTC455_16742	453	9.44	Mlig455_066823	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.524 Region-enriched R5: 1.126/0.00482	NF2	5.878	0.998	1.000	0.993	0.949	0.941	0.997	Mlig455_066823 {REF} {Length: 3854} {TRANSSPLICED} {Pfam: CDK5 regulatory subunit-associated protein 3 [PF05600.14, score=309.6]; FERM C-terminal PH-like domain [PF09380.12, score=49.8]; FERM N-terminal domain [PF09379.12, score=39.5]; FERM central domain [PF00373.20, score=32.1]; Ezrin/radixin/moesin family [PF00769.21, score=28.3]} {Human: ENSG00000186575, NF2, neurofibromin 2, [Score=234, Expect=2e-65]} {Mouse: ENSMUSG00000009073, Nf2, neurofibromin 2, [Score=236, Expect=3e-66]} {Dmel: FBgn0086384, Mer, Merlin, [Score=240, Expect=1e-67]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=210, Expect=5e-58]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [Score=193, Expect=2e-52]} {RNA1509_28763} {RNA1310_9789} {RNA815_6590}
3.	MligTC455_47349	1450	30.22	Mlig455_010530, Mlig455_061804	Neo: Neoblast, stringent Age: - Region-enriched R5: 1.675/0.00004 Region-enriched R4: 1.345/0.03938	DNMT3B	2.464	-	-	0.777	0.723	-	0.964	Mlig455_010530 {REF} {Length: 2248} {TRANSSPLICED} {Pfam: Cysteine rich ADD domain in DNMT3 [PF17980.3, score=29.7]} {Human: ENSG00000088305, DNMT3B, DNA methyltransferase 3 beta, [Score=89.0, Expect=1e-17]} {Mouse: ENSMUSG00000027478, Dnmt3b, DNA methyltransferase 3B, [Score=97.1, Expect=2e-20]; ENSMUSG00000082079, Dnmt3c, DNA methyltransferase 3C, [Score=94.7, Expect=1e-19]} {RNA1509_23149} {RNA1310_10697.1, RNA1509_23149} {RNA1509_23149, RNA815_14886} Mlig455_061804 {REF} {Length: 2249} {TRANSSPLICED} {Pfam: Cysteine rich ADD domain in DNMT3 [PF17980.3, score=29.7]} {Human: ENSG00000088305, DNMT3B, DNA methyltransferase 3 beta, [Score=89.4, Expect=9e-18]} {Mouse: ENSMUSG00000027478, Dnmt3b, DNA methyltransferase 3B, [Score=97.1, Expect=2e-20]; ENSMUSG00000082079, Dnmt3c, DNA methyltransferase 3C, [Score=94.7, Expect=9e-20]} {RNA1509_23149} {RNA1310_10697.1} {RNA815_14886}
4.	MligTC455_22684	300	6.24	Mlig455_060623	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.491	FBXL8	1.73	-	-	0.770	-	-	0.960	Mlig455_060623 {REF} {Length: 2336} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=24.9]; F-box domain [PF00646.35, score=21.8]} {Human: ENSG00000135722, FBXL8, F-box and leucine rich repeat protein 8, [RH, Score=89.0, Expect=7e-19]} {Mouse: ENSMUSG00000033313, Fbxl8, F-box and leucine-rich repeat protein 8, [RH, Score=109, Expect=5e-26]} {RNA1509_12536} {RNA1310_7458.1} {RNA815_12183}
5.	MligTC455_12932	233	4.86	Mlig455_068053	Neo: - Age: Down-Down-Up Region-enriched R2: 2.157/0.04323	ANKRD40	1.722	-	-	0.770	-	-	0.952	Mlig455_068053 {REF} {Length: 4350} {Pfam: OCRE domain [PF17780.3, score=45.6]; Ankyrin repeats (many copies) [PF13637.8, score=34.0]; Ankyrin repeat [PF00023.32, score=31.1]; Ankyrin repeats (3 copies) [PF12796.9, score=30.9]; Ankyrin repeats (many copies) [PF13857.8, score=25.7]; Ankyrin repeat [PF13606.8, score=19.8]} {Human: ENSG00000154945, ANKRD40, ankyrin repeat domain 40, [RH, Score=94.0, Expect=6e-20]} {Mouse: ENSMUSG00000020864, Ankrd40, ankyrin repeat domain 40, [RH, Score=93.2, Expect=7e-20]} {Dmel: FBgn0031319, CG4896, [Score=57.4, Expect=4e-08]} {Celegans: WBGene00011270, R31.2, [RH, Score=83.6, Expect=1e-16]} {Smed: dd_Smed_v6_2392_0_2, dd_Smed_v6_2392_0_2, [Score=58.2, Expect=1e-08]} {RNA1509_49616, RNA1509_49906} {RNA1310_18118, RNA1509_49906} {RNA1509_49906, RNA815_7502}
6.	MligTC455_37564	735	15.3	Mlig455_056763	Neo: - Age: - Region-enriched R5: 1.044/0.02419	YLPM1	1.651	-	-	-	-	0.700	0.951	Mlig455_056763 {REF} {Length: 3645} {TRANSSPLICED} {Pfam: AAA ATPase domain [PF13191.8, score=23.2]} {Human: ENSG00000119596, YLPM1, YLP motif containing 1, [RH, Score=206, Expect=2e-53]} {Mouse: ENSMUSG00000021244, Ylpm1, YLP motif containing 1, [RH, Score=219, Expect=1e-57]} {Dmel: FBgn0052685, ZAP3, [RH, Score=216, Expect=6e-57]} {Smed: dd_Smed_v6_6970_0_1, dd_Smed_v6_6970_0_1, [RH, Score=191, Expect=1e-51]} {RNA1509_21173} {RNA1310_4180.1} {RNA815_3851.1}
7.	MligTC455_33761	429	8.94	Mlig455_016903	Neo: Int S/G2/M Age: -		0.957	-	-	-	-	-	0.957	Mlig455_016903 {REF} {Length: 791} {NoTransDecoderORF} {RNA1509_46841} {RNA1310_27335} {RNA815_2544.1}
8.	MligTC455_47358	1800	37.49	Mlig455_003340	Neo: - Age: Down-Down-Up, logFC(26M/2M)=2.098	COA5	0.956	-	-	-	-	-	0.956	Mlig455_003340 {REF} {Length: 1303} {TRANSSPLICED} {Pfam: Cytochrome c oxidase assembly protein PET191 [PF10203.11, score=79.2]} {Human: ENSG00000183513, COA5, cytochrome c oxidase assembly factor 5, [RH, Score=60.1, Expect=4e-13]} {Dmel: FBgn0040751, CG13018, [RH, Score=63.2, Expect=2e-14]} {Smed: dd_Smed_v6_2639_0_1, dd_Smed_v6_2639_0_1, [RH, Score=71.6, Expect=5e-18]} {RNA1509_3262} {RNA1310_26754, RNA1509_3262} {RNA1509_3262, RNA815_11640}
9.	MligTC455_15857	1438	29.96	Mlig455_021333	Neo: - Age: -	HMGCS1	0.955	-	-	-	-	-	0.955	Mlig455_021333 {REF} {Length: 2055} {TRANSSPLICED} {Pfam: Hydroxymethylglutaryl-coenzyme A synthase C terminal [PF08540.12, score=270.1]; Hydroxymethylglutaryl-coenzyme A synthase N terminal [PF01154.19, score=268.9]} {Human: ENSG00000112972, HMGCS1, 3-hydroxy-3-methylglutaryl-CoA synthase 1, [RH, Score=418, Expect=2e-142]; ENSG00000134240, HMGCS2, 3-hydroxy-3-methylglutaryl-CoA synthase 2, [RH, Score=410, Expect=3e-139]} {Mouse: ENSMUSG00000027875, Hmgcs2, 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2, [RH, Score=425, Expect=3e-145]; ENSMUSG00000093930, Hmgcs1, 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1, [RH, Score=416, Expect=1e-141]} {Dmel: FBgn0010611, Hmgs, HMG Coenzyme A synthase, [RH, Score=452, Expect=1e-156]} {Celegans: WBGene00017769, hmgs-1, Hydroxymethylglutaryl-CoA synthase, [RH, Score=347, Expect=2e-115]} {Smed: dd_Smed_v6_2847_0_1, dd_Smed_v6_2847_0_1, [RH, Score=378, Expect=2e-128]} {RNA1509_56340, RNA1509_9086} {RNA1310_11344.1, RNA1509_56340, RNA1509_9086} {RNA1509_56340, RNA1509_9086, RNA815_4806}
10.	MligTC455_48832	175	3.64	Mlig455_049173	Neo: - Age: - Region-enriched R5: 2.493/0.03133 Regeneration-upregulated BL: 4.384 Regeneration-enriched BL: 4.384		0.955	-	-	-	-	-	0.955	Mlig455_049173 {REF} {Length: 2999} {RNA1509_10362} {RNA1310_2269.1} {RNA815_8540}
11.	MligTC455_40487	472	9.84	Mlig455_013799	Neo: Irradiation Age: -	RBM19	0.954	-	-	-	-	-	0.954	Mlig455_013799 {REF} {Length: 3052} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=191.3]; Occluded RNA-recognition motif [PF16842.7, score=20.2]} {Human: ENSG00000122965, RBM19, RNA binding motif protein 19, [RH, Score=258, Expect=2e-73]} {Mouse: ENSMUSG00000029594, Rbm19, RNA binding motif protein 19, [RH, Score=264, Expect=3e-76]} {Dmel: FBgn0036018, CG3335, [RH, Score=236, Expect=3e-66]} {Celegans: WBGene00004315, rbd-1, RBD (RNA binding domain) protein, [RH, Score=280, Expect=3e-82]} {Smed: dd_Smed_v6_7697_0_1, dd_Smed_v6_7697_0_1, [RH, Score=259, Expect=2e-77]} {RNA1509_10471, RNA1509_26507, RNA1509_46812} {RNA1310_6427.1, RNA1509_10471, RNA1509_26507, RNA1509_46812} {RNA1509_10471, RNA1509_26507, RNA1509_46812, RNA815_2473}
12.	MligTC455_48808	694	14.47	Mlig455_061838	Neo: - Age: - Region-enriched R4: 1.152/0.03533	CNOT10	0.953	-	-	-	-	-	0.953	Mlig455_061838 {REF} {Length: 4193} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=33.7]; Tetratricopeptide repeat [PF13428.8, score=27.5]; Tetratricopeptide repeat [PF13181.8, score=26.8]; Tetratricopeptide repeat [PF00515.30, score=26.5]; Tetratricopeptide repeat [PF14559.8, score=21.6]; Tetratricopeptide repeat [PF13374.8, score=19.4]} {Human: ENSG00000182973, CNOT10, CCR4-NOT transcription complex subunit 10, [RH, Score=323, Expect=5e-99]} {Mouse: ENSMUSG00000056167, Cnot10, CCR4-NOT transcription complex, subunit 10, [RH, Score=330, Expect=8e-102]} {Dmel: FBgn0260444, Not10, CCR4-NOT transcription complex subunit 10, [RH, Score=99.4, Expect=3e-21]} {Smed: dd_Smed_v6_7843_0_1, dd_Smed_v6_7843_0_1, [RH, Score=287, Expect=5e-87]} {RNA1509_8416} {RNA1310_7100.1} {RNA815_2833}
13.	MligTC455_20971	998	20.79	Mlig455_059885	Neo: Int S/G2/M Age: Down-Down-Up, logFC(26M/2M)=0.300	DDX55	0.952	-	-	-	-	0.952	-	Mlig455_059885 {REF} {Length: 1968} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=125.2]; Helicase conserved C-terminal domain [PF00271.33, score=68.0]; Domain of unknown function (DUF4217) [PF13959.8, score=61.3]; Type III restriction enzyme, res subunit [PF04851.17, score=20.9]} {Human: ENSG00000111364, DDX55, DEAD-box helicase 55, [RH, Score=453, Expect=8e-153]} {Mouse: ENSMUSG00000029389, Ddx55, DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, [RH, Score=465, Expect=1e-157]} {Dmel: FBgn0037561, CG9630, [RH, Score=412, Expect=5e-137]} {Celegans: WBGene00013983, ZK512.2, Probable ATP-dependent RNA helicase DDX55 homolog, [RH, Score=282, Expect=2e-87]} {Smed: dd_Smed_v6_7797_0_1, dd_Smed_v6_7797_0_1, [RH, Score=331, Expect=1e-106]} {RNA1509_14720, RNA1509_16917, RNA1509_27410} {RNA1310_2745.1, RNA1509_14720, RNA1509_16917, RNA1509_27410} {RNA1509_14720, RNA1509_16917, RNA1509_27410, RNA815_5402}
14.	MligTC455_35291	234	4.88	Mlig455_027788, Mlig455_063457	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.963 Region-enriched R4: 3.530/0.01207 Region-enriched R5: 2.680/0.00642	TMEM9	0.952	-	-	-	0.952	-	-	Mlig455_027788 {REF} {Length: 2035} {TRANSSPLICED} {Pfam: TMEM9 [PF05434.13, score=50.6]} {RNA1509_36378} {RNA1310_37814.1, RNA1509_36378} {RNA1509_36378, RNA815_28046} Mlig455_063457 {REF} {Length: 2038} {TRANSSPLICED} {Pfam: TMEM9 [PF05434.13, score=65.9]} {Human: ENSG00000116857, TMEM9, transmembrane protein 9, [Score=46.6, Expect=8e-06]} {Celegans: WBGene00020026, R12C12.6, [RH, Score=57.0, Expect=2e-09]} {RNA1509_36378} {RNA1310_37814.1} {RNA815_28046}
15.	MligTC455_19077	965	20.1	Mlig455_056290, Mlig455_056316	Neo: Int S/G2/M Age: - Region-enriched R4: 1.308/0.04677	JADE1	0.951	-	-	-	-	-	0.951	Mlig455_056290 {REF} {Length: 4617} {Pfam: PHD-zinc-finger like domain [PF13832.8, score=100.9]; PHD-like zinc-binding domain [PF13771.8, score=86.2]; PHD-finger [PF13831.8, score=43.3]; PHD-finger [PF00628.31, score=40.9]; Prokaryotic RING finger family 1 [PF14446.8, score=22.0]} {Human: ENSG00000077684, JADE1, jade family PHD finger 1, [RH, Score=278, Expect=2e-79]; ENSG00000102221, JADE3, jade family PHD finger 3, [RH, Score=277, Expect=7e-79]; ENSG00000043143, JADE2, jade family PHD finger 2, [RH, Score=274, Expect=7e-78]} {Mouse: ENSMUSG00000025764, Jade1, jade family PHD finger 1, [RH, Score=278, Expect=2e-79]; ENSMUSG00000037315, Jade3, jade family PHD finger 3, [RH, Score=274, Expect=4e-78]; ENSMUSG00000020387, Jade2, jade family PHD finger 2, [RH, Score=273, Expect=1e-77]} {Dmel: FBgn0035106, rno, rhinoceros, [RH, Score=296, Expect=8e-83]} {Celegans: WBGene00006975, zfp-1, isoform a, [Score=140, Expect=1e-33]} {Smed: dd_Smed_v6_11492_0_2, dd_Smed_v6_11492_0_2, [RH, Score=249, Expect=3e-70]} {RNA1509_23754, RNA1509_29182, RNA1509_56024} {RNA1310_2765.2, RNA1509_23754, RNA1509_29182, RNA1509_56024} {RNA1509_23754, RNA1509_29182, RNA1509_56024, RNA815_2863} Mlig455_056316 {REF} {Length: 4168} {TRANSSPLICED} {Pfam: PHD-zinc-finger like domain [PF13832.8, score=100.9]; PHD-like zinc-binding domain [PF13771.8, score=86.2]; PHD-finger [PF13831.8, score=43.3]; PHD-finger [PF00628.31, score=40.9]; Prokaryotic RING finger family 1 [PF14446.8, score=22.0]} {Human: ENSG00000077684, JADE1, jade family PHD finger 1, [RH, Score=280, Expect=8e-80]; ENSG00000102221, JADE3, jade family PHD finger 3, [RH, Score=277, Expect=5e-79]; ENSG00000043143, JADE2, jade family PHD finger 2, [RH, Score=274, Expect=7e-78]} {Mouse: ENSMUSG00000025764, Jade1, jade family PHD finger 1, [RH, Score=280, Expect=5e-80]; ENSMUSG00000037315, Jade3, jade family PHD finger 3, [RH, Score=276, Expect=1e-78]; ENSMUSG00000020387, Jade2, jade family PHD finger 2, [RH, Score=273, Expect=9e-78]} {Dmel: FBgn0035106, rno, rhinoceros, [RH, Score=296, Expect=1e-82]} {Celegans: WBGene00006975, zfp-1, isoform a, [Score=140, Expect=1e-33]} {Smed: dd_Smed_v6_11492_0_2, dd_Smed_v6_11492_0_2, [RH, Score=251, Expect=4e-71]} {RNA1509_56024} {RNA1310_2808} {RNA815_2863}
16.	MligTC455_47426	204	4.25	Mlig455_002149	Neo: Int S/G2/M Age: Down-Down-Up	CNEP1R1	0.951	-	-	-	-	-	0.951	Mlig455_002149 {REF} {Length: 1917} {TRANSSPLICED} {Pfam: Transmembrane protein 188 [PF09771.11, score=133.1]} {Human: ENSG00000205423, CNEP1R1, CTD nuclear envelope phosphatase 1 regulatory subunit 1, [RH, Score=120, Expect=1e-35]} {Mouse: ENSMUSG00000036810, Cnep1r1, CTD nuclear envelope phosphatase 1 regulatory subunit 1, [RH, Score=120, Expect=8e-36]} {Dmel: FBgn0036090, CG8009, [RH, Score=111, Expect=2e-32]} {Celegans: WBGene00011828, nepr-1, Nuclear envelope phosphatase-regulatory subunit 1 homolog, [RH, Score=78.6, Expect=1e-19]} {Smed: dd_Smed_v6_7741_0_1, dd_Smed_v6_7741_0_1, [RH, Score=99.0, Expect=9e-28]} {RNA1509_14702} {RNA1310_22488} {RNA815_26788}

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