Data search


search
Exact
Search

Results for MligTC455_22724

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22724 55 1.14 Mlig455_025091

Neo: -

Age: -

Mlig455_025091 {REF} {Length: 2765} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=23.7]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_16253.1}

Cumulative graph for MligTC455_22724

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.363 1.376 0.99949 1.00000
RegionR2 2.794 1.376 0.09678 0.38185
RegionR3 -0.609 1.376 0.99961 1.00000
RegionR4 0.461 1.376 0.43306 0.76205
RegionR5 -0.484 1.376 0.91583 1.00000
RegionR6 1.368 1.376 0.27888 0.86893
RegionR7 -1.321 1.376 0.99963 1.00000
RegionR8 -0.846 1.376 0.99963 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.099 1.376 0.99997 1.00000
RegenerationR2 0.807 1.376 0.41534 0.82401
RegenerationR3 3.475 1.376 0.04709 0.37816
RegenerationR4 1.469 1.376 0.27349 0.71948
RegenerationR5 2.925 1.376 0.03317 0.30315
RegenerationR6 1.243 1.376 0.40239 0.73922
RegenerationBL -0.086 1.376 0.75876 1.00000
RegenerationTP 4.2 1.376 0.11554 0.52040


Genes with expression patterns similar to MligTC455_22724

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22724 55 1.14 Mlig455_025091

Neo: -

Age: -

3 - - 1.000 - 1.000 1.000 Mlig455_025091 {REF} {Length: 2765} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=23.7]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_16253.1}
2. MligTC455_29537 394 8.21 Mlig455_037986, Mlig455_043226, Mlig455_043771, Mlig455_044190, Mlig455_068627

Neo: -

Age: -

1.783 - - - - 0.817 0.966

Mlig455_037986 {REF} {Length: 729} {RNA1310_48817} {RNA815_318.1}

Mlig455_043226 {REF} {Length: 610} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_1374.1} {RNA815_43995.1}

Mlig455_043771 {REF} {Length: 5753} {RNA1509_40552, RNA1509_57189} {RNA1310_1374.1, RNA1509_40552, RNA1509_57189} {RNA1509_40552, RNA1509_57189, RNA815_318.1}

Mlig455_044190 {REF} {Length: 804} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_1374.1} {RNA815_43995.1}

Mlig455_068627 {REF} {Length: 1191} {NoTransDecoderORF} {RNA1509_40552} {RNA1310_48817} {RNA815_48299}
3. MligTC455_46952 43 0.9 Mlig455_031219

Neo: -

Age: -

Region-enriched R4: 5.444/0.03746

1.778 - - 0.828 - - 0.950 Mlig455_031219 {REF} {Length: 735}
4. MligTC455_37441 157 3.28 Mlig455_055697

Neo: -

Age: -

1.777 - - - - 0.827 0.950 Mlig455_055697 {REF} {Length: 2393} {RNA1509_10526} {RNA1310_31711} {RNA815_17406}
5. MligTC455_49251 62 1.29 Mlig455_049389

Neo: -

Age: -

FOLR2 1.746 - - 0.987 - - 0.759 Mlig455_049389 {REF} {Length: 1533} {TRANSSPLICED} {Pfam: Folate receptor family [PF03024.16, score=126.4]} {Human: ENSG00000165457, FOLR2, folate receptor beta, [RH, Score=126, Expect=2e-34]; ENSG00000110203, FOLR3, folate receptor 3, [RH, Score=124, Expect=1e-33]} {Mouse: ENSMUSG00000032725, Folr2, folate receptor 2 (fetal), [RH, Score=123, Expect=2e-33]; ENSMUSG00000001827, Folr1, folate receptor 1 (adult), [RH, Score=121, Expect=9e-33]} {Smed: dd_Smed_v6_8103_0_1, dd_Smed_v6_8103_0_1, [RH, Score=158, Expect=2e-47]} {RNA1509_23353} {RNA1310_17821, RNA1509_23353} {RNA1509_23353, RNA815_16281}
6. MligTC455_40591 172 3.59 Mlig455_030159

Neo: -

Age: -

1.706 - - 0.954 - - 0.752 Mlig455_030159 {REF} {Length: 3255} {NoTransDecoderORF} {RNA1509_25825} {RNA1310_58828.3} {RNA815_37716}
7. MligTC455_01799 70 1.46 Mlig455_038552

Neo: -

Age: -

0.975 - - - - - 0.975 Mlig455_038552 {REF} {Length: 658} {NoTransDecoderORF} {RNA1509_6341} {RNA1310_13441.1} {RNA815_5624}
8. MligTC455_50246 420 8.75 Mlig455_056379

Neo: -

Age: Down-Up-Up

0.969 - - - - 0.969 - Mlig455_056379 {REF} {Length: 768} {NoTransDecoderORF} {RNA1509_21100} {RNA1310_47245} {RNA815_25700}
9. MligTC455_49252 89 1.85 Mlig455_062278

Neo: -

Age: logFC(26M/2M)=0.298

FOLR2 0.968 - - 0.968 - - - Mlig455_062278 {REF} {Length: 3000} {TRANSSPLICED} {Pfam: Folate receptor family [PF03024.16, score=126.0]} {Human: ENSG00000165457, FOLR2, folate receptor beta, [RH, Score=126, Expect=2e-34]; ENSG00000110203, FOLR3, folate receptor 3, [RH, Score=124, Expect=1e-33]} {Mouse: ENSMUSG00000032725, Folr2, folate receptor 2 (fetal), [RH, Score=124, Expect=1e-33]; ENSMUSG00000001827, Folr1, folate receptor 1 (adult), [RH, Score=120, Expect=2e-32]} {Smed: dd_Smed_v6_8103_0_1, dd_Smed_v6_8103_0_1, [RH, Score=155, Expect=3e-46]} {RNA1509_17845, RNA1509_23353, RNA1509_24248} {RNA1310_17821, RNA1509_17845, RNA1509_24248} {RNA1509_17845, RNA1509_24248, RNA815_16281}
10. MligTC455_15990 53 1.1 Mlig455_053183

Neo: -

Age: -

0.964 - - - - - 0.964 Mlig455_053183 {REF} {Length: 1875} {RNA1310_81425}
11. MligTC455_38967 71 1.48 Mlig455_060741

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.569

Region-enriched R2: 3.815/0.00926
Region-enriched R7: 3.563/0.01797

UTRN 0.962 - - 0.962 - - - Mlig455_060741 {REF} {Length: 4727} {Pfam: EF-hand [PF09069.13, score=127.4]; EF hand [PF09068.13, score=102.4]; Zinc finger, ZZ type [PF00569.19, score=37.7]; WW domain [PF00397.28, score=18.6]} {Human: ENSG00000152818, UTRN, utrophin, [RH, Score=493, Expect=5e-147]; ENSG00000198947, DMD, dystrophin, [RH, Score=489, Expect=1e-150]} {Mouse: ENSMUSG00000019820, Utrn, utrophin, [RH, Score=493, Expect=2e-156]; ENSMUSG00000045103, Dmd, dystrophin, muscular dystrophy, [RH, Score=487, Expect=3e-145]} {Dmel: FBgn0260003, Dys, Dystrophin, [RH, Score=516, Expect=4e-155]} {Celegans: WBGene00001131, dys-1, Dystrophin-1, [RH, Score=337, Expect=1e-95]} {Smed: dd_Smed_v6_5325_0_6, dd_Smed_v6_5325_0_6, [RH, Score=295, Expect=4e-82]} {RNA1509_38827} {RNA1310_24533} {RNA815_12379}
12. MligTC455_48192 17 0.36 Mlig455_020984

Neo: -

Age: Down-Down-Up

DLG1 0.962 - - 0.962 - - - Mlig455_020984 {REF} {Length: 2812} {Pfam: Guanylate kinase [PF00625.23, score=174.6]; PDZ domain [PF00595.26, score=49.2]; Variant SH3 domain [PF07653.19, score=34.8]; SH3 domain [PF00018.30, score=30.1]; PDZ domain [PF17820.3, score=19.7]} {Human: ENSG00000075711, DLG1, discs large MAGUK scaffold protein 1, [Score=430, Expect=1e-137]; ENSG00000150672, DLG2, discs large MAGUK scaffold protein 2, [Score=426, Expect=4e-135]} {Mouse: ENSMUSG00000052572, Dlg2, discs large MAGUK scaffold protein 2, [RH, Score=426, Expect=1e-141]} {Dmel: FBgn0001624, dlg1, discs large 1, [RH, Score=437, Expect=4e-140]} {Celegans: WBGene00001006, dlg-1, Drosophila Discs LarGe homolog; MAGUK protein DLG-1; SAP97-like protein DLG-1, [Score=345, Expect=2e-105]} {Smed: dd_Smed_v6_8511_0_1, dd_Smed_v6_8511_0_1, [Score=298, Expect=6e-92]} {RNA1509_59616} {RNA1310_7336} {RNA815_36982}
13. MligTC455_06648 83 1.73 Mlig455_010424

Neo: -

Age: -

0.956 - - - - - 0.956 Mlig455_010424 {REF} {Length: 1011}
14. MligTC455_47605 38 0.8 Mlig455_053106

Neo: -

Age: -

0.955 - - - - 0.955 - Mlig455_053106 {REF} {Length: 300} {NoTransDecoderORF} {RNA1509_54430} {RNA1310_76226.2} {RNA815_41194.1}
15. MligTC455_18252 40 0.83 Mlig455_019905

Neo: Irradiation

Age: -

Regeneration-upregulated R3: 6.503

Regeneration-enriched R3: 6.503

GLMN 0.954 - - 0.954 - - - Mlig455_019905 {REF} {Length: 2792} {TRANSSPLICED} {Pfam: Uncharacterised protein family, YAP/Alf4/glomulin [PF08568.12, score=65.4]} {Human: ENSG00000174842, GLMN, glomulin, FKBP associated protein, [RH, Score=98.6, Expect=6e-21]} {Mouse: ENSMUSG00000029276, Glmn, glomulin, FKBP associated protein, [RH, Score=108, Expect=2e-24]} {Dmel: FBgn0050496, CG30496, [RH, Score=66.6, Expect=3e-11]} {Smed: dd_Smed_v6_9392_0_1, dd_Smed_v6_9392_0_1, [Score=70.1, Expect=1e-12]} {RNA1509_27340} {RNA1310_12822.1} {RNA815_2989.1}
16. MligTC455_15087 28 0.59 Mlig455_036738

Neo: -

Age: -

0.952 - - - - - 0.952 Mlig455_036738 {REF} {Length: 821} {RNA1509_18025} {RNA1310_92583} {RNA815_44681}
17. MligTC455_34727 96 2 Mlig455_041259

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.811

Region-enriched R8: 4.340/0.01025

GLIPR1 0.951 - - - - - 0.951 Mlig455_041259 {REF} {Length: 5028} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=67.4]} {Human: ENSG00000139278, GLIPR1, GLI pathogenesis related 1, [RH, Score=98.6, Expect=2e-22]} {Mouse: ENSMUSG00000056888, Glipr1, GLI pathogenesis-related 1 (glioma), [RH, Score=107, Expect=7e-26]} {Dmel: FBgn0038126, CG8483, [Score=52.8, Expect=5e-07]} {Celegans: WBGene00003055, lon-1, LONg, [Score=67.0, Expect=6e-12]} {Smed: dd_Smed_v6_681_0_1, dd_Smed_v6_681_0_1, [Score=104, Expect=1e-25]} {RNA1509_36146} {RNA1310_23199} {RNA815_7031}
18. MligTC455_39821 45 0.94 Mlig455_020248

Neo: -

Age: -

DRGX 0.95 - - - - - 0.950 Mlig455_020248 {REF} {Length: 1773} {Pfam: Homeodomain [PF00046.31, score=83.1]} {Human: ENSG00000165606, DRGX, dorsal root ganglia homeobox, [RH, Score=132, Expect=4e-35]} {Mouse: ENSMUSG00000041730, Prrxl1, paired related homeobox protein-like 1, [RH, Score=133, Expect=1e-35]} {Dmel: FBgn0085369, Drgx, Dorsal root ganglia homeobox, [RH, Score=152, Expect=3e-40]} {Celegans: WBGene00000440, ceh-17, C. Elegans Homeobox; CEH-17, [Score=112, Expect=3e-28]} {Smed: dd_Smed_v6_63359_0_1, dd_Smed_v6_63359_0_1, [RH, Score=159, Expect=2e-47]} {RNA1310_82891}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA