Data search
Results for MligTC455_49148
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_49148 | 2777 | 57.85 | Mlig455_041348 | Neo: Int S/G2/M Age: Down-Up-Down |
PSMC3 | Mlig455_041348 {REF} {Length: 2082} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=141.8]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=53.6]; AAA+ lid domain [PF17862.3, score=42.0]; AAA ATPase domain [PF13191.8, score=27.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=25.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=23.1]; AAA domain (Cdc48 subfamily) [PF07724.16, score=21.0]; AAA domain [PF13401.8, score=20.5]; Protein of unknown function (DUF815) [PF05673.15, score=18.4]} {Human: ENSG00000165916, PSMC3, proteasome 26S subunit, ATPase 3, [RH, Score=739, Expect=0.0]} {Mouse: ENSMUSG00000002102, Psmc3, proteasome (prosome, macropain) 26S subunit, ATPase 3, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0028684, Rpt5, Regulatory particle triple-A ATPase 5, [RH, Score=728, Expect=0.0]} {Celegans: WBGene00004505, rpt-5, Proteasome Regulatory Particle, ATPase-like, [RH, Score=704, Expect=0.0]} {Smed: dd_Smed_v6_1855_0_1, dd_Smed_v6_1855_0_1, [RH, Score=735, Expect=0.0]} {RNA1509_14202, RNA1509_1694} {RNA1310_12255, RNA1509_14202, RNA1509_1694} {RNA1509_14202, RNA1509_1694, RNA815_4834.1} |
Cumulative graph for MligTC455_49148
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.157 | 6.008 | 0.78742 | 1.00000 | |
| RegionR2 | -0.204 | 6.008 | 0.55068 | 0.91600 | |
| RegionR3 | -0.085 | 6.008 | 0.76046 | 1.00000 | |
| RegionR4 | 0.265 | 6.008 | 0.39078 | 0.71657 | |
| RegionR5 | 0.577 | 6.008 | 0.01851 | 0.09161 | |
| RegionR6 | 0.345 | 6.008 | 0.20818 | 0.78466 | |
| RegionR7 | -0.253 | 6.008 | 0.45321 | 1.00000 | |
| RegionR8 | -0.488 | 6.008 | 0.24906 | 0.86838 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.28 | 6.008 | 0.72169 | 1.00000 | |
| RegenerationR2 | 0.631 | 6.008 | 0.04650 | 0.35612 | |
| RegenerationR3 | 0.55 | 6.008 | 0.10167 | 0.50732 | |
| RegenerationR4 | 0.23 | 6.008 | 0.49634 | 0.86728 | |
| RegenerationR5 | 0.153 | 6.008 | 0.62510 | 0.92038 | |
| RegenerationR6 | 0.495 | 6.008 | 0.13043 | 0.44357 | |
| RegenerationBL | 0.937 | 6.008 | 0.00400 | 0.05670 | |
| RegenerationTP | 0.655 | 6.008 | 0.08655 | 0.46482 |
Genes with expression patterns similar to MligTC455_49148
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_49148 | 2777 | 57.85 | Mlig455_041348 | Neo: Int S/G2/M Age: Down-Up-Down |
PSMC3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_041348 {REF} {Length: 2082} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=141.8]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=53.6]; AAA+ lid domain [PF17862.3, score=42.0]; AAA ATPase domain [PF13191.8, score=27.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=25.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=23.1]; AAA domain (Cdc48 subfamily) [PF07724.16, score=21.0]; AAA domain [PF13401.8, score=20.5]; Protein of unknown function (DUF815) [PF05673.15, score=18.4]} {Human: ENSG00000165916, PSMC3, proteasome 26S subunit, ATPase 3, [RH, Score=739, Expect=0.0]} {Mouse: ENSMUSG00000002102, Psmc3, proteasome (prosome, macropain) 26S subunit, ATPase 3, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0028684, Rpt5, Regulatory particle triple-A ATPase 5, [RH, Score=728, Expect=0.0]} {Celegans: WBGene00004505, rpt-5, Proteasome Regulatory Particle, ATPase-like, [RH, Score=704, Expect=0.0]} {Smed: dd_Smed_v6_1855_0_1, dd_Smed_v6_1855_0_1, [RH, Score=735, Expect=0.0]} {RNA1509_14202, RNA1509_1694} {RNA1310_12255, RNA1509_14202, RNA1509_1694} {RNA1509_14202, RNA1509_1694, RNA815_4834.1} |
| 2. | MligTC455_53552 | 1646 | 34.28 | Mlig455_064645 | Neo: Int S/G2/M Age: - |
TMCO1 | 1.79 | - | - | 0.821 | 0.969 | - | - | Mlig455_064645 {REF} {Length: 1269} {TRANSSPLICED} {Pfam: Integral membrane protein EMC3/TMCO1-like [PF01956.18, score=134.7]; CHD5-like protein [PF04420.16, score=19.3]} {Human: ENSG00000143183, TMCO1, transmembrane and coiled-coil domains 1, [RH, Score=225, Expect=3e-75]} {Mouse: ENSMUSG00000052428, Tmco1, transmembrane and coiled-coil domains 1, [RH, Score=225, Expect=2e-75]} {Dmel: FBgn0032746, CG10470, [RH, Score=254, Expect=3e-87]} {Celegans: WBGene00009045, F22B5.10, Calcium load-activated calcium channel homolog, [RH, Score=214, Expect=2e-71]} {Smed: dd_Smed_v6_2854_0_1, dd_Smed_v6_2854_0_1, [RH, Score=280, Expect=2e-97]} {RNA1509_11030, RNA1509_29706, RNA1509_5051} {RNA1310_868, RNA1509_11030, RNA1509_29706, RNA1509_5051} {RNA1509_11030, RNA1509_29706, RNA1509_5051, RNA815_1694.1} |
| 3. | MligTC455_39471 | 1028 | 21.42 | Mlig455_036327 | Neo: - Age: - |
1.747 | - | - | - | 0.965 | - | 0.782 | Mlig455_036327 {REF} {Length: 1382} {RNA1509_44762} {RNA1310_27397} {RNA815_34470} | |
| 4. | MligTC455_22822 | 12705 | 264.68 | Mlig455_004132, Mlig455_060459 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.461 |
PSMB4 | 1.739 | - | - | 0.783 | 0.956 | - | - | Mlig455_004132 {REF} {Length: 1723} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=86.1]} {Human: ENSG00000159377, PSMB4, proteasome subunit beta 4, [RH, Score=233, Expect=3e-76]} {Mouse: ENSMUSG00000005779, Psmb4, proteasome (prosome, macropain) subunit, beta type 4, [RH, Score=236, Expect=1e-77]} {Dmel: FBgn0250746, Prosbeta7, Proteasome beta7 subunit, [RH, Score=162, Expect=1e-48]} {Celegans: WBGene00003953, pbs-7, Proteasome subunit beta, [RH, Score=138, Expect=5e-40]} {Smed: dd_Smed_v6_1669_0_1, dd_Smed_v6_1669_0_1, [RH, Score=206, Expect=6e-67]} {RNA1509_2076} {RNA1310_22715.1} {RNA815_9146.1} Mlig455_060459 {REF} {Length: 1623} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=86.1]} {Human: ENSG00000159377, PSMB4, proteasome subunit beta 4, [RH, Score=233, Expect=3e-76]} {Mouse: ENSMUSG00000005779, Psmb4, proteasome (prosome, macropain) subunit, beta type 4, [RH, Score=236, Expect=1e-77]} {Dmel: FBgn0250746, Prosbeta7, Proteasome beta7 subunit, [RH, Score=162, Expect=1e-48]} {Celegans: WBGene00003953, pbs-7, Proteasome subunit beta, [RH, Score=138, Expect=5e-40]} {Smed: dd_Smed_v6_1669_0_1, dd_Smed_v6_1669_0_1, [RH, Score=206, Expect=6e-67]} {RNA1509_2076, RNA1509_51743} {RNA1310_22715.1, RNA1509_51743} {RNA1509_51743, RNA815_9146.1} |
| 5. | MligTC455_46139 | 983 | 20.47 | Mlig455_002906 | Neo: - Age: - Region-enriched R4: 1.656/0.03277 |
TMUB1 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_002906 {REF} {Length: 3194} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=32.7]} {Human: ENSG00000164897, TMUB1, transmembrane and ubiquitin like domain containing 1, [RH, Score=76.6, Expect=3e-15]} {Mouse: ENSMUSG00000028958, Tmub1, transmembrane and ubiquitin-like domain containing 1, [RH, Score=79.3, Expect=3e-16]} {Smed: dd_Smed_v6_5590_0_1, dd_Smed_v6_5590_0_1, [RH, Score=132, Expect=3e-35]} {RNA1509_27877, RNA1509_30638, RNA1509_43728, RNA1509_5737} {RNA1310_3418.1, RNA1509_27877, RNA1509_30638, RNA1509_43728, RNA1509_5737} {RNA1509_27877, RNA1509_30638, RNA1509_43728, RNA1509_5737, RNA815_1023} |
| 6. | MligTC455_06390 | 647 | 13.47 | Mlig455_048447 | Neo: - Age: - Region-enriched R5: 1.418/0.00005 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_048447 {REF} {Length: 751} {NoTransDecoderORF} {RNA1509_18629} {RNA1310_48236} {RNA815_27499} |
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