M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_49251

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_49251 62 1.29 Mlig455_049389

Neo: -

Age: -

 FOLR2 Mlig455_049389 {REF} {Length: 1533} {TRANSSPLICED} {Pfam: Folate receptor family [PF03024.16, score=126.4]} {Human: ENSG00000165457, FOLR2, folate receptor beta, [RH, Score=126, Expect=2e-34]; ENSG00000110203, FOLR3, folate receptor 3, [RH, Score=124, Expect=1e-33]} {Mouse: ENSMUSG00000032725, Folr2, folate receptor 2 (fetal), [RH, Score=123, Expect=2e-33]; ENSMUSG00000001827, Folr1, folate receptor 1 (adult), [RH, Score=121, Expect=9e-33]} {Smed: dd_Smed_v6_8103_0_1, dd_Smed_v6_8103_0_1, [RH, Score=158, Expect=2e-47]} {RNA1509_23353} {RNA1310_17821, RNA1509_23353} {RNA1509_23353, RNA815_16281}

Cumulative graph for MligTC455_49251

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.309 1.424 0.99972 1.00000
RegionR2 3.355 1.424 0.03088 0.19920
RegionR3 -0.054 1.424 0.99974 1.00000
RegionR4 0.338 1.424 0.40194 0.72836
RegionR5 -0.248 1.424 0.99974 1.00000
RegionR6 1.663 1.424 0.20943 0.78668
RegionR7 -1.17 1.424 0.99974 1.00000
RegionR8 -1.575 1.424 0.99974 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.424 1.424 0.62593 1.00000
RegenerationR2 0.531 1.424 0.53056 0.88440
RegenerationR3 3.29 1.424 0.04356 0.36456
RegenerationR4 1.612 1.424 0.19246 0.63696
RegenerationR5 3.329 1.424 0.00887 0.17028
RegenerationR6 1.856 1.424 0.14532 0.46733
RegenerationBL 2.36 1.424 0.27385 0.63363
RegenerationTP 5.82 1.424 0.00773 0.14776


Genes with expression patterns similar to MligTC455_49251

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_49251 62 1.29 Mlig455_049389

Neo: -

Age: -

 FOLR2 4 - - 1.000 1.000 1.000 1.000 Mlig455_049389 {REF} {Length: 1533} {TRANSSPLICED} {Pfam: Folate receptor family [PF03024.16, score=126.4]} {Human: ENSG00000165457, FOLR2, folate receptor beta, [RH, Score=126, Expect=2e-34]; ENSG00000110203, FOLR3, folate receptor 3, [RH, Score=124, Expect=1e-33]} {Mouse: ENSMUSG00000032725, Folr2, folate receptor 2 (fetal), [RH, Score=123, Expect=2e-33]; ENSMUSG00000001827, Folr1, folate receptor 1 (adult), [RH, Score=121, Expect=9e-33]} {Smed: dd_Smed_v6_8103_0_1, dd_Smed_v6_8103_0_1, [RH, Score=158, Expect=2e-47]} {RNA1509_23353} {RNA1310_17821, RNA1509_23353} {RNA1509_23353, RNA815_16281}
2. MligTC455_36204 94 1.96 Mlig455_035702, Mlig455_050258, Mlig455_053594

Neo: -

Age: -

 RTL1 2.505 - - 0.788 - 0.971 0.746

Mlig455_035702 {REF} {Length: 1760} {Pfam: RNase H [PF00075.26, score=29.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=21.8]} {RNA1509_47233} {RNA1310_58380} {RNA815_3478.1}

Mlig455_050258 {REF} {Length: 1380} {Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=79.0, Expect=1e-18]} {RNA1509_41237} {RNA1310_70866} {RNA815_30267}

Mlig455_053594 {REF} {Length: 5265} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=93.8]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=88.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=84.6]; Integrase zinc binding domain [PF17921.3, score=69.8]; H2C2 zinc finger [PF09337.12, score=23.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=107, Expect=2e-23]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [RH, Score=104, Expect=8e-23]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [RH, Score=104, Expect=8e-23]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=241, Expect=1e-72]} {RNA1509_41237} {RNA1310_4795.1} {RNA815_37092}
3. MligTC455_49252 89 1.85 Mlig455_062278

