M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_22757

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22757 125 2.61 Mlig455_002660

Neo: -

Age: -

 Mlig455_002660 {REF} {Length: 4866} {TRANSSPLICED} {RNA1509_20135} {RNA1310_8897.1} {RNA815_3545}

Cumulative graph for MligTC455_22757

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.676 1.851 0.26749 0.91747
RegionR2 0.113 1.851 0.89665 1.00000
RegionR3 0.298 1.851 0.59336 1.00000
RegionR4 -0.515 1.851 0.51421 0.84000
RegionR5 -0.348 1.851 0.52438 0.88721
RegionR6 -0.443 1.851 0.50624 1.00000
RegionR7 -0.598 1.851 0.50848 1.00000
RegionR8 -0.182 1.851 0.85126 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.901 1.851 0.22611 0.95692
RegenerationR2 -0.784 1.851 0.31380 0.75340
RegenerationR3 -0.225 1.851 0.76303 0.96859
RegenerationR4 -0.076 1.851 0.91343 1.00000
RegenerationR5 0.947 1.851 0.12265 0.52383
RegenerationR6 0.544 1.851 0.52997 0.82678
RegenerationBL -0.021 1.851 0.98430 1.00000
RegenerationTP -1.293 1.851 0.37278 0.81006


Genes with expression patterns similar to MligTC455_22757

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22757 125 2.61 Mlig455_002660

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_002660 {REF} {Length: 4866} {TRANSSPLICED} {RNA1509_20135} {RNA1310_8897.1} {RNA815_3545}
2. MligTC455_21052 277 5.78 Mlig455_057141

Neo: -

Age: -

 KRAS 2.429 - 0.762 0.951 - 0.716 - Mlig455_057141 {REF} {Length: 4831} {Pfam: Ras family [PF00071.24, score=191.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=74.6]; ADP-ribosylation factor family [PF00025.23, score=40.0]; RsgA GTPase [PF03193.18, score=27.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=26.8]; 50S ribosome-binding GTPase [PF01926.25, score=26.3]} {Human: ENSG00000133703, KRAS, KRAS proto-oncogene, GTPase, [RH, Score=279, Expect=1e-96]; ENSG00000174775, HRAS, HRas proto-oncogene, GTPase, [RH, Score=276, Expect=1e-95]; ENSG00000276536, HRAS, HRas proto-oncogene, GTPase, [RH, Score=276, Expect=1e-95]; ENSG00000213281, NRAS, NRAS proto-oncogene, GTPase, [RH, Score=271, Expect=1e-93]} {Mouse: ENSMUSG00000030265, Kras, Kirsten rat sarcoma viral oncogene homolog, [RH, Score=283, Expect=2e-98]; ENSMUSG00000025499, Hras, Harvey rat sarcoma virus oncogene, [RH, Score=276, Expect=9e-96]; ENSMUSG00000027852, Nras, neuroblastoma ras oncogene, [RH, Score=273, Expect=3e-94]} {Dmel: FBgn0003205, Ras85D, Ras oncogene at 85D, [RH, Score=273, Expect=1e-94]} {Celegans: WBGene00002335, let-60, Ras protein let-60, [RH, Score=264, Expect=5e-91]} {Smed: dd_Smed_v6_2885_0_1, dd_Smed_v6_2885_0_1, [RH, Score=260, Expect=1e-89]} {RNA1509_38188, RNA1509_40550} {RNA1310_45604, RNA1509_40550} {RNA1509_40550, RNA815_23702}
3. MligTC455_43211 366 7.63 Mlig455_007539, Mlig455_024793

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.476

Region-enriched R8: 3.401/0.00304

 ZNF16 1.828 - - - - 0.878 0.950

Mlig455_007539 {REF} {Length: 1727} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=52.5]; Zinc finger, C2H2 type [PF00096.28, score=48.2]; Zinc-finger of C2H2 type [PF12874.9, score=35.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=33.0]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=24.0]; Zinc-fingers and homeoboxes C2H2 finger domain [PF18387.3, score=20.6]} {Human: ENSG00000170631, ZNF16, zinc finger protein 16, [Score=85.1, Expect=4e-17]; ENSG00000213973, ZNF99, zinc finger protein 99, [Score=81.6, Expect=6e-16]; ENSG00000178175, ZNF366, zinc finger protein 366, [Score=81.3, Expect=8e-16]; ENSG00000204859, ZBTB48, zinc finger and BTB domain containing 48, [Score=81.3, Expect=7e-16]; ENSG00000180787, ZFP3, ZFP3 zinc finger protein, [Score=80.9, Expect=7e-16]; ENSG00000196350, ZNF729, zinc finger protein 729, [Score=80.9, Expect=1e-15]} {Mouse: ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=84.0, Expect=4e-17]; ENSMUSG00000050919, Zfp366, zinc finger protein 366, [Score=81.3, Expect=4e-16]; ENSMUSG00000028952, Zbtb48, zinc finger and BTB domain containing 48, [Score=80.5, Expect=8e-16]} {Dmel: FBgn0038550, CG17801, [Score=67.4, Expect=6e-12]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=53.9, Expect=9e-08]} {Smed: dd_Smed_v6_11840_0_1, dd_Smed_v6_11840_0_1, [Score=60.5, Expect=6e-10]} {RNA1509_14767} {RNA1310_5349} {RNA815_28876}

Mlig455_024793 {REF} {Length: 1727} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=52.5]; Zinc finger, C2H2 type [PF00096.28, score=48.2]; Zinc-finger of C2H2 type [PF12874.9, score=35.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=33.0]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=24.0]; Zinc-fingers and homeoboxes C2H2 finger domain [PF18387.3, score=20.6]} {Human: ENSG00000170631, ZNF16, zinc finger protein 16, [Score=85.1, Expect=4e-17]; ENSG00000213973, ZNF99, zinc finger protein 99, [Score=81.6, Expect=6e-16]; ENSG00000178175, ZNF366, zinc finger protein 366, [Score=81.3, Expect=8e-16]; ENSG00000204859, ZBTB48, zinc finger and BTB domain containing 48, [Score=81.3, Expect=7e-16]; ENSG00000180787, ZFP3, ZFP3 zinc finger protein, [Score=80.9, Expect=7e-16]; ENSG00000196350, ZNF729, zinc finger protein 729, [Score=80.9, Expect=1e-15]} {Mouse: ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=84.0, Expect=4e-17]; ENSMUSG00000050919, Zfp366, zinc finger protein 366, [Score=81.3, Expect=4e-16]; ENSMUSG00000028952, Zbtb48, zinc finger and BTB domain containing 48, [Score=80.5, Expect=8e-16]} {Dmel: FBgn0038550, CG17801, [Score=67.4, Expect=6e-12]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=53.9, Expect=9e-08]} {Smed: dd_Smed_v6_11840_0_1, dd_Smed_v6_11840_0_1, [Score=60.5, Expect=6e-10]} {RNA1509_14767} {RNA1310_5349, RNA1509_14767} {RNA1509_14767, RNA815_28876}
4. MligTC455_35590 154 3.2 Mlig455_048408

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 1.700/0.02240

 1.794 - - - 0.969 - 0.825 Mlig455_048408 {REF} {Length: 4279} {TRANSSPLICED} {RNA1509_19998} {RNA1310_6168} {RNA815_25757}
5. MligTC455_37909 128 2.68 Mlig455_054841

Neo: Int S/G2/M

Age: Up-Down-Up, logFC(26M/2M)=0.379

 RAD54B 1.695 - - 0.971 - 0.724 - Mlig455_054841 {REF} {Length: 5846} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=166.8]; Beta-ketoacyl synthase, N-terminal domain [PF00109.28, score=156.0]; Beta-ketoacyl synthase, C-terminal domain [PF02801.24, score=75.6]; Helicase conserved C-terminal domain [PF00271.33, score=45.4]; Type III restriction enzyme, res subunit [PF04851.17, score=36.0]} {Human: ENSG00000197275, RAD54B, RAD54 homolog B, [RH, Score=481, Expect=2e-150]; ENSG00000265817, FSBP, fibrinogen silencer binding protein, [RH, Score=457, Expect=9e-144]} {Mouse: ENSMUSG00000078773, Rad54b, RAD54 homolog B (S. cerevisiae), [RH, Score=478, Expect=1e-149]} {Dmel: FBgn0002989, okr, okra, [Score=358, Expect=4e-107]} {Celegans: WBGene00013792, Y116A8C.13, [RH, Score=373, Expect=5e-112]} {Smed: dd_Smed_v6_9943_0_1, dd_Smed_v6_9943_0_1, [RH, Score=451, Expect=2e-140]} {RNA1509_28654, RNA1509_51546} {RNA1310_14206, RNA1509_51546} {RNA1509_51546, RNA815_23602}
6. MligTC455_33421 15 0.3 Mlig455_039711

Neo: -

Age: -

 0.989 - - 0.989 - - - Mlig455_039711 {REF} {Length: 1559} {RNA1509_47895} {RNA1310_42391} {RNA815_49074}
7. MligTC455_44189 30 0.63 Mlig455_020227

Neo: -

Age: -

 APLNR 0.986 - - 0.986 - - - Mlig455_020227 {REF} {Length: 2245} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=51.2]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=35.9]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=21.0]} {Human: ENSG00000134817, APLNR, apelin receptor, [Score=54.3, Expect=2e-07]} {Mouse: ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=54.7, Expect=1e-07]} {Dmel: FBgn0035385, FMRFaR, FMRFamide Receptor, [Score=94.0, Expect=4e-20]} {Celegans: WBGene00020586, frpr-18, FLP-2 receptor; FMRFamide Peptide Receptor family, [Score=87.0, Expect=4e-18]} {Smed: dd_Smed_v6_31203_0_1, dd_Smed_v6_31203_0_1, [Score=167, Expect=2e-46]} {RNA1310_43286} {RNA815_36082}
8. MligTC455_52024 78 1.63 Mlig455_054207

Neo: -

Age: -

Region-enriched R2: 4.262/0.04287

 UNG 0.972 - - - - - 0.972 Mlig455_054207 {REF} {Length: 2244} {Pfam: Uracil DNA glycosylase superfamily [PF03167.21, score=63.6]} {Human: ENSG00000076248, UNG, uracil DNA glycosylase, [Score=163, Expect=4e-48]} {Mouse: ENSMUSG00000029591, Ung, uracil DNA glycosylase, [Score=167, Expect=4e-50]} {Celegans: WBGene00013241, ung-1, Uracil-DNA glycosylase, [Score=189, Expect=4e-59]} {Smed: dd_Smed_v6_1568_0_1, dd_Smed_v6_1568_0_1, [Score=172, Expect=5e-53]} {RNA1509_58564} {RNA1310_30006.2} {RNA815_15086}
9. MligTC455_12845 13 0.26 Mlig455_064664

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_064664 {REF} {Length: 133} {NoTransDecoderORF} {RNA1310_24929}
10. MligTC455_16410 313 6.52 Mlig455_053945

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_053945 {REF} {Length: 550} {NoTransDecoderORF} {RNA1509_49687, RNA1509_58070} {RNA1310_67924, RNA1509_58070} {RNA1509_58070, RNA815_48743}
11. MligTC455_52746 33 0.7 Mlig455_036774

Neo: -

Age: -

 0.968 - - 0.968 - - - Mlig455_036774 {REF} {Length: 1992} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=90.0]} {Smed: dd_Smed_v6_16274_0_1, dd_Smed_v6_16274_0_1, [Score=77.4, Expect=7e-15]} {RNA1310_26715} {RNA815_32348}
12. MligTC455_43185 34 0.71 Mlig455_043466

Neo: -

Age: -

 0.966 - - 0.966 - - - Mlig455_043466 {REF} {Length: 1946} {Pfam: Fez1 [PF06818.17, score=22.6]; HOOK protein coiled-coil region [PF05622.14, score=17.8]} {RNA1310_47153} {RNA815_22265}
13. MligTC455_47497 103 2.15 Mlig455_055557

Neo: -

Age: Down-Up-Down

Regeneration-upregulated BL: 4.901

Regeneration-enriched BL: 4.901

 0.965 - - - - - 0.965 Mlig455_055557 {REF} {Length: 834} {NoTransDecoderORF} {RNA1509_24901} {RNA1310_65244} {RNA815_52866}
14. MligTC455_50780 17 0.36 Mlig455_012319, Mlig455_052420

Neo: -

Age: Down-Up-Down

 ARNTL 0.962 - - 0.962 - - -

Mlig455_012319 {REF} {Length: 3627} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=48.6]; PAS fold [PF08447.14, score=30.4]; PAS domain [PF14598.8, score=28.2]; PAS fold [PF00989.27, score=19.4]} {Human: ENSG00000133794, ARNTL, aryl hydrocarbon receptor nuclear translocator like, [Score=183, Expect=2e-49]} {Mouse: ENSMUSG00000055116, Arntl, aryl hydrocarbon receptor nuclear translocator-like, [Score=181, Expect=1e-48]} {Dmel: FBgn0023094, cyc, cycle, [Score=150, Expect=3e-39]} {Celegans: WBGene00000095, aha-1, Aryl hydrocarbon receptor nuclear translocator homolog, [Score=129, Expect=6e-32]} {Smed: dd_Smed_v6_9171_0_1, dd_Smed_v6_9171_0_1, [Score=98.2, Expect=3e-21]} {RNA1509_18354} {RNA1310_6289, RNA1509_18354} {RNA1509_18354, RNA815_11264}

Mlig455_052420 {REF} {Length: 3674} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=48.5]; PAS fold [PF08447.14, score=30.0]; PAS domain [PF14598.8, score=28.1]; PAS fold [PF00989.27, score=20.0]} {Human: ENSG00000133794, ARNTL, aryl hydrocarbon receptor nuclear translocator like, [Score=176, Expect=2e-46]} {Mouse: ENSMUSG00000055116, Arntl, aryl hydrocarbon receptor nuclear translocator-like, [Score=176, Expect=2e-46]} {Dmel: FBgn0023094, cyc, cycle, [Score=138, Expect=6e-35]} {Celegans: WBGene00000095, aha-1, Aryl hydrocarbon receptor nuclear translocator homolog, [Score=116, Expect=2e-27]} {Smed: dd_Smed_v6_9171_0_1, dd_Smed_v6_9171_0_1, [Score=85.1, Expect=5e-17]} {RNA1509_18354, RNA1509_50087} {RNA1310_6289, RNA1509_50087} {RNA1509_50087, RNA815_11264}
15. MligTC455_13284 185 3.86 Mlig455_021567

Neo: -

Age: -

 TAF5L 0.961 - - - 0.961 - - Mlig455_021567 {REF} {Length: 5591} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=74.7]; WD domain, G-beta repeat [PF00400.34, score=74.6]; C2H2-type zinc finger [PF13894.8, score=57.6]; Zinc-finger double domain [PF13465.8, score=56.1]; Zinc-finger of C2H2 type [PF12874.9, score=31.9]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=31.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=25.3]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=22.3]; Zinc ribbon domain [PF09723.12, score=21.2]} {Human: ENSG00000135801, TAF5L, TATA-box binding protein associated factor 5 like, [Score=131, Expect=7e-31]; ENSG00000148835, TAF5, TATA-box binding protein associated factor 5, [Score=129, Expect=9e-30]} {Mouse: ENSMUSG00000038697, Taf5l, TATA-box binding protein associated factor 5 like, [Score=130, Expect=1e-30]; ENSMUSG00000025049, Taf5, TATA-box binding protein associated factor 5, [Score=129, Expect=6e-30]} {Dmel: FBgn0010356, Taf5, TBP-associated factor 5, [Score=108, Expect=7e-24]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=94.4, Expect=2e-21]} {Smed: dd_Smed_v6_26394_0_1, dd_Smed_v6_26394_0_1, [Score=99.0, Expect=6e-23]} {RNA1509_13332} {RNA1310_4578, RNA1509_13332} {RNA1509_13332, RNA815_8751}
16. MligTC455_18094 181 3.78 Mlig455_042157

Neo: Int S/G2/M

Age: Down-Down-Down

Region-enriched R5: 2.086/0.01667

 0.961 - - - - - 0.961 Mlig455_042157 {REF} {Length: 1425} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=38.8]} {Dmel: FBgn0043002, Chrac-14, Chromatin accessibility complex 14kD protein, [RH, Score=55.8, Expect=9e-10]} {RNA1509_35988} {RNA1310_23246} {RNA815_18085}
17. MligTC455_14039 24 0.5 Mlig455_045412

Neo: -

Age: -

 ANGPTL3 0.96 - - 0.960 - - - Mlig455_045412 {REF} {Length: 1491} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=55.0]} {Human: ENSG00000132855, ANGPTL3, angiopoietin like 3, [Score=48.9, Expect=1e-05]} {Dmel: FBgn0031804, CG9500, [Score=63.9, Expect=3e-11]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=58.2, Expect=4e-09]} {RNA1509_53291} {RNA1310_91324} {RNA815_10579.1}
18. MligTC455_50877 133 2.76 Mlig455_023008

Neo: -

Age: -

Regeneration-upregulated BL: 5.778

Regeneration-enriched BL: 5.778

 0.96 - - - - - 0.960 Mlig455_023008 {REF} {Length: 819} {TRANSSPLICED} {RNA1310_74407} {RNA815_32847.1}
19. MligTC455_22918 48 0.99 Mlig455_024197

Neo: -

Age: -

 0.959 - - 0.959 - - - Mlig455_024197 {REF} {Length: 882} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_24504} {RNA1310_56956} {RNA815_52770}
20. MligTC455_41564 151 3.14 Mlig455_005861

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_005861 {REF} {Length: 1908} {TRANSSPLICED} {Pfam: PUB domain [PF09409.12, score=24.4]} {RNA1509_35672, RNA1509_57679} {RNA1310_29072.1, RNA1509_35672, RNA1509_57679} {RNA1509_35672, RNA1509_57679, RNA815_18049}
21. MligTC455_19819 67 1.39 Mlig455_042327, Mlig455_047107

Neo: -

Age: -

 0.958 - - 0.958 - - -

Mlig455_042327 {REF} {Length: 1414} {RNA1310_83687}

Mlig455_047107 {REF} {Length: 1283} {RNA1310_83687}
22. MligTC455_24921 169 3.53 Mlig455_055130, Mlig455_064022, Mlig455_068594

Neo: -

Age: -

 0.958 - - 0.958 - - -

Mlig455_055130 {REF} {Length: 5554} {Mouse: ENSMUSG00000079051, Gm14025, predicted gene 14025, [Score=58.9, Expect=6e-08]} {RNA1509_36794, RNA1509_45848} {RNA1310_3132.1, RNA1509_45848} {RNA1509_45848, RNA815_9224}

Mlig455_064022 {REF} {Length: 5554} {Mouse: ENSMUSG00000079051, Gm14025, predicted gene 14025, [Score=58.5, Expect=7e-08]} {RNA1509_36794} {RNA1310_3132.1} {RNA815_9224}

Mlig455_068594 {REF} {Length: 4836} {Pfam: Vinculin family [PF01044.21, score=20.7]} {RNA1509_36794} {RNA1310_3132.1} {RNA815_9224}
23. MligTC455_13202 175 3.65 Mlig455_066195, Mlig455_068828

Neo: -

Age: Down-Down-Up

 MYO19 0.957 - - - - - 0.957

Mlig455_066195 {REF} {Length: 3624} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=293.0]} {Human: ENSG00000278372, MYO19, myosin XIX, [Score=248, Expect=9e-69]; ENSG00000278259, MYO19, myosin XIX, [Score=248, Expect=9e-69]} {Mouse: ENSMUSG00000020527, Myo19, myosin XIX, [Score=241, Expect=2e-66]} {Dmel: FBgn0000317, ck, crinkled, [Score=221, Expect=3e-59]} {Celegans: WBGene00002035, hum-1, Heavy chain, Unconventional Myosin, [Score=211, Expect=3e-56]} {Smed: dd_Smed_v6_5823_0_1, dd_Smed_v6_5823_0_1, [Score=211, Expect=3e-56]} {RNA1509_37477} {RNA1310_5400.2} {RNA815_4327}

Mlig455_068828 {REF} {Length: 3375} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=322.9]} {Human: ENSG00000278259, MYO19, myosin XIX, [Score=263, Expect=8e-74]; ENSG00000278372, MYO19, myosin XIX, [Score=263, Expect=8e-74]} {Mouse: ENSMUSG00000020527, Myo19, myosin XIX, [Score=255, Expect=3e-71]} {Dmel: FBgn0000317, ck, crinkled, [Score=236, Expect=7e-64]} {Celegans: WBGene00009730, myo-6, MYOsin heavy chain structural genes, [Score=228, Expect=1e-61]} {Smed: dd_Smed_v6_5823_0_1, dd_Smed_v6_5823_0_1, [Score=226, Expect=9e-61]} {RNA1509_37477} {RNA1310_5400.2} {RNA815_4327}
24. MligTC455_37460 252 5.25 Mlig455_054249

Neo: Int S/G2/M

Age: logFC(26M/2M)=1.015

 MFSD3 0.957 - 0.957 - - - - Mlig455_054249 {REF} {Length: 2521} {TRANSSPLICED} {Human: ENSG00000167700, MFSD3, major facilitator superfamily domain containing 3, [Score=105, Expect=6e-25]} {Mouse: ENSMUSG00000019080, Mfsd3, major facilitator superfamily domain containing 3, [Score=107, Expect=6e-26]} {Smed: dd_Smed_v6_18318_0_1, dd_Smed_v6_18318_0_1, [Score=171, Expect=5e-50]} {RNA1509_41389} {RNA1310_7558} {RNA815_29269}
25. MligTC455_50582 22 0.46 Mlig455_015496

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_015496 {REF} {Length: 675} {RNA1509_48973} {RNA1310_27704} {RNA815_36286}
26. MligTC455_21801 58 1.22 Mlig455_015442, Mlig455_032138

Neo: -

Age: -

 NPY1R 0.955 - - 0.955 - - -

Mlig455_015442 {REF} {Length: 2461} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=130.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=26.2]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=18.9]} {Human: ENSG00000164128, NPY1R, neuropeptide Y receptor Y1, [Score=128, Expect=5e-32]} {Mouse: ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=122, Expect=2e-30]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=140, Expect=4e-36]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=120, Expect=1e-29]} {Smed: dd_Smed_v6_25204_0_1, dd_Smed_v6_25204_0_1, [Score=208, Expect=2e-61]} {RNA1310_49156} {RNA815_43783}

Mlig455_032138 {REF} {Length: 2633} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=129.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=18.6]} {Human: ENSG00000164128, NPY1R, neuropeptide Y receptor Y1, [Score=126, Expect=2e-31]} {Mouse: ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=122, Expect=4e-30]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=136, Expect=1e-34]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=119, Expect=3e-29]} {Smed: dd_Smed_v6_25934_0_1, dd_Smed_v6_25934_0_1, [Score=207, Expect=5e-61]} {RNA1310_49156} {RNA815_43783}
27. MligTC455_46650 24 0.5 Mlig455_048649

Neo: -

Age: Down-Down-Up

 SLC46A2 0.955 - - 0.955 - - - Mlig455_048649 {REF} {Length: 2792} {Pfam: Major Facilitator Superfamily [PF07690.18, score=85.9]; PUCC protein [PF03209.17, score=18.4]} {Human: ENSG00000119457, SLC46A2, solute carrier family 46 member 2, [Score=71.6, Expect=1e-12]} {Mouse: ENSMUSG00000029650, Slc46a3, solute carrier family 46, member 3, [Score=75.9, Expect=3e-14]} {Dmel: FBgn0030576, CG15890, [RH, Score=102, Expect=1e-22]} {Celegans: WBGene00016705, C46C11.2, [RH, Score=96.3, Expect=7e-21]} {Smed: dd_Smed_v6_10822_0_1, dd_Smed_v6_10822_0_1, [Score=342, Expect=8e-112]} {RNA1509_40290} {RNA1310_13436} {RNA815_15082}
28. MligTC455_46890 74 1.55 Mlig455_025123, Mlig455_066047

Neo: -

Age: -

 0.955 - - 0.955 - - -

Mlig455_025123 {REF} {Length: 676} {RNA1310_77878} {RNA815_42887}

Mlig455_066047 {REF} {Length: 677} {RNA1310_77878} {RNA815_42887}
29. MligTC455_51670 423 8.81 Mlig455_054981

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 1.650/0.04341

 0.955 - - - - - 0.955 Mlig455_054981 {REF} {Length: 2869} {TRANSSPLICED} {Pfam: PEST, proteolytic signal-containing nuclear protein family [PF15473.8, score=59.2]} {RNA1509_55181, RNA1509_7874} {RNA1310_7292.1, RNA1509_55181} {RNA1509_55181, RNA815_7029.1}
30. MligTC455_11674 239 4.98 Mlig455_063568

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_063568 {REF} {Length: 3222} {TRANSSPLICED} {Pfam: F-box domain [PF00646.35, score=28.5]; F-box-like [PF12937.9, score=25.7]} {RNA1509_13155} {RNA1310_3624} {RNA815_4072}
31. MligTC455_12688 18 0.36 Mlig455_066704

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_066704 {REF} {Length: 581} {NoTransDecoderORF} {RNA1509_59020} {RNA1310_85238} {RNA815_31032.2}
32. MligTC455_12997 42 0.88 Mlig455_064114

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_064114 {REF} {Length: 2287} {RNA1509_38652} {RNA1310_6256} {RNA815_46748.1}
33. MligTC455_17039 24 0.5 Mlig455_025016

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_025016 {REF} {Length: 2009} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=72.7]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.5]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=18.8]} {Smed: dd_Smed_v6_14726_0_1, dd_Smed_v6_14726_0_1, [RH, Score=209, Expect=1e-63]} {RNA1310_42205} {RNA815_15017}
34. MligTC455_10196 48 1 Mlig455_035825

Neo: -

Age: logFC(26M/2M)=-0.579

 SOX7 0.953 - - 0.953 - - - Mlig455_035825 {REF} {Length: 1154} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=74.3]; HMG-box domain [PF09011.12, score=30.4]; Pleckstrin homology domain [PF15404.8, score=20.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.5]} {Human: ENSG00000285438, SOX7, SRY-box 7, [Score=116, Expect=8e-30]; ENSG00000171056, SOX7, SRY-box 7, [Score=116, Expect=8e-30]; ENSG00000203883, SOX18, SRY-box 18, [Score=115, Expect=3e-29]; ENSG00000125398, SOX9, SRY-box 9, [Score=113, Expect=5e-28]; ENSG00000164736, SOX17, SRY-box 17, [Score=113, Expect=2e-28]} {Mouse: ENSMUSG00000025902, Sox17, SRY (sex determining region Y)-box 17, [RH, Score=123, Expect=2e-34]} {Dmel: FBgn0005613, Sox15, Sox box protein 15, [Score=116, Expect=4e-29]} {Celegans: WBGene00004950, sox-3, SOX (Mammalian SRY box) family, [Score=107, Expect=5e-28]} {Smed: dd_Smed_v6_36521_0_1, dd_Smed_v6_36521_0_1, [Score=105, Expect=1e-26]} {RNA1310_54737.1} {RNA815_42176}
35. MligTC455_17572 30 0.62 Mlig455_055255, Mlig455_055301

Neo: -

Age: logFC(26M/2M)=3.022

 0.953 - - 0.953 - - -

Mlig455_055255 {REF} {Length: 725} {RNA1310_50531} {RNA815_29422}

Mlig455_055301 {REF} {Length: 738} {RNA1310_50531} {RNA815_29422}
36. MligTC455_22050 100 2.09 Mlig455_057366

Neo: -

Age: logFC(26M/2M)=-0.498

Region-enriched R2: 3.572/0.03951

 KY 0.953 - - 0.953 - - - Mlig455_057366 {REF} {Length: 4912} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=91.7, Expect=2e-18]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=88.6, Expect=1e-17]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=91.3, Expect=1e-18]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=99.8, Expect=3e-21]} {RNA1509_17146} {RNA1310_7357.1} {RNA815_2394.1}
37. MligTC455_37459 241 5.03 Mlig455_016238

Neo: -

Age: -

 MFSD3 0.953 - 0.953 - - - - Mlig455_016238 {REF} {Length: 2553} {Pfam: Major Facilitator Superfamily [PF07690.18, score=48.5]; Acetyl-coenzyme A transporter 1 [PF13000.9, score=36.9]} {Human: ENSG00000167700, MFSD3, major facilitator superfamily domain containing 3, [RH, Score=188, Expect=1e-54]} {Mouse: ENSMUSG00000019080, Mfsd3, major facilitator superfamily domain containing 3, [RH, Score=211, Expect=2e-63]} {Dmel: FBgn0036662, CG9706, [Score=53.1, Expect=3e-07]} {Celegans: WBGene00012033, T26C5.3, [Score=50.8, Expect=1e-06]} {Smed: dd_Smed_v6_18318_0_1, dd_Smed_v6_18318_0_1, [RH, Score=299, Expect=7e-98]} {RNA1509_41389} {RNA1310_7558, RNA1509_41389} {RNA1509_41389, RNA815_19511}
38. MligTC455_52490 75 1.56 Mlig455_032889

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_032889 {REF} {Length: 1217} {RNA1509_31700} {RNA1310_225.1} {RNA815_107.1}
39. MligTC455_13954 22 0.45 Mlig455_039995, Mlig455_040010

Neo: -

Age: -

 0.952 - - 0.952 - - -

Mlig455_039995 {REF} {Length: 1630} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=21.0]} {RNA1310_76651} {RNA815_46201}

Mlig455_040010 {REF} {Length: 1667} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=22.2]} {RNA1310_76651} {RNA815_46201}
40. MligTC455_17209 14 0.3 Mlig455_005564

Neo: -

Age: -

 FCN1 0.952 - - 0.952 - - - Mlig455_005564 {REF} {Length: 1971} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=137.2]} {Human: ENSG00000085265, FCN1, ficolin 1, [Score=114, Expect=7e-29]; ENSG00000142748, FCN3, ficolin 3, [Score=110, Expect=8e-28]} {Mouse: ENSMUSG00000026835, Fcnb, ficolin B, [Score=114, Expect=3e-29]; ENSMUSG00000026938, Fcna, ficolin A, [Score=112, Expect=2e-28]} {Dmel: FBgn0033312, CG8642, [Score=83.2, Expect=9e-18]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=75.9, Expect=2e-15]} {RNA1310_45677.1} {RNA815_24869}
41. MligTC455_25636 134 2.79 Mlig455_007188

Neo: -

Age: logFC(26M/2M)=1.938

 EEF2 0.952 - - 0.952 - - - Mlig455_007188 {REF} {Length: 2594} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=124.2]; Elongation factor G, domain IV [PF03764.20, score=112.5]; Elongation factor G C-terminus [PF00679.26, score=54.3]; Elongation Factor G, domain III [PF14492.8, score=52.5]; Elongation factor Tu domain 2 [PF03144.27, score=32.9]} {Human: ENSG00000167658, EEF2, eukaryotic translation elongation factor 2, [Score=1065, Expect=0.0]} {Mouse: ENSMUSG00000034994, Eef2, eukaryotic translation elongation factor 2, [Score=1066, Expect=0.0]} {Dmel: FBgn0000559, eEF2, eukaryotic translation elongation factor 2, [Score=1058, Expect=0.0]} {Celegans: WBGene00001167, eef-2, Elongation factor 2, [Score=1092, Expect=0.0]} {Smed: dd_Smed_v6_186_0_1, dd_Smed_v6_186_0_1, [Score=1070, Expect=0.0]} {RNA1509_21612} {RNA1310_4133} {RNA815_1555.2}
42. MligTC455_15078 100 2.09 Mlig455_026705

Neo: -

Age: Down-Up-Down

 B3GNT6 0.951 - - 0.951 - - - Mlig455_026705 {REF} {Length: 2083} {Pfam: Galactosyltransferase [PF01762.23, score=135.8]} {Human: ENSG00000198488, B3GNT6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6, [Score=118, Expect=2e-28]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=114, Expect=3e-27]} {Dmel: FBgn0035558, CG11357, [Score=146, Expect=3e-38]} {Celegans: WBGene00000270, bre-5, Beta-1,3-galactosyltransferase bre-5, [Score=68.9, Expect=2e-12]} {Smed: dd_Smed_v6_4748_0_1, dd_Smed_v6_4748_0_1, [Score=246, Expect=8e-77]} {RNA1509_8878} {RNA1310_13373} {RNA815_4876}
43. MligTC455_16334 23 0.47 Mlig455_048897

Neo: -

Age: -

 GABBR2 0.951 - - 0.951 - - - Mlig455_048897 {REF} {Length: 2632} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=156.6]; Receptor family ligand binding region [PF01094.30, score=109.3]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=307, Expect=2e-91]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=306, Expect=2e-91]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=267, Expect=5e-76]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=234, Expect=4e-66]} {Smed: dd_Smed_v6_51663_0_1, dd_Smed_v6_51663_0_1, [Score=129, Expect=2e-33]} {RNA1509_38426} {RNA1310_30172} {RNA815_43578}
44. MligTC455_16945 280 5.83 Mlig455_066663

Neo: -

Age: -

 0.951 - 0.951 - - - - Mlig455_066663 {REF} {Length: 3888} {RNA1509_16283} {RNA1310_4864.1} {RNA815_4194.1}
45. MligTC455_49628 82 1.7 Mlig455_043447

Neo: -

Age: -

 SLC16A12 0.951 - - - - - 0.951 Mlig455_043447 {REF} {Length: 5313} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=105.0]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=114, Expect=5e-26]; ENSG00000163053, SLC16A14, solute carrier family 16 member 14, [Score=114, Expect=5e-26]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=118, Expect=1e-27]} {Dmel: FBgn0035173, CG13907, [Score=336, Expect=9e-103]} {Celegans: WBGene00003986, mct-4, MonoCarboxylate Transporter family, [Score=295, Expect=8e-89]} {Smed: dd_Smed_v6_10147_0_4, dd_Smed_v6_10147_0_4, [RH, Score=409, Expect=2e-128]} {RNA1509_13827, RNA1509_17254, RNA1509_27907} {RNA1310_5615, RNA1509_13827, RNA1509_17254, RNA1509_27907} {RNA1509_13827, RNA1509_17254, RNA1509_27907, RNA815_8392}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA