Data search
Results for MligTC455_22822
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22822 | 12705 | 264.68 | Mlig455_004132, Mlig455_060459 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.461 |
PSMB4 | Mlig455_004132 {REF} {Length: 1723} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=86.1]} {Human: ENSG00000159377, PSMB4, proteasome subunit beta 4, [RH, Score=233, Expect=3e-76]} {Mouse: ENSMUSG00000005779, Psmb4, proteasome (prosome, macropain) subunit, beta type 4, [RH, Score=236, Expect=1e-77]} {Dmel: FBgn0250746, Prosbeta7, Proteasome beta7 subunit, [RH, Score=162, Expect=1e-48]} {Celegans: WBGene00003953, pbs-7, Proteasome subunit beta, [RH, Score=138, Expect=5e-40]} {Smed: dd_Smed_v6_1669_0_1, dd_Smed_v6_1669_0_1, [RH, Score=206, Expect=6e-67]} {RNA1509_2076} {RNA1310_22715.1} {RNA815_9146.1} Mlig455_060459 {REF} {Length: 1623} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=86.1]} {Human: ENSG00000159377, PSMB4, proteasome subunit beta 4, [RH, Score=233, Expect=3e-76]} {Mouse: ENSMUSG00000005779, Psmb4, proteasome (prosome, macropain) subunit, beta type 4, [RH, Score=236, Expect=1e-77]} {Dmel: FBgn0250746, Prosbeta7, Proteasome beta7 subunit, [RH, Score=162, Expect=1e-48]} {Celegans: WBGene00003953, pbs-7, Proteasome subunit beta, [RH, Score=138, Expect=5e-40]} {Smed: dd_Smed_v6_1669_0_1, dd_Smed_v6_1669_0_1, [RH, Score=206, Expect=6e-67]} {RNA1509_2076, RNA1509_51743} {RNA1310_22715.1, RNA1509_51743} {RNA1509_51743, RNA815_9146.1} |
Cumulative graph for MligTC455_22822
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.498 | 8.152 | 0.13233 | 0.73154 | |
| RegionR2 | 0.111 | 8.152 | 0.61276 | 0.95982 | |
| RegionR3 | -0.075 | 8.152 | 0.69448 | 1.00000 | |
| RegionR4 | 0.573 | 8.152 | 0.00583 | 0.04091 | |
| RegionR5 | 0.545 | 8.152 | 0.00187 | 0.01658 | |
| RegionR6 | 0.122 | 8.152 | 0.51753 | 1.00000 | |
| RegionR7 | -0.115 | 8.152 | 0.57341 | 1.00000 | |
| RegionR8 | -0.663 | 8.152 | 0.00821 | 0.16882 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.557 | 8.152 | 0.00177 | 0.22113 | |
| RegenerationR2 | -0.35 | 8.152 | 0.13136 | 0.55708 | |
| RegenerationR3 | 0.075 | 8.152 | 0.75139 | 0.96501 | |
| RegenerationR4 | -0.346 | 8.152 | 0.15223 | 0.58144 | |
| RegenerationR5 | -0.198 | 8.152 | 0.39437 | 0.79492 | |
| RegenerationR6 | 0.156 | 8.152 | 0.50766 | 0.81164 | |
| RegenerationBL | 0.681 | 8.152 | 0.00125 | 0.02653 | |
| RegenerationTP | 0.634 | 8.152 | 0.00669 | 0.13805 |
Genes with expression patterns similar to MligTC455_22822
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_22822 | 12705 | 264.68 | Mlig455_004132, Mlig455_060459 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.461 |
PSMB4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_004132 {REF} {Length: 1723} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=86.1]} {Human: ENSG00000159377, PSMB4, proteasome subunit beta 4, [RH, Score=233, Expect=3e-76]} {Mouse: ENSMUSG00000005779, Psmb4, proteasome (prosome, macropain) subunit, beta type 4, [RH, Score=236, Expect=1e-77]} {Dmel: FBgn0250746, Prosbeta7, Proteasome beta7 subunit, [RH, Score=162, Expect=1e-48]} {Celegans: WBGene00003953, pbs-7, Proteasome subunit beta, [RH, Score=138, Expect=5e-40]} {Smed: dd_Smed_v6_1669_0_1, dd_Smed_v6_1669_0_1, [RH, Score=206, Expect=6e-67]} {RNA1509_2076} {RNA1310_22715.1} {RNA815_9146.1} Mlig455_060459 {REF} {Length: 1623} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=86.1]} {Human: ENSG00000159377, PSMB4, proteasome subunit beta 4, [RH, Score=233, Expect=3e-76]} {Mouse: ENSMUSG00000005779, Psmb4, proteasome (prosome, macropain) subunit, beta type 4, [RH, Score=236, Expect=1e-77]} {Dmel: FBgn0250746, Prosbeta7, Proteasome beta7 subunit, [RH, Score=162, Expect=1e-48]} {Celegans: WBGene00003953, pbs-7, Proteasome subunit beta, [RH, Score=138, Expect=5e-40]} {Smed: dd_Smed_v6_1669_0_1, dd_Smed_v6_1669_0_1, [RH, Score=206, Expect=6e-67]} {RNA1509_2076, RNA1509_51743} {RNA1310_22715.1, RNA1509_51743} {RNA1509_51743, RNA815_9146.1} |
| 2. | MligTC455_39658 | 2213 | 46.1 | Mlig455_048637 | Neo: Neoblast Age: logFC(26M/2M)=0.186 |
PSMA4 | 2.443 | - | - | 0.952 | - | 0.753 | 0.738 | Mlig455_048637 {REF} {Length: 1244} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=126.7]} {Human: ENSG00000041357, PSMA4, proteasome subunit alpha 4, [Score=216, Expect=8e-72]} {Mouse: ENSMUSG00000032301, Psma4, proteasome (prosome, macropain) subunit, alpha type 4, [Score=215, Expect=1e-70]} {Dmel: FBgn0261394, Prosalpha3, Proteasome alpha3 subunit, [Score=171, Expect=2e-53]} {Celegans: WBGene00003924, pas-3, Proteasome subunit alpha type-4, [Score=163, Expect=9e-51]} {Smed: dd_Smed_v6_1541_0_1, dd_Smed_v6_1541_0_1, [Score=220, Expect=3e-73]} {RNA1509_1384, RNA1509_15286} {RNA1310_28223.1, RNA1509_1384, RNA1509_15286} {RNA1509_1384, RNA1509_15286, RNA815_9797} |
| 3. | MligTC455_23659 | 3246 | 67.62 | Mlig455_028388 | Neo: Int S/G2/M Age: - |
NEDD8 | 1.804 | - | - | 0.853 | - | - | 0.951 | Mlig455_028388 {REF} {Length: 690} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=90.3]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=58.5]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=21.1]; Ubiquitin-like domain [PF14560.8, score=20.7]} {Human: ENSG00000285246, NEDD8, neural precursor cell expressed, developmentally down-regulated 8, [RH, Score=134, Expect=1e-42]; ENSG00000129559, NEDD8, neural precursor cell expressed, developmentally down-regulated 8, [RH, Score=134, Expect=1e-42]} {Mouse: ENSMUSG00000010376, Nedd8, neural precursor cell expressed, developmentally down-regulated gene 8, [RH, Score=119, Expect=7e-37]} {Dmel: FBgn0032725, Nedd8, [RH, Score=134, Expect=1e-42]} {Celegans: WBGene00003587, ned-8, NEDD8, [RH, Score=132, Expect=3e-42]} {Smed: dd_Smed_v6_403_0_1, dd_Smed_v6_403_0_1, [RH, Score=133, Expect=1e-42]} {RNA1509_4548} {RNA1310_34741} {RNA815_23503} |
| 4. | MligTC455_49148 | 2777 | 57.85 | Mlig455_041348 | Neo: Int S/G2/M Age: Down-Up-Down |
PSMC3 | 1.739 | - | - | 0.783 | 0.956 | - | - | Mlig455_041348 {REF} {Length: 2082} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=141.8]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=53.6]; AAA+ lid domain [PF17862.3, score=42.0]; AAA ATPase domain [PF13191.8, score=27.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=25.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=23.1]; AAA domain (Cdc48 subfamily) [PF07724.16, score=21.0]; AAA domain [PF13401.8, score=20.5]; Protein of unknown function (DUF815) [PF05673.15, score=18.4]} {Human: ENSG00000165916, PSMC3, proteasome 26S subunit, ATPase 3, [RH, Score=739, Expect=0.0]} {Mouse: ENSMUSG00000002102, Psmc3, proteasome (prosome, macropain) 26S subunit, ATPase 3, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0028684, Rpt5, Regulatory particle triple-A ATPase 5, [RH, Score=728, Expect=0.0]} {Celegans: WBGene00004505, rpt-5, Proteasome Regulatory Particle, ATPase-like, [RH, Score=704, Expect=0.0]} {Smed: dd_Smed_v6_1855_0_1, dd_Smed_v6_1855_0_1, [RH, Score=735, Expect=0.0]} {RNA1509_14202, RNA1509_1694} {RNA1310_12255, RNA1509_14202, RNA1509_1694} {RNA1509_14202, RNA1509_1694, RNA815_4834.1} |
| 5. | MligTC455_39732 | 10649 | 221.86 | Mlig455_041612, Mlig455_041634 | Neo: - Age: - Region-enriched R4: 1.069/0.00009 |
0.969 | - | - | - | 0.969 | - | - | Mlig455_041612 {REF} {Length: 822} {Pfam: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) [PF10183.11, score=31.6]} {Mouse: ENSMUSG00000061633, 1700029P11Rik, RIKEN cDNA 1700029P11 gene, [RH, Score=43.5, Expect=6e-06]} {Dmel: FBgn0027785, NP15.6, [RH, Score=65.1, Expect=3e-14]} {Celegans: WBGene00018361, F42G8.10, [RH, Score=57.4, Expect=4e-11]} {Smed: dd_Smed_v6_3593_0_1, dd_Smed_v6_3593_0_1, [Score=82.8, Expect=3e-21]} {RNA1509_30022} {RNA1310_23528} {RNA815_10893.1} Mlig455_041634 {REF} {Length: 817} {Pfam: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) [PF10183.11, score=31.6]} {Mouse: ENSMUSG00000061633, 1700029P11Rik, RIKEN cDNA 1700029P11 gene, [RH, Score=43.5, Expect=6e-06]} {Dmel: FBgn0027785, NP15.6, [RH, Score=65.1, Expect=3e-14]} {Celegans: WBGene00018361, F42G8.10, [RH, Score=57.4, Expect=4e-11]} {Smed: dd_Smed_v6_3593_0_1, dd_Smed_v6_3593_0_1, [Score=82.8, Expect=3e-21]} {RNA1509_13109} {RNA1310_23528} {RNA815_10893.1} |
|
| 6. | MligTC455_25918 | 510 | 10.62 | Mlig455_006533, Mlig455_006699 | Neo: - Age: Down-Up-Down |
0.951 | - | - | - | 0.951 | - | - | Mlig455_006533 {REF} {Length: 3296} {Pfam: NHL repeat [PF01436.23, score=26.2]} {Dmel: FBgn0265356, tn, thin, [Score=52.0, Expect=1e-06]} {RNA1509_12380} {RNA1310_21840.1} {RNA815_17174} Mlig455_006699 {REF} {Length: 658} {NoTransDecoderORF} {RNA1509_42918} {RNA1310_29427} {RNA815_19755} |