Neo: -

Age: logFC(26M/2M)=0.298

 FOLR2 1.871 - - 0.971 - 0.900 - Mlig455_062278 {REF} {Length: 3000} {TRANSSPLICED} {Pfam: Folate receptor family [PF03024.16, score=126.0]} {Human: ENSG00000165457, FOLR2, folate receptor beta, [RH, Score=126, Expect=2e-34]; ENSG00000110203, FOLR3, folate receptor 3, [RH, Score=124, Expect=1e-33]} {Mouse: ENSMUSG00000032725, Folr2, folate receptor 2 (fetal), [RH, Score=124, Expect=1e-33]; ENSMUSG00000001827, Folr1, folate receptor 1 (adult), [RH, Score=120, Expect=2e-32]} {Smed: dd_Smed_v6_8103_0_1, dd_Smed_v6_8103_0_1, [RH, Score=155, Expect=3e-46]} {RNA1509_17845, RNA1509_23353, RNA1509_24248} {RNA1310_17821, RNA1509_17845, RNA1509_24248} {RNA1509_17845, RNA1509_24248, RNA815_16281}
4. MligTC455_22724 55 1.14 Mlig455_025091

Neo: -

Age: -

 1.746 - - 0.987 - - 0.759 Mlig455_025091 {REF} {Length: 2765} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=23.7]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_16253.1}
5. MligTC455_29814 22 0.46 Mlig455_055540, Mlig455_067319

Neo: -

Age: -

 1.723 - - 0.772 - 0.951 -

Mlig455_055540 {REF} {Length: 656} {NoTransDecoderORF} {RNA1509_58257} {RNA1310_20780.1} {RNA815_13375.1}

Mlig455_067319 {REF} {Length: 600} {NoTransDecoderORF} {RNA1509_58257} {RNA1310_20780.1} {RNA815_8071.1}
6. MligTC455_01696 27 0.56 Mlig455_015093

Neo: -

Age: -

 1.717 - - - - 0.976 0.741 Mlig455_015093 {REF} {Length: 629} {RNA1509_45595} {RNA1310_13430.1} {RNA815_343.1}
7. MligTC455_35262 49 1.01 Mlig455_068488

Neo: -

Age: Down-Up-Up

 1.675 - - 0.956 - 0.719 - Mlig455_068488 {REF} {Length: 1949} {RNA1509_49623} {RNA1310_37062, RNA1509_49623} {RNA1509_49623, RNA815_39890}
8. MligTC455_40308 21 0.44 Mlig455_047748

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_047748 {REF} {Length: 474} {NoTransDecoderORF}
9. MligTC455_04907 37 0.77 Mlig455_060418

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_060418 {REF} {Length: 1206} {RNA1310_39070} {RNA815_39939}
10. MligTC455_38433 28 0.57 Mlig455_018439

Neo: -

Age: Up-Down-Up

 GLS2 0.973 - - 0.973 - - - Mlig455_018439 {REF} {Length: 3949} {Pfam: Glutaminase [PF04960.17, score=314.8]; EF-hand domain [PF17959.3, score=59.1]; Ankyrin repeats (3 copies) [PF12796.9, score=26.4]; Ankyrin repeats (many copies) [PF13637.8, score=26.2]} {Human: ENSG00000135423, GLS2, glutaminase 2, [Score=473, Expect=3e-157]; ENSG00000115419, GLS, glutaminase, [Score=467, Expect=3e-154]} {Mouse: ENSMUSG00000044005, Gls2, glutaminase 2 (liver, mitochondrial), [Score=471, Expect=5e-157]; ENSMUSG00000026103, Gls, glutaminase, [Score=468, Expect=7e-155]} {Dmel: FBgn0261625, GLS, Glutaminase, [Score=474, Expect=5e-157]} {Celegans: WBGene00008435, glna-2, Putative glutaminase 2, [Score=457, Expect=2e-151]} {Smed: dd_Smed_v6_15097_0_1, dd_Smed_v6_15097_0_1, [Score=385, Expect=3e-126]} {RNA1509_48964} {RNA1310_56872}
11. MligTC455_49870 86 1.8 Mlig455_028362, Mlig455_067454, Mlig455_067455

Neo: -

Age: -

 CHRM1, CHRM4 0.973 - - - - 0.973 -

Mlig455_028362 {REF} {Length: 3223} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=40.4]} {Human: ENSG00000168539, CHRM1, cholinergic receptor muscarinic 1, [Score=98.2, Expect=2e-21]; ENSG00000180720, CHRM4, cholinergic receptor muscarinic 4, [Score=94.7, Expect=3e-20]} {Mouse: ENSMUSG00000032773, Chrm1, cholinergic receptor, muscarinic 1, CNS, [Score=97.4, Expect=2e-21]; ENSMUSG00000040495, Chrm4, cholinergic receptor, muscarinic 4, [Score=94.7, Expect=2e-20]} {Dmel: FBgn0037546, mAChR-B, muscarinic Acetylcholine Receptor, B-type, [Score=136, Expect=5e-34]} {Celegans: WBGene00001518, gar-2, Probable muscarinic acetylcholine receptor gar-2, [RH, Score=128, Expect=4e-33]} {Smed: dd_Smed_v6_37337_0_1, dd_Smed_v6_37337_0_1, [RH, Score=149, Expect=1e-42]} {RNA1310_12338} {RNA815_37088}

Mlig455_067454 {REF} {Length: 1188} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=103.9]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=29.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=27.2]} {Human: ENSG00000180720, CHRM4, cholinergic receptor muscarinic 4, [Score=102, Expect=2e-23]; ENSG00000168539, CHRM1, cholinergic receptor muscarinic 1, [Score=97.1, Expect=1e-21]} {Mouse: ENSMUSG00000040495, Chrm4, cholinergic receptor, muscarinic 4, [Score=103, Expect=6e-24]} {Dmel: FBgn0037546, mAChR-B, muscarinic Acetylcholine Receptor, B-type, [Score=189, Expect=1e-53]} {Celegans: WBGene00001518, gar-2, Probable muscarinic acetylcholine receptor gar-2, [Score=133, Expect=3e-34]} {Smed: dd_Smed_v6_24759_0_1, dd_Smed_v6_24759_0_1, [Score=225, Expect=7e-69]} {RNA1310_12338} {RNA815_52171}

Mlig455_067455 {REF} {Length: 2697} {RNA1310_12338} {RNA815_37088}
12. MligTC455_18252 40 0.83 Mlig455_019905

Neo: Irradiation

Age: -

Regeneration-upregulated R3: 6.503

Regeneration-enriched R3: 6.503

 GLMN 0.972 - - 0.972 - - - Mlig455_019905 {REF} {Length: 2792} {TRANSSPLICED} {Pfam: Uncharacterised protein family, YAP/Alf4/glomulin [PF08568.12, score=65.4]} {Human: ENSG00000174842, GLMN, glomulin, FKBP associated protein, [RH, Score=98.6, Expect=6e-21]} {Mouse: ENSMUSG00000029276, Glmn, glomulin, FKBP associated protein, [RH, Score=108, Expect=2e-24]} {Dmel: FBgn0050496, CG30496, [RH, Score=66.6, Expect=3e-11]} {Smed: dd_Smed_v6_9392_0_1, dd_Smed_v6_9392_0_1, [Score=70.1, Expect=1e-12]} {RNA1509_27340} {RNA1310_12822.1} {RNA815_2989.1}
13. MligTC455_38967 71 1.48 Mlig455_060741

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.569

Region-enriched R2: 3.815/0.00926
Region-enriched R7: 3.563/0.01797

 UTRN 0.971 - - 0.971 - - - Mlig455_060741 {REF} {Length: 4727} {Pfam: EF-hand [PF09069.13, score=127.4]; EF hand [PF09068.13, score=102.4]; Zinc finger, ZZ type [PF00569.19, score=37.7]; WW domain [PF00397.28, score=18.6]} {Human: ENSG00000152818, UTRN, utrophin, [RH, Score=493, Expect=5e-147]; ENSG00000198947, DMD, dystrophin, [RH, Score=489, Expect=1e-150]} {Mouse: ENSMUSG00000019820, Utrn, utrophin, [RH, Score=493, Expect=2e-156]; ENSMUSG00000045103, Dmd, dystrophin, muscular dystrophy, [RH, Score=487, Expect=3e-145]} {Dmel: FBgn0260003, Dys, Dystrophin, [RH, Score=516, Expect=4e-155]} {Celegans: WBGene00001131, dys-1, Dystrophin-1, [RH, Score=337, Expect=1e-95]} {Smed: dd_Smed_v6_5325_0_6, dd_Smed_v6_5325_0_6, [RH, Score=295, Expect=4e-82]} {RNA1509_38827} {RNA1310_24533} {RNA815_12379}
14. MligTC455_48192 17 0.36 Mlig455_020984

Neo: -

Age: Down-Down-Up

 DLG1 0.971 - - 0.971 - - - Mlig455_020984 {REF} {Length: 2812} {Pfam: Guanylate kinase [PF00625.23, score=174.6]; PDZ domain [PF00595.26, score=49.2]; Variant SH3 domain [PF07653.19, score=34.8]; SH3 domain [PF00018.30, score=30.1]; PDZ domain [PF17820.3, score=19.7]} {Human: ENSG00000075711, DLG1, discs large MAGUK scaffold protein 1, [Score=430, Expect=1e-137]; ENSG00000150672, DLG2, discs large MAGUK scaffold protein 2, [Score=426, Expect=4e-135]} {Mouse: ENSMUSG00000052572, Dlg2, discs large MAGUK scaffold protein 2, [RH, Score=426, Expect=1e-141]} {Dmel: FBgn0001624, dlg1, discs large 1, [RH, Score=437, Expect=4e-140]} {Celegans: WBGene00001006, dlg-1, Drosophila Discs LarGe homolog; MAGUK protein DLG-1; SAP97-like protein DLG-1, [Score=345, Expect=2e-105]} {Smed: dd_Smed_v6_8511_0_1, dd_Smed_v6_8511_0_1, [Score=298, Expect=6e-92]} {RNA1509_59616} {RNA1310_7336} {RNA815_36982}
15. MligTC455_39751 106 2.22 Mlig455_068358

Neo: -

Age: -

Region-enriched R5: 2.881/0.02724

 0.968 - - - - 0.968 - Mlig455_068358 {REF} {Length: 3597} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_2938.1} {RNA815_14343.2}
16. MligTC455_30893 107 2.23 Mlig455_066036

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_066036 {REF} {Length: 4220} {Pfam: HEPN domain [PF05168.16, score=30.8]} {RNA1509_8662} {RNA1310_4972} {RNA815_1384}
17. MligTC455_22389 83 1.72 Mlig455_026979

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_026979 {REF} {Length: 1624} {Pfam: PT repeat [PF04886.14, score=28.2]}
18. MligTC455_40591 172 3.59 Mlig455_030159

Neo: -

Age: -

 0.965 - - 0.965 - - - Mlig455_030159 {REF} {Length: 3255} {NoTransDecoderORF} {RNA1509_25825} {RNA1310_58828.3} {RNA815_37716}
19. MligTC455_00462 37 0.77 Mlig455_000458

Neo: -

Age: -

Regeneration-enriched TP: 8.699
Regeneration-enriched BL: 7.460
Regeneration-enriched R3: 7.157
Regeneration-enriched R4: 6.829
Regeneration-enriched R6: 6.381
Regeneration-enriched R5: 6.068

 0.964 - - - - 0.964 - Mlig455_000458 {REF} {Length: 572} {NoTransDecoderORF}
20. MligTC455_07578 52 1.09 Mlig455_063097

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_063097 {REF} {Length: 685} {NoTransDecoderORF} {RNA1310_96762}
21. MligTC455_21151 16 0.34 Mlig455_006792

Neo: -

Age: -

 PTF1A 0.964 - - - - 0.964 - Mlig455_006792 {REF} {Length: 1895} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=57.8]} {Human: ENSG00000168267, PTF1A, pancreas associated transcription factor 1a, [Score=64.7, Expect=2e-11]; ENSG00000146618, FERD3L, Fer3 like bHLH transcription factor, [Score=63.5, Expect=7e-12]} {Mouse: ENSMUSG00000026735, Ptf1a, pancreas specific transcription factor, 1a, [Score=64.3, Expect=1e-11]; ENSMUSG00000046518, Ferd3l, Fer3 like bHLH transcription factor, [Score=63.5, Expect=6e-12]} {Dmel: FBgn0037475, Fer1, 48 related 1, [Score=67.4, Expect=5e-13]} {Celegans: WBGene00003018, lin-32, [Score=55.8, Expect=1e-09]} {Smed: dd_Smed_v6_6869_0_1, dd_Smed_v6_6869_0_1, [RH, Score=73.2, Expect=9e-16]} {RNA1310_83730} {RNA815_43903}
22. MligTC455_39887 12 0.24 Mlig455_058162, Mlig455_058223

Neo: -

Age: -

 0.963 - - - - 0.963 -

Mlig455_058162 {REF} {Length: 1322} {NoTransDecoderORF} {RNA1509_34610} {RNA1310_120023} {RNA815_18736}

Mlig455_058223 {REF} {Length: 575} {NoTransDecoderORF} {RNA1310_120023}
23. MligTC455_26051 78 1.63 Mlig455_062437

Neo: -

Age: -

 ARRB1 0.962 - - 0.962 - - - Mlig455_062437 {REF} {Length: 6527} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=106.9]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=84.3]} {Human: ENSG00000137486, ARRB1, arrestin beta 1, [RH, Score=471, Expect=2e-163]; ENSG00000141480, ARRB2, arrestin beta 2, [RH, Score=464, Expect=1e-160]} {Mouse: ENSMUSG00000018909, Arrb1, arrestin, beta 1, [RH, Score=469, Expect=2e-162]; ENSMUSG00000060216, Arrb2, arrestin, beta 2, [RH, Score=466, Expect=3e-161]} {Dmel: FBgn0040206, krz, kurtz, [RH, Score=473, Expect=3e-163]} {Celegans: WBGene00000195, arr-1, Probable beta-arrestin, [RH, Score=473, Expect=3e-164]} {Smed: dd_Smed_v6_5512_0_2, dd_Smed_v6_5512_0_2, [RH, Score=587, Expect=0.0]} {RNA1509_33667, RNA1509_9005} {RNA1310_9541, RNA1509_33667} {RNA1509_33667, RNA815_3201}
24. MligTC455_07900 18 0.37 Mlig455_032483

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_032483 {REF} {Length: 605} {NoTransDecoderORF}
25. MligTC455_12336 20 0.41 Mlig455_021296

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_021296 {REF} {Length: 479} {NoTransDecoderORF}
26. MligTC455_20244 224 4.67 Mlig455_006227, Mlig455_006289

Neo: -

Age: Down-Down-Up

 PRR9 0.959 - - - - 0.959 -

Mlig455_006227 {REF} {Length: 528} {NoTransDecoderORF} {RNA1509_36220} {RNA1310_70757.1} {RNA815_57106}

Mlig455_006289 {REF} {Length: 2388} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=1e-05]} {RNA1509_13, RNA1509_34, RNA1509_36220} {RNA1310_70757.1, RNA1509_13, RNA1509_34} {RNA1509_13, RNA1509_34, RNA815_57106}
27. MligTC455_43912 108 2.26 Mlig455_038979

Neo: -

Age: -

Region-enriched R8: 3.794/0.00970

 SNAI2 0.959 - - 0.959 - - - Mlig455_038979 {REF} {Length: 2442} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=89.3]; C2H2-type zinc finger [PF13894.8, score=57.9]; Zinc-finger double domain [PF13465.8, score=53.2]; Zinc-finger of C2H2 type [PF12874.9, score=40.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=40.0]; C2H2-type zinc finger [PF13912.8, score=35.8]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=24.6]; Zinc ribbon domain [PF09723.12, score=19.4]} {Human: ENSG00000019549, SNAI2, snail family transcriptional repressor 2, [RH, Score=204, Expect=3e-62]} {Mouse: ENSMUSG00000022676, Snai2, snail family zinc finger 2, [RH, Score=202, Expect=6e-62]} {Dmel: FBgn0001983, wor, worniu, [RH, Score=207, Expect=7e-61]} {Celegans: WBGene00019299, snai-1, SNAIl family zinc finger 2 transcription factor homolog, [Score=152, Expect=9e-44]} {Smed: dd_Smed_v6_10216_0_1, dd_Smed_v6_10216_0_1, [RH, Score=204, Expect=3e-62]} {RNA1509_43471} {RNA1310_64158} {RNA815_60731}
28. MligTC455_19701 63 1.32 Mlig455_039776

Neo: -

Age: -

Region-enriched R4: 4.356/0.04826

 0.956 - - 0.956 - - - Mlig455_039776 {REF} {Length: 884} {NoTransDecoderORF} {RNA1310_39282} {RNA815_40382}
29. MligTC455_21120 35 0.72 Mlig455_061424, Mlig455_067556

Neo: -

Age: -

 0.956 - - - - 0.956 -

Mlig455_061424 {REF} {Length: 606} {RNA1310_49510} {RNA815_20678}

Mlig455_067556 {REF} {Length: 619} {RNA1310_49510} {RNA815_20678}
30. MligTC455_17477 47 0.98 Mlig455_053346

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_053346 {REF} {Length: 2041} {RNA1509_20382} {RNA1310_59327} {RNA815_58492}
31. MligTC455_10143 16 0.33 Mlig455_027554

Neo: -

Age: -

 FLNA 0.954 - - - - 0.954 - Mlig455_027554 {REF} {Length: 2762} {Pfam: Calponin homology (CH) domain [PF00307.33, score=48.0]; Filamin/ABP280 repeat [PF00630.21, score=32.0]} {Human: ENSG00000196924, FLNA, filamin A, [Score=55.5, Expect=4e-07]} {Celegans: WBGene00020530, T15B12.1, [Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_12996_0_1, dd_Smed_v6_12996_0_1, [Score=48.9, Expect=1e-05]} {RNA1310_59993} {RNA815_50539}
32. MligTC455_43814 14 0.28 Mlig455_061376

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_061376 {REF} {Length: 1105} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=29.2]} {RNA1509_17916} {RNA1310_11712} {RNA815_9244}
33. MligTC455_49936 134 2.79 Mlig455_025477, Mlig455_033596

Neo: -

Age: Down-Up-Down

Region-enriched R3: 2.907/0.03091

 0.954 - - - - 0.954 -

Mlig455_025477 {REF} {Length: 934} {RNA1310_65296} {RNA815_34444}

Mlig455_033596 {REF} {Length: 936} {RNA1310_65296} {RNA815_34444}
34. MligTC455_11410 24 0.5 Mlig455_070874

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_070874 {REF} {Length: 2487} {RNA1310_71185}
35. MligTC455_29474 48 1 Mlig455_037282

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_037282 {REF} {Length: 586} {NoTransDecoderORF} {RNA1509_43957} {RNA1310_26620} {RNA815_37878}
36. MligTC455_06950 97 2.01 Mlig455_043251

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_043251 {REF} {Length: 515} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_54046} {RNA1310_39383.1} {RNA815_20329.1}
37. MligTC455_42140 434 9.05 Mlig455_039068

Neo: -

Age: -

 CCDC12 0.952 - - - - 0.952 - Mlig455_039068 {REF} {Length: 2152} {TRANSSPLICED} {Pfam: cwf18 pre-mRNA splicing factor [PF08315.14, score=100.2]} {Human: ENSG00000160799, CCDC12, coiled-coil domain containing 12, [RH, Score=97.8, Expect=2e-25]} {Mouse: ENSMUSG00000019659, Ccdc12, coiled-coil domain containing 12, [RH, Score=99.0, Expect=3e-26]} {Dmel: FBgn0039732, CG15525, [RH, Score=100, Expect=9e-27]} {Celegans: WBGene00022092, Y69A2AR.21, [RH, Score=58.5, Expect=6e-11]} {RNA1509_39598} {RNA1310_35228} {RNA815_13463.1}
38. MligTC455_08764 137 2.86 Mlig455_031176

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_031176 {REF} {Length: 746} {NoTransDecoderORF}
39. MligTC455_49483 622 12.95 Mlig455_070527

Neo: -

Age: -

Region-specific R7: 3.606
Region-specific R8: 3.396

Region-enriched R7: 3.501/0.00000
Region-enriched R8: 3.198/0.00000

Regeneration-downregulated BL: -3.633

Regeneration-depleted BL: -3.633

 0.95 - - - - 0.950 - Mlig455_070527 {REF} {Length: 693} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [Score=65.1, Expect=8e-15]} {RNA1509_30340} {RNA1310_59879, RNA1509_30340} {RNA1509_30340, RNA815_30690}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA