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Results for MligTC455_22937

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22937 308 6.41 Mlig455_008400, Mlig455_008416, Mlig455_064835

Neo: -

Age: Up-Down-Up

Mlig455_008400 {REF} {Length: 2108} {RNA1509_17921} {RNA1310_13833.1} {RNA815_29396}

Mlig455_008416 {REF} {Length: 9323} {RNA1509_34349} {RNA1310_9875.1, RNA1509_34349} {RNA1509_34349, RNA815_18034}

Mlig455_064835 {REF} {Length: 2479} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=125.4]; RNase H [PF00075.26, score=47.5]} {RNA1509_50041} {RNA1310_1401} {RNA815_252.1}

Cumulative graph for MligTC455_22937

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.699 3.295 0.95920 1.00000
RegionR2 2.24 3.295 0.00861 0.09181
RegionR3 0.936 3.295 0.22214 0.76436
RegionR4 -0.99 3.295 0.97975 1.00000
RegionR5 1.062 3.295 0.12587 0.35792
RegionR6 1.61 3.295 0.02292 0.27450
RegionR7 1.538 3.295 0.07887 0.54216
RegionR8 -5.697 3.295 0.04634 0.42189

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.741 3.295 0.40797 1.00000
RegenerationR2 -0.389 3.295 0.51490 0.87767
RegenerationR3 0.114 3.295 0.86817 1.00000
RegenerationR4 0.872 3.295 0.19254 0.63697
RegenerationR5 -0.252 3.295 0.67923 0.94390
RegenerationR6 -0.457 3.295 0.48529 0.79526
RegenerationBL 1.102 3.295 0.46556 0.83228
RegenerationTP 2.764 3.295 0.13178 0.54597


Genes with expression patterns similar to MligTC455_22937

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22937 308 6.41 Mlig455_008400, Mlig455_008416, Mlig455_064835

Neo: -

Age: Up-Down-Up

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_008400 {REF} {Length: 2108} {RNA1509_17921} {RNA1310_13833.1} {RNA815_29396}

Mlig455_008416 {REF} {Length: 9323} {RNA1509_34349} {RNA1310_9875.1, RNA1509_34349} {RNA1509_34349, RNA815_18034}

Mlig455_064835 {REF} {Length: 2479} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=125.4]; RNase H [PF00075.26, score=47.5]} {RNA1509_50041} {RNA1310_1401} {RNA815_252.1}
2. MligTC455_22940 125 2.6 Mlig455_008414

Neo: -

Age: -

 ERCC5 4.874 0.995 0.988 0.966 - 0.971 0.954 Mlig455_008414 {REF} {Length: 2753} {TRANSSPLICED} {Pfam: XPG I-region [PF00867.20, score=78.0]; 5'-3' exonuclease, C-terminal SAM fold [PF01367.22, score=24.2]} {Human: ENSG00000134899, ERCC5, ERCC excision repair 5, endonuclease, [RH, Score=192, Expect=1e-49]; ENSG00000270181, BIVM-ERCC5, BIVM-ERCC5 readthrough, [RH, Score=192, Expect=1e-49]} {Mouse: ENSMUSG00000026048, Ercc5, excision repair cross-complementing rodent repair deficiency, complementation group 5, [RH, Score=189, Expect=6e-49]} {Dmel: FBgn0002887, mus201, mutagen-sensitive 201, [RH, Score=179, Expect=5e-46]} {Celegans: WBGene00019004, xpg-1, XPG (Xeroderma Pigmentosum group G) DNA repair gene homolog, [RH, Score=105, Expect=6e-23]} {Smed: dd_Smed_v6_10808_0_1, dd_Smed_v6_10808_0_1, [RH, Score=189, Expect=7e-50]} {RNA1509_14172} {RNA1310_4988} {RNA815_6998}
3. MligTC455_53477 156 3.25 Mlig455_044952

Neo: Int S/G2/M

Age: Up-Down-Up

Region-enriched R4: 3.164/0.01936
Region-enriched R5: 2.913/0.00193

 1.818 0.868 - - - - 0.950 Mlig455_044952 {REF} {Length: 558} {TRANSSPLICED} {RNA1509_31514} {RNA1310_26227} {RNA815_13760}
4. MligTC455_18637 539 11.23 Mlig455_037275, Mlig455_070008

Neo: -

Age: -

 FBXO21 1.683 - - 0.952 0.731 - -

Mlig455_037275 {REF} {Length: 3075} {Pfam: Hemimethylated DNA-binding protein YccV like [PF08755.13, score=91.4]; Transglutaminase-like superfamily [PF13369.8, score=61.0]} {Human: ENSG00000135108, FBXO21, F-box protein 21, [RH, Score=137, Expect=1e-33]} {Mouse: ENSMUSG00000032898, Fbxo21, F-box protein 21, [RH, Score=135, Expect=6e-33]} {RNA1509_14786} {RNA1310_12726.1, RNA1509_14786} {RNA1509_14786, RNA815_3127}

Mlig455_070008 {REF} {Length: 2764} {Pfam: Hemimethylated DNA-binding protein YccV like [PF08755.13, score=91.4]; Transglutaminase-like superfamily [PF13369.8, score=61.0]} {Human: ENSG00000135108, FBXO21, F-box protein 21, [RH, Score=137, Expect=1e-33]} {Mouse: ENSMUSG00000032898, Fbxo21, F-box protein 21, [RH, Score=135, Expect=6e-33]} {RNA1509_14786} {RNA1310_12726.1} {RNA815_3127}
5. MligTC455_42195 52 1.09 Mlig455_002144, Mlig455_012129, Mlig455_032213, Mlig455_058246

Neo: -

Age: -

 0.969 - - - 0.969 - -

Mlig455_002144 {REF} {Length: 2645} {NoTransDecoderORF} {RNA1509_51255} {RNA1310_29619} {RNA815_31633}

Mlig455_012129 {REF} {Length: 186} {NoTransDecoderORF} {RNA1310_119298} {RNA815_55754}

Mlig455_032213 {REF} {Length: 194} {NoTransDecoderORF} {RNA1310_43603} {RNA815_55754}

Mlig455_058246 {REF} {Length: 2294} {Celegans: WBGene00015323, frpr-1, Probable G-protein coupled receptor frpr-1, [Score=47.8, Expect=8e-06]} {Smed: dd_Smed_v6_35680_0_1, dd_Smed_v6_35680_0_1, [Score=46.6, Expect=1e-05]} {RNA1310_102393} {RNA815_55754}
6. MligTC455_43073 62 1.29 Mlig455_010527

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=1.095

 0.966 - - - 0.966 - - Mlig455_010527 {REF} {Length: 2044} {TRANSSPLICED} {RNA1509_19799} {RNA1310_17065} {RNA815_4585}
7. MligTC455_30151 57 1.19 Mlig455_056422

Neo: -

Age: -

 0.965 - - - 0.965 - - Mlig455_056422 {REF} {Length: 4455} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.5]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=64.7, Expect=3e-12]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_6291.1}
8. MligTC455_27198 106 2.2 Mlig455_039551

Neo: -

Age: Up-Down-Up

 MPP7 0.959 - - - 0.959 - - Mlig455_039551 {REF} {Length: 3414} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=44.5]; Guanylate kinase [PF00625.23, score=36.4]; L27 domain [PF02828.18, score=24.6]; Variant SH3 domain [PF07653.19, score=20.4]} {Human: ENSG00000150054, MPP7, membrane palmitoylated protein 7, [Score=268, Expect=5e-82]} {Mouse: ENSMUSG00000057440, Mpp7, membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7), [Score=288, Expect=6e-90]} {Dmel: FBgn0050021, metro, menage a trois, [RH, Score=296, Expect=5e-93]} {Celegans: WBGene00021914, magu-1, MAGUK family, [Score=162, Expect=2e-43]} {Smed: dd_Smed_v6_7957_0_1, dd_Smed_v6_7957_0_1, [RH, Score=377, Expect=2e-124]} {RNA1509_59177} {RNA1310_8192} {RNA815_18062}
9. MligTC455_35409 2095 43.64 Mlig455_004509

Neo: -

Age: -

 PPP3CA 0.95 - - - 0.950 - - Mlig455_004509 {REF} {Length: 4292} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=129.1]} {Human: ENSG00000138814, PPP3CA, protein phosphatase 3 catalytic subunit alpha, [RH, Score=837, Expect=0.0]; ENSG00000107758, PPP3CB, protein phosphatase 3 catalytic subunit beta, [RH, Score=823, Expect=0.0]; ENSG00000120910, PPP3CC, protein phosphatase 3 catalytic subunit gamma, [RH, Score=800, Expect=0.0]} {Mouse: ENSMUSG00000028161, Ppp3ca, protein phosphatase 3, catalytic subunit, alpha isoform, [RH, Score=840, Expect=0.0]; ENSMUSG00000021816, Ppp3cb, protein phosphatase 3, catalytic subunit, beta isoform, [RH, Score=823, Expect=0.0]} {Dmel: FBgn0011826, Pp2B-14D, Protein phosphatase 2B at 14D, [RH, Score=846, Expect=0.0]} {Celegans: WBGene00006527, tax-6, Serine/threonine-protein phosphatase 2B catalytic subunit, [RH, Score=771, Expect=0.0]} {Smed: dd_Smed_v6_2045_0_1, dd_Smed_v6_2045_0_1, [RH, Score=674, Expect=0.0]} {RNA1509_25279, RNA1509_42566, RNA1509_9529} {RNA1310_10900, RNA1509_25279, RNA1509_42566, RNA1509_9529} {RNA1509_25279, RNA1509_42566, RNA1509_9529, RNA815_6996}
10. MligTC455_47604 279 5.82 Mlig455_019519

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_019519 {REF} {Length: 2121} {Pfam: Ribosomal protein S31e [PF17067.7, score=26.9]} {RNA1509_35991} {RNA1310_34204.1} {RNA815_38960}

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